RNA–Protein interactions for RNA: ENST00000579060.5

NEK8-203, Transcript of NIMA related kinase 8, humanhuman

TSL 3

Gene NEK8, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK8-203ENST00000579060 NISCHQ9Y2I1 1504 aa41.9■■■■■ 4.3
NEK8-203ENST00000579060 ABCC9O60706 1549 aa37.87■■■■□ 3.65
NEK8-203ENST00000579060 CCDC180Q9P1Z9 1646 aa37.61■■■■□ 3.61
NEK8-203ENST00000579060 RB1CC1Q8TDY2 1594 aa35.83■■■■□ 3.33
NEK8-203ENST00000579060 DNAJC5BQ9UF47 199 aa35.78■■■■□ 3.32
NEK8-203ENST00000579060 NACADO15069 1562 aa35.54■■■■□ 3.28
NEK8-203ENST00000579060 DCAF8L2P0C7V8 631 aa35.38■■■■□ 3.25
NEK8-203ENST00000579060 UNC13AQ9UPW8 1703 aa35.31■■■■□ 3.24
NEK8-203ENST00000579060 PABPN1Q86U42 306 aaKnown RBP eCLIP35.25■■■■□ 3.23
NEK8-203ENST00000579060 BICRAQ9NZM4 1560 aa35.01■■■■□ 3.2
NEK8-203ENST00000579060 MYO15BQ96JP2 1530 aa34.95■■■■□ 3.19
NEK8-203ENST00000579060 ZCCHC6Q5VYS8 1495 aaKnown RBP34.71■■■■□ 3.15
NEK8-203ENST00000579060 DCAF1Q9Y4B6 1507 aa34.49■■■■□ 3.11
NEK8-203ENST00000579060 SCRIBQ14160 1630 aa34.41■■■■□ 3.1
NEK8-203ENST00000579060 CC2D2AQ9P2K1 1620 aa34.19■■■■□ 3.06
NEK8-203ENST00000579060 SHROOM4Q9ULL8 1493 aa34.17■■■■□ 3.06
NEK8-203ENST00000579060 EIF4G1Q04637 1599 aaKnown RBP34.06■■■■□ 3.04
NEK8-203ENST00000579060 CECR2Q9BXF3 1484 aa34.05■■■■□ 3.04
NEK8-203ENST00000579060 NCAPD3P42695 1498 aa32.84■■■□□ 2.85
NEK8-203ENST00000579060 ATAD2BQ9ULI0 1458 aa32.79■■■□□ 2.84
NEK8-203ENST00000579060 SMARCA4P51532 1647 aa32.75■■■□□ 2.83
NEK8-203ENST00000579060 DNAJC5Q9H3Z4 198 aa32.73■■■□□ 2.83
NEK8-203ENST00000579060 HMGXB3Q12766 1538 aa32.59■■■□□ 2.81
NEK8-203ENST00000579060 NESP48681 1621 aa32.58■■■□□ 2.81
NEK8-203ENST00000579060 SMARCA2P51531 1590 aa32.58■■■□□ 2.81
NEK8-203ENST00000579060 ERCC6Q03468 1493 aa32.55■■■□□ 2.8
NEK8-203ENST00000579060 CUX2O14529 1486 aa32.52■■■□□ 2.8
NEK8-203ENST00000579060 BAZ1AQ9NRL2 1556 aaPredicted RBP32.45■■■□□ 2.79
NEK8-203ENST00000579060 BAZ1BQ9UIG0 1483 aaKnown RBP32.41■■■□□ 2.78
NEK8-203ENST00000579060 MROH2BQ7Z745 1585 aa32.38■■■□□ 2.77
NEK8-203ENST00000579060 PEG3Q9GZU2 1588 aa32.37■■■□□ 2.77
NEK8-203ENST00000579060 THOC2Q8NI27 1593 aaKnown RBP32.22■■■□□ 2.75
NEK8-203ENST00000579060 KIF21AQ7Z4S6 1674 aa32.15■■■□□ 2.74
NEK8-203ENST00000579060 LAMC3Q9Y6N6 1575 aa32.11■■■□□ 2.73
NEK8-203ENST00000579060 WIZO95785 1651 aa32.02■■■□□ 2.72
NEK8-203ENST00000579060 PDS5BQ9NTI5 1447 aa31.85■■■□□ 2.69
NEK8-203ENST00000579060 CADPSQ9ULU8 1353 aa31.82■■■□□ 2.69
NEK8-203ENST00000579060 MRC2Q9UBG0 1479 aa31.69■■■□□ 2.66
NEK8-203ENST00000579060 WDR62O43379 1518 aa31.66■■■□□ 2.66
NEK8-203ENST00000579060 RSF1Q96T23 1441 aaPredicted RBP31.59■■■□□ 2.65
NEK8-203ENST00000579060 FANCD2Q9BXW9 1451 aa31.52■■■□□ 2.64
NEK8-203ENST00000579060 CEP164Q9UPV0 1460 aa31.52■■■□□ 2.64
NEK8-203ENST00000579060 TOP2AP11388 1531 aaKnown RBP31.47■■■□□ 2.63
NEK8-203ENST00000579060 CFTRP13569 1480 aa31.46■■■□□ 2.63
NEK8-203ENST00000579060 URB2Q14146 1524 aaKnown RBP31.37■■■□□ 2.61
NEK8-203ENST00000579060 TRIM41Q8WV44 630 aa31.29■■■□□ 2.6
NEK8-203ENST00000579060 PRDM2Q13029 1718 aa31.21■■■□□ 2.59
NEK8-203ENST00000579060 CCDC88BA6NC98 1476 aa31.16■■■□□ 2.58
NEK8-203ENST00000579060 ZNF608Q9ULD9 1512 aaPredicted RBP31.03■■■□□ 2.56
NEK8-203ENST00000579060 OSCARQ8IYS5 282 aa30.98■■■□□ 2.55
NEK8-203ENST00000579060 TOPBP1Q92547 1522 aa30.94■■■□□ 2.54
NEK8-203ENST00000579060 IFT140Q96RY7 1462 aa30.87■■■□□ 2.53
NEK8-203ENST00000579060 RIMBP3CA6NJZ7 1639 aa30.8■■■□□ 2.52
NEK8-203ENST00000579060 RIMBP3BA6NNM3 1639 aa30.8■■■□□ 2.52
NEK8-203ENST00000579060 RIMBP3Q9UFD9 1639 aa30.8■■■□□ 2.52
NEK8-203ENST00000579060 EIF4G3O43432 1585 aaKnown RBP30.8■■■□□ 2.52
NEK8-203ENST00000579060 DNMBPQ6XZF7 1577 aa30.78■■■□□ 2.52
NEK8-203ENST00000579060 TARBP1Q13395 1621 aaKnown RBP30.73■■■□□ 2.51
NEK8-203ENST00000579060 AQRO60306 1485 aaKnown RBP eCLIP30.68■■■□□ 2.5
NEK8-203ENST00000579060 CHD1O14646 1710 aa30.65■■■□□ 2.5
NEK8-203ENST00000579060 ARHGEF11O15085 1522 aa30.64■■■□□ 2.5
NEK8-203ENST00000579060 ABCC8Q09428 1581 aa30.64■■■□□ 2.5
NEK8-203ENST00000579060 POLA1P09884 1462 aaPredicted RBP30.62■■■□□ 2.49
NEK8-203ENST00000579060 RAD54L2Q9Y4B4 1467 aa30.58■■■□□ 2.49
NEK8-203ENST00000579060 TDRD9Q8NDG6 1382 aaKnown RBP30.44■■■□□ 2.46
NEK8-203ENST00000579060 CUX1P39880 1505 aa30.42■■■□□ 2.46
NEK8-203ENST00000579060 FGD5Q6ZNL6 1462 aa30.41■■■□□ 2.46
NEK8-203ENST00000579060 SOGA1O94964 1423 aa30.4■■■□□ 2.46
NEK8-203ENST00000579060 ARAP1Q96P48 1450 aa30.38■■■□□ 2.45
NEK8-203ENST00000579060 FBLN2P98095 1184 aa30.38■■■□□ 2.45
NEK8-203ENST00000579060 CYB5RLQ6IPT4 315 aa30.37■■■□□ 2.45
NEK8-203ENST00000579060 SNAPC4Q5SXM2 1469 aa30.33■■■□□ 2.45
NEK8-203ENST00000579060 WDR97A6NE52 1622 aa30.27■■■□□ 2.44
NEK8-203ENST00000579060 CLASP1Q7Z460 1538 aa30.23■■■□□ 2.43
NEK8-203ENST00000579060 PBRM1Q86U86 1689 aa30.15■■■□□ 2.42
NEK8-203ENST00000579060 GRIN2BQ13224 1484 aa30.13■■■□□ 2.41
NEK8-203ENST00000579060 MAGI1Q96QZ7 1491 aaPredicted RBP30.13■■■□□ 2.41
NEK8-203ENST00000579060 CHMP7Q8WUX9 453 aaPredicted RBP30.08■■■□□ 2.41
NEK8-203ENST00000579060 SYNJ1O43426 1573 aa30.07■■■□□ 2.4
NEK8-203ENST00000579060 SUPT5HO00267 1087 aaKnown RBP30.07■■■□□ 2.4
NEK8-203ENST00000579060 SYNJ2O15056 1496 aa30.06■■■□□ 2.4
NEK8-203ENST00000579060 ABCA5Q8WWZ7 1642 aa30.04■■■□□ 2.4
NEK8-203ENST00000579060 GAPVD1Q14C86 1478 aa30.04■■■□□ 2.4
NEK8-203ENST00000579060 TRHP20396 242 aaPredicted RBP30.02■■■□□ 2.4
NEK8-203ENST00000579060 ABCA10Q8WWZ4 1543 aa30■■■□□ 2.39
NEK8-203ENST00000579060 ERCC6L2Q5T890 1561 aa29.9■■■□□ 2.38
NEK8-203ENST00000579060 BIVM-ERCC5R4GMW8 1640 aa29.85■■■□□ 2.37
NEK8-203ENST00000579060 ADAMTS12P58397 1594 aa29.82■■■□□ 2.36
NEK8-203ENST00000579060 TOP2BQ02880 1626 aa29.81■■■□□ 2.36
NEK8-203ENST00000579060 CEP170Q5SW79 1584 aa29.8■■■□□ 2.36
NEK8-203ENST00000579060 GRIN2AQ12879 1464 aa29.8■■■□□ 2.36
NEK8-203ENST00000579060 WRNQ14191 1432 aaPredicted RBP eCLIP29.77■■■□□ 2.36
NEK8-203ENST00000579060 NUP160Q12769 1436 aa29.71■■■□□ 2.35
NEK8-203ENST00000579060 SHROOM2Q13796 1616 aa29.64■■■□□ 2.34
NEK8-203ENST00000579060 FHAD1B1AJZ9 1412 aa29.62■■■□□ 2.33
NEK8-203ENST00000579060 ERICH3Q5RHP9 1530 aa29.58■■■□□ 2.33
NEK8-203ENST00000579060 PRG4Q92954 1404 aaPredicted RBP29.42■■■□□ 2.3
NEK8-203ENST00000579060 RUSC2Q8N2Y8 1516 aa29.41■■■□□ 2.3
NEK8-203ENST00000579060 KIF13AQ9H1H9 1805 aa29.41■■■□□ 2.3
NEK8-203ENST00000579060 JPH4Q96JJ6 628 aa29.35■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms