RNA–Protein interactions for RNA: ENST00000578826.1

MSL1-205, Transcript of male specific lethal 1 homolog, humanhuman

TSL 2

Gene MSL1, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL1-205ENST00000578826 NISCHQ9Y2I1 1504 aa38.33■■■■□ 3.73
MSL1-205ENST00000578826 CCDC180Q9P1Z9 1646 aa34.13■■■■□ 3.05
MSL1-205ENST00000578826 ABCC9O60706 1549 aa33.58■■■□□ 2.97
MSL1-205ENST00000578826 RB1CC1Q8TDY2 1594 aa32.23■■■□□ 2.75
MSL1-205ENST00000578826 NACADO15069 1562 aa32.17■■■□□ 2.74
MSL1-205ENST00000578826 DCAF8L2P0C7V8 631 aa32.01■■■□□ 2.71
MSL1-205ENST00000578826 MYO15BQ96JP2 1530 aa31.97■■■□□ 2.71
MSL1-205ENST00000578826 ZCCHC6Q5VYS8 1495 aaKnown RBP31.9■■■□□ 2.7
MSL1-205ENST00000578826 DCAF1Q9Y4B6 1507 aa31.75■■■□□ 2.67
MSL1-205ENST00000578826 UNC13AQ9UPW8 1703 aa31.41■■■□□ 2.62
MSL1-205ENST00000578826 PABPN1Q86U42 306 aaKnown RBP eCLIP31.35■■■□□ 2.61
MSL1-205ENST00000578826 BICRAQ9NZM4 1560 aa31.28■■■□□ 2.6
MSL1-205ENST00000578826 SCRIBQ14160 1630 aa31.09■■■□□ 2.57
MSL1-205ENST00000578826 DNAJC5BQ9UF47 199 aa31.05■■■□□ 2.56
MSL1-205ENST00000578826 SHROOM4Q9ULL8 1493 aa31■■■□□ 2.55
MSL1-205ENST00000578826 EIF4G1Q04637 1599 aaKnown RBP30.46■■■□□ 2.47
MSL1-205ENST00000578826 CC2D2AQ9P2K1 1620 aa30.36■■■□□ 2.45
MSL1-205ENST00000578826 CECR2Q9BXF3 1484 aa30.22■■■□□ 2.43
MSL1-205ENST00000578826 SMARCA4P51532 1647 aa29.75■■■□□ 2.35
MSL1-205ENST00000578826 NCAPD3P42695 1498 aa29.72■■■□□ 2.35
MSL1-205ENST00000578826 BAZ1AQ9NRL2 1556 aaPredicted RBP29.72■■■□□ 2.35
MSL1-205ENST00000578826 ATAD2BQ9ULI0 1458 aa29.68■■■□□ 2.34
MSL1-205ENST00000578826 SMARCA2P51531 1590 aa29.61■■■□□ 2.33
MSL1-205ENST00000578826 HMGXB3Q12766 1538 aa29.53■■■□□ 2.32
MSL1-205ENST00000578826 PEG3Q9GZU2 1588 aa29.52■■■□□ 2.32
MSL1-205ENST00000578826 MROH2BQ7Z745 1585 aa29.52■■■□□ 2.32
MSL1-205ENST00000578826 BAZ1BQ9UIG0 1483 aaKnown RBP29.4■■■□□ 2.3
MSL1-205ENST00000578826 WIZO95785 1651 aa29.14■■■□□ 2.26
MSL1-205ENST00000578826 RSF1Q96T23 1441 aaPredicted RBP29.13■■■□□ 2.25
MSL1-205ENST00000578826 NESP48681 1621 aa29.01■■■□□ 2.23
MSL1-205ENST00000578826 ERCC6Q03468 1493 aa28.95■■■□□ 2.22
MSL1-205ENST00000578826 LAMC3Q9Y6N6 1575 aa28.92■■■□□ 2.22
MSL1-205ENST00000578826 TOP2AP11388 1531 aaKnown RBP28.87■■■□□ 2.21
MSL1-205ENST00000578826 CADPSQ9ULU8 1353 aa28.83■■■□□ 2.21
MSL1-205ENST00000578826 CUX2O14529 1486 aa28.78■■■□□ 2.2
MSL1-205ENST00000578826 PDS5BQ9NTI5 1447 aa28.75■■■□□ 2.19
MSL1-205ENST00000578826 CFTRP13569 1480 aa28.62■■■□□ 2.17
MSL1-205ENST00000578826 THOC2Q8NI27 1593 aaKnown RBP28.62■■■□□ 2.17
MSL1-205ENST00000578826 KIF21AQ7Z4S6 1674 aa28.6■■■□□ 2.17
MSL1-205ENST00000578826 CCDC88BA6NC98 1476 aa28.53■■■□□ 2.16
MSL1-205ENST00000578826 FANCD2Q9BXW9 1451 aa28.47■■■□□ 2.15
MSL1-205ENST00000578826 MRC2Q9UBG0 1479 aa28.46■■■□□ 2.15
MSL1-205ENST00000578826 CEP164Q9UPV0 1460 aa28.45■■■□□ 2.14
MSL1-205ENST00000578826 WDR62O43379 1518 aa28.38■■■□□ 2.13
MSL1-205ENST00000578826 PRDM2Q13029 1718 aa28.26■■■□□ 2.12
MSL1-205ENST00000578826 URB2Q14146 1524 aaKnown RBP28.2■■■□□ 2.1
MSL1-205ENST00000578826 SUPT5HO00267 1087 aaKnown RBP28.15■■■□□ 2.1
MSL1-205ENST00000578826 DNAJC5Q9H3Z4 198 aa28.14■■■□□ 2.1
MSL1-205ENST00000578826 ABCC8Q09428 1581 aa27.99■■■□□ 2.07
MSL1-205ENST00000578826 TOPBP1Q92547 1522 aa27.99■■■□□ 2.07
MSL1-205ENST00000578826 DNMBPQ6XZF7 1577 aa27.94■■■□□ 2.06
MSL1-205ENST00000578826 IFT140Q96RY7 1462 aa27.88■■■□□ 2.05
MSL1-205ENST00000578826 ZNF608Q9ULD9 1512 aaPredicted RBP27.76■■■□□ 2.03
MSL1-205ENST00000578826 POLA1P09884 1462 aaPredicted RBP27.75■■■□□ 2.03
MSL1-205ENST00000578826 CUX1P39880 1505 aa27.71■■■□□ 2.03
MSL1-205ENST00000578826 TARBP1Q13395 1621 aaKnown RBP27.7■■■□□ 2.02
MSL1-205ENST00000578826 FGD5Q6ZNL6 1462 aa27.64■■■□□ 2.01
MSL1-205ENST00000578826 SOGA1O94964 1423 aa27.62■■■□□ 2.01
MSL1-205ENST00000578826 EIF4G3O43432 1585 aaKnown RBP27.61■■■□□ 2.01
MSL1-205ENST00000578826 RAD54L2Q9Y4B4 1467 aa27.61■■■□□ 2.01
MSL1-205ENST00000578826 AQRO60306 1485 aaKnown RBP eCLIP27.57■■■□□ 24e-6■■□□□ 12.1
MSL1-205ENST00000578826 OSCARQ8IYS5 282 aa27.53■■■□□ 2
MSL1-205ENST00000578826 WDR97A6NE52 1622 aa27.49■■□□□ 1.99
MSL1-205ENST00000578826 TDRD9Q8NDG6 1382 aaKnown RBP27.48■■□□□ 1.99
MSL1-205ENST00000578826 WRNQ14191 1432 aaPredicted RBP eCLIP27.45■■□□□ 1.98
MSL1-205ENST00000578826 TOP2BQ02880 1626 aa27.41■■□□□ 1.98
MSL1-205ENST00000578826 ABCA10Q8WWZ4 1543 aa27.39■■□□□ 1.98
MSL1-205ENST00000578826 BIVM-ERCC5R4GMW8 1640 aa27.38■■□□□ 1.97
MSL1-205ENST00000578826 SYNJ1O43426 1573 aa27.38■■□□□ 1.97
MSL1-205ENST00000578826 GRIN2BQ13224 1484 aa27.33■■□□□ 1.97
MSL1-205ENST00000578826 SNAPC4Q5SXM2 1469 aa27.31■■□□□ 1.96
MSL1-205ENST00000578826 GAPVD1Q14C86 1478 aa27.3■■□□□ 1.96
MSL1-205ENST00000578826 MAGI1Q96QZ7 1491 aaPredicted RBP27.29■■□□□ 1.96
MSL1-205ENST00000578826 ABCA5Q8WWZ7 1642 aa27.27■■□□□ 1.96
MSL1-205ENST00000578826 CHD1O14646 1710 aa27.24■■□□□ 1.95
MSL1-205ENST00000578826 FBLN2P98095 1184 aa27.23■■□□□ 1.95
MSL1-205ENST00000578826 SYNJ2O15056 1496 aa27.19■■□□□ 1.94
MSL1-205ENST00000578826 PBRM1Q86U86 1689 aa27.18■■□□□ 1.94
MSL1-205ENST00000578826 CHMP7Q8WUX9 453 aaPredicted RBP27.16■■□□□ 1.94
MSL1-205ENST00000578826 ARHGEF11O15085 1522 aa27.08■■□□□ 1.93
MSL1-205ENST00000578826 RIMBP3CA6NJZ7 1639 aa27.07■■□□□ 1.92
MSL1-205ENST00000578826 RIMBP3BA6NNM3 1639 aa27.07■■□□□ 1.92
MSL1-205ENST00000578826 RIMBP3Q9UFD9 1639 aa27.07■■□□□ 1.92
MSL1-205ENST00000578826 ERICH3Q5RHP9 1530 aa27.05■■□□□ 1.92
MSL1-205ENST00000578826 CLASP1Q7Z460 1538 aa27.05■■□□□ 1.92
MSL1-205ENST00000578826 TRIM41Q8WV44 630 aa27.04■■□□□ 1.92
MSL1-205ENST00000578826 ADAMTS12P58397 1594 aa27.02■■□□□ 1.92
MSL1-205ENST00000578826 FHAD1B1AJZ9 1412 aa26.99■■□□□ 1.91
MSL1-205ENST00000578826 GRIN2AQ12879 1464 aa26.98■■□□□ 1.91
MSL1-205ENST00000578826 NUP160Q12769 1436 aa26.9■■□□□ 1.9
MSL1-205ENST00000578826 KIF27Q86VH2 1401 aa26.9■■□□□ 1.9
MSL1-205ENST00000578826 ARAP1Q96P48 1450 aa26.86■■□□□ 1.89
MSL1-205ENST00000578826 IGF1RP08069 1367 aa26.84■■□□□ 1.89
MSL1-205ENST00000578826 CEP170Q5SW79 1584 aa26.84■■□□□ 1.89
MSL1-205ENST00000578826 CYB5RLQ6IPT4 315 aa26.81■■□□□ 1.88
MSL1-205ENST00000578826 CUL7Q14999 1698 aa26.73■■□□□ 1.87
MSL1-205ENST00000578826 SHROOM2Q13796 1616 aa26.68■■□□□ 1.86
MSL1-205ENST00000578826 CARMIL1Q5VZK9 1371 aa26.66■■□□□ 1.86
MSL1-205ENST00000578826 RUSC2Q8N2Y8 1516 aa26.63■■□□□ 1.85
MSL1-205ENST00000578826 ERCC6L2Q5T890 1561 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms