RNA–Protein interactions for RNA: ENST00000578676.5

RFNG-204, Transcript of RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase, humanhuman

TSL 3

Gene RFNG, Length 1,078 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFNG-204ENST00000578676 NISCHQ9Y2I1 1504 aa51.38■■■■■ 5.82
RFNG-204ENST00000578676 CCDC180Q9P1Z9 1646 aa45.71■■■■■ 4.91
RFNG-204ENST00000578676 ABCC9O60706 1549 aa44.86■■■■■ 4.77
RFNG-204ENST00000578676 RB1CC1Q8TDY2 1594 aa43.1■■■■■ 4.49
RFNG-204ENST00000578676 NACADO15069 1562 aa43.03■■■■■ 4.48
RFNG-204ENST00000578676 DCAF8L2P0C7V8 631 aa42.94■■■■■ 4.46
RFNG-204ENST00000578676 ZCCHC6Q5VYS8 1495 aaKnown RBP42.8■■■■■ 4.44
RFNG-204ENST00000578676 MYO15BQ96JP2 1530 aa42.76■■■■■ 4.44
RFNG-204ENST00000578676 DCAF1Q9Y4B6 1507 aa42.52■■■■■ 4.4
RFNG-204ENST00000578676 UNC13AQ9UPW8 1703 aa41.99■■■■■ 4.31
RFNG-204ENST00000578676 PABPN1Q86U42 306 aaKnown RBP eCLIP41.88■■■■■ 4.292e-8■□□□□ 10.2
RFNG-204ENST00000578676 BICRAQ9NZM4 1560 aa41.78■■■■■ 4.28
RFNG-204ENST00000578676 SCRIBQ14160 1630 aa41.7■■■■■ 4.27
RFNG-204ENST00000578676 SHROOM4Q9ULL8 1493 aa41.41■■■■■ 4.22
RFNG-204ENST00000578676 DNAJC5BQ9UF47 199 aa41.24■■■■■ 4.19
RFNG-204ENST00000578676 EIF4G1Q04637 1599 aaKnown RBP40.71■■■■■ 4.11
RFNG-204ENST00000578676 CC2D2AQ9P2K1 1620 aa40.55■■■■■ 4.08
RFNG-204ENST00000578676 CECR2Q9BXF3 1484 aa40.33■■■■■ 4.05
RFNG-204ENST00000578676 SMARCA4P51532 1647 aa39.88■■■■□ 3.97
RFNG-204ENST00000578676 BAZ1AQ9NRL2 1556 aaPredicted RBP39.84■■■■□ 3.97
RFNG-204ENST00000578676 NCAPD3P42695 1498 aa39.72■■■■□ 3.95
RFNG-204ENST00000578676 ATAD2BQ9ULI0 1458 aa39.72■■■■□ 3.95
RFNG-204ENST00000578676 SMARCA2P51531 1590 aa39.67■■■■□ 3.94
RFNG-204ENST00000578676 MROH2BQ7Z745 1585 aa39.59■■■■□ 3.93
RFNG-204ENST00000578676 HMGXB3Q12766 1538 aa39.52■■■■□ 3.92
RFNG-204ENST00000578676 PEG3Q9GZU2 1588 aa39.51■■■■□ 3.92
RFNG-204ENST00000578676 BAZ1BQ9UIG0 1483 aaKnown RBP39.4■■■■□ 3.9
RFNG-204ENST00000578676 RSF1Q96T23 1441 aaPredicted RBP39.11■■■■□ 3.85
RFNG-204ENST00000578676 WIZO95785 1651 aa39.1■■■■□ 3.85
RFNG-204ENST00000578676 NESP48681 1621 aa38.77■■■■□ 3.8
RFNG-204ENST00000578676 TOP2AP11388 1531 aaKnown RBP38.75■■■■□ 3.79
RFNG-204ENST00000578676 ERCC6Q03468 1493 aa38.7■■■■□ 3.79
RFNG-204ENST00000578676 LAMC3Q9Y6N6 1575 aa38.67■■■■□ 3.78
RFNG-204ENST00000578676 CADPSQ9ULU8 1353 aa38.56■■■■□ 3.76
RFNG-204ENST00000578676 PDS5BQ9NTI5 1447 aa38.44■■■■□ 3.74
RFNG-204ENST00000578676 CUX2O14529 1486 aa38.34■■■■□ 3.73
RFNG-204ENST00000578676 CFTRP13569 1480 aa38.3■■■■□ 3.72
RFNG-204ENST00000578676 CCDC88BA6NC98 1476 aa38.28■■■■□ 3.72
RFNG-204ENST00000578676 KIF21AQ7Z4S6 1674 aa38.26■■■■□ 3.71
RFNG-204ENST00000578676 THOC2Q8NI27 1593 aaKnown RBP38.22■■■■□ 3.71
RFNG-204ENST00000578676 FANCD2Q9BXW9 1451 aa38.11■■■■□ 3.69
RFNG-204ENST00000578676 CEP164Q9UPV0 1460 aa38.09■■■■□ 3.69
RFNG-204ENST00000578676 MRC2Q9UBG0 1479 aa38.06■■■■□ 3.68
RFNG-204ENST00000578676 SUPT5HO00267 1087 aaKnown RBP38■■■■□ 3.67
RFNG-204ENST00000578676 WDR62O43379 1518 aa37.93■■■■□ 3.66
RFNG-204ENST00000578676 PRDM2Q13029 1718 aa37.89■■■■□ 3.66
RFNG-204ENST00000578676 URB2Q14146 1524 aaKnown RBP37.73■■■■□ 3.63
RFNG-204ENST00000578676 TOPBP1Q92547 1522 aa37.48■■■■□ 3.59
RFNG-204ENST00000578676 ABCC8Q09428 1581 aa37.47■■■■□ 3.59
RFNG-204ENST00000578676 DNMBPQ6XZF7 1577 aa37.43■■■■□ 3.58
RFNG-204ENST00000578676 IFT140Q96RY7 1462 aa37.3■■■■□ 3.56
RFNG-204ENST00000578676 DNAJC5Q9H3Z4 198 aa37.26■■■■□ 3.56
RFNG-204ENST00000578676 POLA1P09884 1462 aaPredicted RBP37.16■■■■□ 3.54
RFNG-204ENST00000578676 CUX1P39880 1505 aa37.15■■■■□ 3.54
RFNG-204ENST00000578676 ZNF608Q9ULD9 1512 aaPredicted RBP37.11■■■■□ 3.53
RFNG-204ENST00000578676 TARBP1Q13395 1621 aaKnown RBP37.06■■■■□ 3.52
RFNG-204ENST00000578676 FGD5Q6ZNL6 1462 aa37.06■■■■□ 3.52
RFNG-204ENST00000578676 SOGA1O94964 1423 aa37■■■■□ 3.51
RFNG-204ENST00000578676 RAD54L2Q9Y4B4 1467 aa36.99■■■■□ 3.51
RFNG-204ENST00000578676 EIF4G3O43432 1585 aaKnown RBP36.96■■■■□ 3.51
RFNG-204ENST00000578676 WRNQ14191 1432 aaPredicted RBP eCLIP36.9■■■■□ 3.5
RFNG-204ENST00000578676 AQRO60306 1485 aaKnown RBP eCLIP36.88■■■■□ 3.58e-10■■■■□ 22.4
RFNG-204ENST00000578676 TDRD9Q8NDG6 1382 aaKnown RBP36.8■■■■□ 3.48
RFNG-204ENST00000578676 WDR97A6NE52 1622 aa36.79■■■■□ 3.48
RFNG-204ENST00000578676 TOP2BQ02880 1626 aa36.79■■■■□ 3.48
RFNG-204ENST00000578676 SYNJ1O43426 1573 aa36.78■■■■□ 3.48
RFNG-204ENST00000578676 BIVM-ERCC5R4GMW8 1640 aa36.77■■■■□ 3.48
RFNG-204ENST00000578676 ABCA10Q8WWZ4 1543 aa36.7■■■■□ 3.47
RFNG-204ENST00000578676 OSCARQ8IYS5 282 aa36.7■■■■□ 3.47
RFNG-204ENST00000578676 GRIN2BQ13224 1484 aa36.6■■■■□ 3.45
RFNG-204ENST00000578676 GAPVD1Q14C86 1478 aa36.57■■■■□ 3.45
RFNG-204ENST00000578676 SNAPC4Q5SXM2 1469 aa36.56■■■■□ 3.44
RFNG-204ENST00000578676 ABCA5Q8WWZ7 1642 aa36.54■■■■□ 3.44
RFNG-204ENST00000578676 MAGI1Q96QZ7 1491 aaPredicted RBP36.52■■■■□ 3.44
RFNG-204ENST00000578676 FBLN2P98095 1184 aa36.46■■■■□ 3.43
RFNG-204ENST00000578676 CHD1O14646 1710 aa36.45■■■■□ 3.43
RFNG-204ENST00000578676 PBRM1Q86U86 1689 aa36.44■■■■□ 3.42
RFNG-204ENST00000578676 SYNJ2O15056 1496 aa36.38■■■■□ 3.41
RFNG-204ENST00000578676 CHMP7Q8WUX9 453 aaPredicted RBP36.36■■■■□ 3.41
RFNG-204ENST00000578676 ERICH3Q5RHP9 1530 aa36.25■■■■□ 3.39
RFNG-204ENST00000578676 ADAMTS12P58397 1594 aa36.22■■■■□ 3.39
RFNG-204ENST00000578676 FHAD1B1AJZ9 1412 aa36.17■■■■□ 3.38
RFNG-204ENST00000578676 CLASP1Q7Z460 1538 aa36.13■■■■□ 3.38
RFNG-204ENST00000578676 KIF27Q86VH2 1401 aa36.13■■■■□ 3.37
RFNG-204ENST00000578676 GRIN2AQ12879 1464 aa36.12■■■■□ 3.37
RFNG-204ENST00000578676 ARHGEF11O15085 1522 aa36.12■■■■□ 3.37
RFNG-204ENST00000578676 RIMBP3CA6NJZ7 1639 aa36.1■■■■□ 3.37
RFNG-204ENST00000578676 RIMBP3BA6NNM3 1639 aa36.1■■■■□ 3.37
RFNG-204ENST00000578676 RIMBP3Q9UFD9 1639 aa36.1■■■■□ 3.37
RFNG-204ENST00000578676 TRIM41Q8WV44 630 aa35.99■■■■□ 3.35
RFNG-204ENST00000578676 IGF1RP08069 1367 aa35.98■■■■□ 3.35
RFNG-204ENST00000578676 NUP160Q12769 1436 aa35.98■■■■□ 3.35
RFNG-204ENST00000578676 CEP170Q5SW79 1584 aa35.93■■■■□ 3.34
RFNG-204ENST00000578676 CUL7Q14999 1698 aa35.88■■■■□ 3.33
RFNG-204ENST00000578676 ARAP1Q96P48 1450 aa35.83■■■■□ 3.33
RFNG-204ENST00000578676 CARMIL1Q5VZK9 1371 aa35.76■■■■□ 3.32
RFNG-204ENST00000578676 CYB5RLQ6IPT4 315 aa35.76■■■■□ 3.32
RFNG-204ENST00000578676 RUSC2Q8N2Y8 1516 aa35.72■■■■□ 3.31
RFNG-204ENST00000578676 SHROOM2Q13796 1616 aa35.68■■■■□ 3.3
RFNG-204ENST00000578676 KIAA0586Q9BVV6 1533 aa35.6■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms