RNA–Protein interactions for RNA: ENST00000578910.1

CCDC57-212, Transcript of coiled-coil domain containing 57, humanhuman

TSL 5

Gene CCDC57, Length 796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-212ENST00000578910 NISCHQ9Y2I1 1504 aa35.87■■■■□ 3.33
CCDC57-212ENST00000578910 CCDC180Q9P1Z9 1646 aa31.93■■■□□ 2.7
CCDC57-212ENST00000578910 ABCC9O60706 1549 aa31.79■■■□□ 2.68
CCDC57-212ENST00000578910 DCAF8L2P0C7V8 631 aa30.35■■■□□ 2.45
CCDC57-212ENST00000578910 RB1CC1Q8TDY2 1594 aa30.31■■■□□ 2.44
CCDC57-212ENST00000578910 NACADO15069 1562 aa30.19■■■□□ 2.42
CCDC57-212ENST00000578910 MYO15BQ96JP2 1530 aa29.86■■■□□ 2.37
CCDC57-212ENST00000578910 PABPN1Q86U42 306 aaKnown RBP eCLIP29.76■■■□□ 2.35
CCDC57-212ENST00000578910 ZCCHC6Q5VYS8 1495 aaKnown RBP29.74■■■□□ 2.35
CCDC57-212ENST00000578910 DNAJC5BQ9UF47 199 aa29.69■■■□□ 2.34
CCDC57-212ENST00000578910 UNC13AQ9UPW8 1703 aa29.6■■■□□ 2.33
CCDC57-212ENST00000578910 DCAF1Q9Y4B6 1507 aa29.59■■■□□ 2.33
CCDC57-212ENST00000578910 BICRAQ9NZM4 1560 aa29.44■■■□□ 2.3
CCDC57-212ENST00000578910 SCRIBQ14160 1630 aa29.18■■■□□ 2.26
CCDC57-212ENST00000578910 SHROOM4Q9ULL8 1493 aa28.97■■■□□ 2.23
CCDC57-212ENST00000578910 EIF4G1Q04637 1599 aaKnown RBP28.68■■■□□ 2.18
CCDC57-212ENST00000578910 CC2D2AQ9P2K1 1620 aa28.68■■■□□ 2.18
CCDC57-212ENST00000578910 CECR2Q9BXF3 1484 aa28.58■■■□□ 2.17
CCDC57-212ENST00000578910 NCAPD3P42695 1498 aa27.93■■■□□ 2.06
CCDC57-212ENST00000578910 ATAD2BQ9ULI0 1458 aa27.89■■■□□ 2.05
CCDC57-212ENST00000578910 SMARCA4P51532 1647 aa27.86■■■□□ 2.05
CCDC57-212ENST00000578910 BAZ1AQ9NRL2 1556 aaPredicted RBP27.77■■■□□ 2.04
CCDC57-212ENST00000578910 SMARCA2P51531 1590 aa27.75■■■□□ 2.03
CCDC57-212ENST00000578910 MROH2BQ7Z745 1585 aa27.67■■■□□ 2.02
CCDC57-212ENST00000578910 HMGXB3Q12766 1538 aa27.65■■■□□ 2.02
CCDC57-212ENST00000578910 BAZ1BQ9UIG0 1483 aaKnown RBP27.59■■■□□ 2.01
CCDC57-212ENST00000578910 PEG3Q9GZU2 1588 aa27.58■■■□□ 2.01
CCDC57-212ENST00000578910 NESP48681 1621 aa27.4■■□□□ 1.98
CCDC57-212ENST00000578910 ERCC6Q03468 1493 aa27.38■■□□□ 1.97
CCDC57-212ENST00000578910 WIZO95785 1651 aa27.33■■□□□ 1.97
CCDC57-212ENST00000578910 RSF1Q96T23 1441 aaPredicted RBP27.24■■□□□ 1.95
CCDC57-212ENST00000578910 CUX2O14529 1486 aa27.19■■□□□ 1.94
CCDC57-212ENST00000578910 LAMC3Q9Y6N6 1575 aa27.18■■□□□ 1.94
CCDC57-212ENST00000578910 CADPSQ9ULU8 1353 aa27.12■■□□□ 1.93
CCDC57-212ENST00000578910 PDS5BQ9NTI5 1447 aa27.07■■□□□ 1.92
CCDC57-212ENST00000578910 DNAJC5Q9H3Z4 198 aa26.98■■□□□ 1.91
CCDC57-212ENST00000578910 KIF21AQ7Z4S6 1674 aa26.97■■□□□ 1.91
CCDC57-212ENST00000578910 TOP2AP11388 1531 aaKnown RBP26.95■■□□□ 1.91
CCDC57-212ENST00000578910 THOC2Q8NI27 1593 aaKnown RBP26.94■■□□□ 1.9
CCDC57-212ENST00000578910 CFTRP13569 1480 aa26.83■■□□□ 1.89
CCDC57-212ENST00000578910 MRC2Q9UBG0 1479 aa26.78■■□□□ 1.88
CCDC57-212ENST00000578910 FANCD2Q9BXW9 1451 aa26.77■■□□□ 1.88
CCDC57-212ENST00000578910 CCDC88BA6NC98 1476 aa26.75■■□□□ 1.87
CCDC57-212ENST00000578910 CEP164Q9UPV0 1460 aa26.74■■□□□ 1.87
CCDC57-212ENST00000578910 WDR62O43379 1518 aa26.67■■□□□ 1.86
CCDC57-212ENST00000578910 URB2Q14146 1524 aaKnown RBP26.53■■□□□ 1.84
CCDC57-212ENST00000578910 PRDM2Q13029 1718 aa26.45■■□□□ 1.82
CCDC57-212ENST00000578910 SUPT5HO00267 1087 aaKnown RBP26.39■■□□□ 1.82
CCDC57-212ENST00000578910 TOPBP1Q92547 1522 aa26.29■■□□□ 1.8
CCDC57-212ENST00000578910 ABCC8Q09428 1581 aa26.24■■□□□ 1.79
CCDC57-212ENST00000578910 IFT140Q96RY7 1462 aa26.2■■□□□ 1.78
CCDC57-212ENST00000578910 DNMBPQ6XZF7 1577 aa26.18■■□□□ 1.78
CCDC57-212ENST00000578910 ZNF608Q9ULD9 1512 aaPredicted RBP26.17■■□□□ 1.78
CCDC57-212ENST00000578910 OSCARQ8IYS5 282 aa26.16■■□□□ 1.78
CCDC57-212ENST00000578910 POLA1P09884 1462 aaPredicted RBP26.04■■□□□ 1.76
CCDC57-212ENST00000578910 AQRO60306 1485 aaKnown RBP eCLIP26.03■■□□□ 1.762e-6■■□□□ 14.2
CCDC57-212ENST00000578910 TARBP1Q13395 1621 aaKnown RBP26■■□□□ 1.75
CCDC57-212ENST00000578910 RAD54L2Q9Y4B4 1467 aa26■■□□□ 1.75
CCDC57-212ENST00000578910 SOGA1O94964 1423 aa26■■□□□ 1.75
CCDC57-212ENST00000578910 TRIM41Q8WV44 630 aa25.95■■□□□ 1.74
CCDC57-212ENST00000578910 CUX1P39880 1505 aa25.94■■□□□ 1.74
CCDC57-212ENST00000578910 EIF4G3O43432 1585 aaKnown RBP25.94■■□□□ 1.74
CCDC57-212ENST00000578910 TDRD9Q8NDG6 1382 aaKnown RBP25.93■■□□□ 1.74
CCDC57-212ENST00000578910 FGD5Q6ZNL6 1462 aa25.92■■□□□ 1.74
CCDC57-212ENST00000578910 FBLN2P98095 1184 aa25.85■■□□□ 1.73
CCDC57-212ENST00000578910 CHD1O14646 1710 aa25.7■■□□□ 1.7
CCDC57-212ENST00000578910 CHMP7Q8WUX9 453 aaPredicted RBP25.69■■□□□ 1.7
CCDC57-212ENST00000578910 SNAPC4Q5SXM2 1469 aa25.68■■□□□ 1.7
CCDC57-212ENST00000578910 WDR97A6NE52 1622 aa25.68■■□□□ 1.7
CCDC57-212ENST00000578910 GRIN2BQ13224 1484 aa25.67■■□□□ 1.7
CCDC57-212ENST00000578910 WRNQ14191 1432 aaPredicted RBP eCLIP25.65■■□□□ 1.7
CCDC57-212ENST00000578910 ABCA10Q8WWZ4 1543 aa25.64■■□□□ 1.7
CCDC57-212ENST00000578910 RIMBP3CA6NJZ7 1639 aa25.64■■□□□ 1.7
CCDC57-212ENST00000578910 RIMBP3BA6NNM3 1639 aa25.64■■□□□ 1.7
CCDC57-212ENST00000578910 RIMBP3Q9UFD9 1639 aa25.64■■□□□ 1.7
CCDC57-212ENST00000578910 GAPVD1Q14C86 1478 aa25.64■■□□□ 1.69
CCDC57-212ENST00000578910 MAGI1Q96QZ7 1491 aaPredicted RBP25.6■■□□□ 1.69
CCDC57-212ENST00000578910 ARHGEF11O15085 1522 aa25.6■■□□□ 1.69
CCDC57-212ENST00000578910 TOP2BQ02880 1626 aa25.58■■□□□ 1.69
CCDC57-212ENST00000578910 SYNJ1O43426 1573 aa25.57■■□□□ 1.68
CCDC57-212ENST00000578910 CYB5RLQ6IPT4 315 aa25.56■■□□□ 1.68
CCDC57-212ENST00000578910 BIVM-ERCC5R4GMW8 1640 aa25.55■■□□□ 1.68
CCDC57-212ENST00000578910 SYNJ2O15056 1496 aa25.53■■□□□ 1.68
CCDC57-212ENST00000578910 ABCA5Q8WWZ7 1642 aa25.52■■□□□ 1.68
CCDC57-212ENST00000578910 PBRM1Q86U86 1689 aa25.5■■□□□ 1.67
CCDC57-212ENST00000578910 CLASP1Q7Z460 1538 aa25.42■■□□□ 1.66
CCDC57-212ENST00000578910 ARAP1Q96P48 1450 aa25.38■■□□□ 1.65
CCDC57-212ENST00000578910 GRIN2AQ12879 1464 aa25.33■■□□□ 1.65
CCDC57-212ENST00000578910 FHAD1B1AJZ9 1412 aa25.32■■□□□ 1.64
CCDC57-212ENST00000578910 ERICH3Q5RHP9 1530 aa25.3■■□□□ 1.64
CCDC57-212ENST00000578910 ADAMTS12P58397 1594 aa25.28■■□□□ 1.64
CCDC57-212ENST00000578910 NUP160Q12769 1436 aa25.23■■□□□ 1.63
CCDC57-212ENST00000578910 CEP170Q5SW79 1584 aa25.21■■□□□ 1.63
CCDC57-212ENST00000578910 IGF1RP08069 1367 aa25.18■■□□□ 1.62
CCDC57-212ENST00000578910 TRHP20396 242 aaPredicted RBP25.17■■□□□ 1.62
CCDC57-212ENST00000578910 KIF27Q86VH2 1401 aa25.14■■□□□ 1.62
CCDC57-212ENST00000578910 JPH4Q96JJ6 628 aa25.12■■□□□ 1.61
CCDC57-212ENST00000578910 ERCC6L2Q5T890 1561 aa25.12■■□□□ 1.61
CCDC57-212ENST00000578910 SHROOM2Q13796 1616 aa25.03■■□□□ 1.6
CCDC57-212ENST00000578910 PRG4Q92954 1404 aaPredicted RBP25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms