RNA–Protein interactions for RNA: ENST00000579078.1

MIR5004-201, Transcript of microRNA 5004, humanhuman

BASIC

Gene MIR5004, Length 107 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR5004-201ENST00000579078 NISCHQ9Y2I1 1504 aa8.37□□□□□ -1.07
MIR5004-201ENST00000579078 CCDC180Q9P1Z9 1646 aa7.62□□□□□ -1.19
MIR5004-201ENST00000579078 ABCC9O60706 1549 aa7.47□□□□□ -1.21
MIR5004-201ENST00000579078 RB1CC1Q8TDY2 1594 aa7.2□□□□□ -1.26
MIR5004-201ENST00000579078 NACADO15069 1562 aa7.17□□□□□ -1.26
MIR5004-201ENST00000579078 MYO15BQ96JP2 1530 aa7.15□□□□□ -1.27
MIR5004-201ENST00000579078 UNC13AQ9UPW8 1703 aa7.05□□□□□ -1.28
MIR5004-201ENST00000579078 DNAJC5BQ9UF47 199 aa7.05□□□□□ -1.28
MIR5004-201ENST00000579078 SHROOM4Q9ULL8 1493 aa7.02□□□□□ -1.29
MIR5004-201ENST00000579078 DCAF1Q9Y4B6 1507 aa7.01□□□□□ -1.29
MIR5004-201ENST00000579078 BICRAQ9NZM4 1560 aa7.01□□□□□ -1.29
MIR5004-201ENST00000579078 ZCCHC6Q5VYS8 1495 aaKnown RBP6.95□□□□□ -1.3
MIR5004-201ENST00000579078 PABPN1Q86U42 306 aaKnown RBP eCLIP6.88□□□□□ -1.31
MIR5004-201ENST00000579078 CC2D2AQ9P2K1 1620 aa6.83□□□□□ -1.32
MIR5004-201ENST00000579078 DCAF8L2P0C7V8 631 aa6.82□□□□□ -1.32
MIR5004-201ENST00000579078 EIF4G1Q04637 1599 aaKnown RBP6.82□□□□□ -1.32
MIR5004-201ENST00000579078 SCRIBQ14160 1630 aa6.79□□□□□ -1.32
MIR5004-201ENST00000579078 CECR2Q9BXF3 1484 aa6.79□□□□□ -1.32
MIR5004-201ENST00000579078 NCAPD3P42695 1498 aa6.61□□□□□ -1.35
MIR5004-201ENST00000579078 HMGXB3Q12766 1538 aa6.59□□□□□ -1.35
MIR5004-201ENST00000579078 CUX2O14529 1486 aa6.59□□□□□ -1.36
MIR5004-201ENST00000579078 PEG3Q9GZU2 1588 aa6.57□□□□□ -1.36
MIR5004-201ENST00000579078 DNAJC5Q9H3Z4 198 aa6.56□□□□□ -1.36
MIR5004-201ENST00000579078 SMARCA2P51531 1590 aa6.56□□□□□ -1.36
MIR5004-201ENST00000579078 SMARCA4P51532 1647 aa6.54□□□□□ -1.36
MIR5004-201ENST00000579078 ATAD2BQ9ULI0 1458 aa6.54□□□□□ -1.36
MIR5004-201ENST00000579078 BAZ1AQ9NRL2 1556 aaPredicted RBP6.52□□□□□ -1.37
MIR5004-201ENST00000579078 LAMC3Q9Y6N6 1575 aa6.48□□□□□ -1.37
MIR5004-201ENST00000579078 THOC2Q8NI27 1593 aaKnown RBP6.47□□□□□ -1.37
MIR5004-201ENST00000579078 ERCC6Q03468 1493 aa6.47□□□□□ -1.37
MIR5004-201ENST00000579078 BAZ1BQ9UIG0 1483 aaKnown RBP6.46□□□□□ -1.38
MIR5004-201ENST00000579078 NESP48681 1621 aa6.42□□□□□ -1.38
MIR5004-201ENST00000579078 MROH2BQ7Z745 1585 aa6.4□□□□□ -1.38
MIR5004-201ENST00000579078 KIF21AQ7Z4S6 1674 aa6.39□□□□□ -1.39
MIR5004-201ENST00000579078 PDS5BQ9NTI5 1447 aa6.39□□□□□ -1.39
MIR5004-201ENST00000579078 WDR62O43379 1518 aa6.37□□□□□ -1.39
MIR5004-201ENST00000579078 CADPSQ9ULU8 1353 aa6.36□□□□□ -1.39
MIR5004-201ENST00000579078 MRC2Q9UBG0 1479 aa6.34□□□□□ -1.39
MIR5004-201ENST00000579078 CFTRP13569 1480 aa6.32□□□□□ -1.4
MIR5004-201ENST00000579078 WIZO95785 1651 aa6.32□□□□□ -1.4
MIR5004-201ENST00000579078 PRDM2Q13029 1718 aa6.3□□□□□ -1.4
MIR5004-201ENST00000579078 CEP164Q9UPV0 1460 aa6.29□□□□□ -1.4
MIR5004-201ENST00000579078 TOP2AP11388 1531 aaKnown RBP6.29□□□□□ -1.4
MIR5004-201ENST00000579078 FANCD2Q9BXW9 1451 aa6.28□□□□□ -1.4
MIR5004-201ENST00000579078 RSF1Q96T23 1441 aaPredicted RBP6.26□□□□□ -1.41
MIR5004-201ENST00000579078 URB2Q14146 1524 aaKnown RBP6.24□□□□□ -1.41
MIR5004-201ENST00000579078 ABCC8Q09428 1581 aa6.19□□□□□ -1.42
MIR5004-201ENST00000579078 IFT140Q96RY7 1462 aa6.19□□□□□ -1.42
MIR5004-201ENST00000579078 CCDC88BA6NC98 1476 aa6.17□□□□□ -1.42
MIR5004-201ENST00000579078 OSCARQ8IYS5 282 aa6.17□□□□□ -1.42
MIR5004-201ENST00000579078 WDR97A6NE52 1622 aa6.17□□□□□ -1.42
MIR5004-201ENST00000579078 TOPBP1Q92547 1522 aa6.16□□□□□ -1.42
MIR5004-201ENST00000579078 DNMBPQ6XZF7 1577 aa6.16□□□□□ -1.42
MIR5004-201ENST00000579078 TARBP1Q13395 1621 aaKnown RBP6.15□□□□□ -1.42
MIR5004-201ENST00000579078 EIF4G3O43432 1585 aaKnown RBP6.14□□□□□ -1.43
MIR5004-201ENST00000579078 RIMBP3CA6NJZ7 1639 aa6.14□□□□□ -1.43
MIR5004-201ENST00000579078 RIMBP3BA6NNM3 1639 aa6.14□□□□□ -1.43
MIR5004-201ENST00000579078 RIMBP3Q9UFD9 1639 aa6.14□□□□□ -1.43
MIR5004-201ENST00000579078 ARHGEF11O15085 1522 aa6.13□□□□□ -1.43
MIR5004-201ENST00000579078 ZNF608Q9ULD9 1512 aaPredicted RBP6.13□□□□□ -1.43
MIR5004-201ENST00000579078 POLA1P09884 1462 aaPredicted RBP6.1□□□□□ -1.43
MIR5004-201ENST00000579078 TRIM41Q8WV44 630 aa6.1□□□□□ -1.43
MIR5004-201ENST00000579078 CHD1O14646 1710 aa6.1□□□□□ -1.43
MIR5004-201ENST00000579078 CLASP1Q7Z460 1538 aa6.07□□□□□ -1.44
MIR5004-201ENST00000579078 MAGI1Q96QZ7 1491 aaPredicted RBP6.06□□□□□ -1.44
MIR5004-201ENST00000579078 AQRO60306 1485 aaKnown RBP eCLIP6.05□□□□□ -1.44
MIR5004-201ENST00000579078 ARAP1Q96P48 1450 aa6.05□□□□□ -1.44
MIR5004-201ENST00000579078 CUX1P39880 1505 aa6.04□□□□□ -1.44
MIR5004-201ENST00000579078 FGD5Q6ZNL6 1462 aa6.03□□□□□ -1.44
MIR5004-201ENST00000579078 SYNJ1O43426 1573 aa6.03□□□□□ -1.44
MIR5004-201ENST00000579078 ABCA5Q8WWZ7 1642 aa6.03□□□□□ -1.44
MIR5004-201ENST00000579078 SYNJ2O15056 1496 aa6.02□□□□□ -1.44
MIR5004-201ENST00000579078 GRIN2BQ13224 1484 aa6.02□□□□□ -1.44
MIR5004-201ENST00000579078 SOGA1O94964 1423 aa6.02□□□□□ -1.45
MIR5004-201ENST00000579078 RAD54L2Q9Y4B4 1467 aa6.02□□□□□ -1.45
MIR5004-201ENST00000579078 PBRM1Q86U86 1689 aa6.01□□□□□ -1.45
MIR5004-201ENST00000579078 ABCA10Q8WWZ4 1543 aa6.01□□□□□ -1.45
MIR5004-201ENST00000579078 SNAPC4Q5SXM2 1469 aa6.01□□□□□ -1.45
MIR5004-201ENST00000579078 TDRD9Q8NDG6 1382 aaKnown RBP5.98□□□□□ -1.45
MIR5004-201ENST00000579078 SHROOM2Q13796 1616 aa5.98□□□□□ -1.45
MIR5004-201ENST00000579078 BIVM-ERCC5R4GMW8 1640 aa5.98□□□□□ -1.45
MIR5004-201ENST00000579078 GAPVD1Q14C86 1478 aa5.97□□□□□ -1.45
MIR5004-201ENST00000579078 TOP2BQ02880 1626 aa5.96□□□□□ -1.45
MIR5004-201ENST00000579078 CYB5RLQ6IPT4 315 aa5.96□□□□□ -1.46
MIR5004-201ENST00000579078 NUP160Q12769 1436 aa5.96□□□□□ -1.46
MIR5004-201ENST00000579078 ADAMTS12P58397 1594 aa5.96□□□□□ -1.46
MIR5004-201ENST00000579078 ERICH3Q5RHP9 1530 aa5.95□□□□□ -1.46
MIR5004-201ENST00000579078 GRIN2AQ12879 1464 aa5.95□□□□□ -1.46
MIR5004-201ENST00000579078 WRNQ14191 1432 aaPredicted RBP eCLIP5.94□□□□□ -1.46
MIR5004-201ENST00000579078 CHMP7Q8WUX9 453 aaPredicted RBP5.93□□□□□ -1.46
MIR5004-201ENST00000579078 CEP170Q5SW79 1584 aa5.93□□□□□ -1.46
MIR5004-201ENST00000579078 FHAD1B1AJZ9 1412 aa5.91□□□□□ -1.46
MIR5004-201ENST00000579078 FBLN2P98095 1184 aa5.91□□□□□ -1.46
MIR5004-201ENST00000579078 ERCC6L2Q5T890 1561 aa5.89□□□□□ -1.47
MIR5004-201ENST00000579078 RUSC2Q8N2Y8 1516 aa5.89□□□□□ -1.47
MIR5004-201ENST00000579078 KIF13AQ9H1H9 1805 aa5.88□□□□□ -1.47
MIR5004-201ENST00000579078 MAPKBP1O60336 1514 aa5.88□□□□□ -1.47
MIR5004-201ENST00000579078 TRHP20396 242 aaPredicted RBP5.87□□□□□ -1.47
MIR5004-201ENST00000579078 CUL7Q14999 1698 aa5.85□□□□□ -1.47
MIR5004-201ENST00000579078 KIAA0586Q9BVV6 1533 aa5.84□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms