RNA–Protein interactions for RNA: ENST00000578660.1

AC004477.1-201, humanhuman

Gene AC004477.1, Length 2,910 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004477.1-201ENST00000578660 NISCHQ9Y2I1 1504 aa23.06■■□□□ 1.28
AC004477.1-201ENST00000578660 CCDC180Q9P1Z9 1646 aa20.14■□□□□ 0.82
AC004477.1-201ENST00000578660 ZCCHC6Q5VYS8 1495 aaKnown RBP19.44■□□□□ 0.7
AC004477.1-201ENST00000578660 DCAF1Q9Y4B6 1507 aa19.15■□□□□ 0.66
AC004477.1-201ENST00000578660 MYO15BQ96JP2 1530 aa18.87■□□□□ 0.61
AC004477.1-201ENST00000578660 DCAF8L2P0C7V8 631 aa18.81■□□□□ 0.6
AC004477.1-201ENST00000578660 SHROOM4Q9ULL8 1493 aa18.78■□□□□ 0.6
AC004477.1-201ENST00000578660 ABCC9O60706 1549 aa18.72■□□□□ 0.59
AC004477.1-201ENST00000578660 NACADO15069 1562 aa18.68■□□□□ 0.58
AC004477.1-201ENST00000578660 RB1CC1Q8TDY2 1594 aa18.47■□□□□ 0.55
AC004477.1-201ENST00000578660 SCRIBQ14160 1630 aa18.43■□□□□ 0.54
AC004477.1-201ENST00000578660 SUPT5HO00267 1087 aaKnown RBP18.15■□□□□ 0.5
AC004477.1-201ENST00000578660 UNC13AQ9UPW8 1703 aa18.09■□□□□ 0.49
AC004477.1-201ENST00000578660 RSF1Q96T23 1441 aaPredicted RBP17.91■□□□□ 0.46
AC004477.1-201ENST00000578660 BICRAQ9NZM4 1560 aa17.86■□□□□ 0.45
AC004477.1-201ENST00000578660 BAZ1AQ9NRL2 1556 aaPredicted RBP17.83■□□□□ 0.44
AC004477.1-201ENST00000578660 CECR2Q9BXF3 1484 aa17.83■□□□□ 0.44
AC004477.1-201ENST00000578660 MROH2BQ7Z745 1585 aa17.78■□□□□ 0.44
AC004477.1-201ENST00000578660 SMARCA4P51532 1647 aa17.72■□□□□ 0.43
AC004477.1-201ENST00000578660 WIZO95785 1651 aa17.67■□□□□ 0.42
AC004477.1-201ENST00000578660 PABPN1Q86U42 306 aaKnown RBP eCLIP17.61■□□□□ 0.41
AC004477.1-201ENST00000578660 TOP2AP11388 1531 aaKnown RBP17.55■□□□□ 0.4
AC004477.1-201ENST00000578660 PEG3Q9GZU2 1588 aa17.53■□□□□ 0.4
AC004477.1-201ENST00000578660 CHIC1Q5VXU3 224 aa17.5■□□□□ 0.39
AC004477.1-201ENST00000578660 SMARCA2P51531 1590 aa17.41■□□□□ 0.38
AC004477.1-201ENST00000578660 ATAD2BQ9ULI0 1458 aa17.34■□□□□ 0.37
AC004477.1-201ENST00000578660 EIF4G1Q04637 1599 aaKnown RBP17.32■□□□□ 0.36
AC004477.1-201ENST00000578660 CCDC88BA6NC98 1476 aa17.29■□□□□ 0.36
AC004477.1-201ENST00000578660 BAZ1BQ9UIG0 1483 aaKnown RBP17.28■□□□□ 0.36
AC004477.1-201ENST00000578660 HMGXB3Q12766 1538 aa17.23■□□□□ 0.35
AC004477.1-201ENST00000578660 NCAPD3P42695 1498 aa17.18■□□□□ 0.34
AC004477.1-201ENST00000578660 TRIM41Q8WV44 630 aa17.11■□□□□ 0.33
AC004477.1-201ENST00000578660 PCGF6Q9BYE7 350 aa17.03■□□□□ 0.32
AC004477.1-201ENST00000578660 CC2D2AQ9P2K1 1620 aa17.01■□□□□ 0.31
AC004477.1-201ENST00000578660 ABCC8Q09428 1581 aa16.97■□□□□ 0.31
AC004477.1-201ENST00000578660 PRDM2Q13029 1718 aa16.9■□□□□ 0.3
AC004477.1-201ENST00000578660 LOC105371045A0A1W2PR82 267 aa16.89■□□□□ 0.29
AC004477.1-201ENST00000578660 WRNQ14191 1432 aaPredicted RBP eCLIP16.88■□□□□ 0.29
AC004477.1-201ENST00000578660 EHMT2Q96KQ7 1210 aa16.86■□□□□ 0.29
AC004477.1-201ENST00000578660 PPARGC1BQ86YN6 1023 aaKnown RBP16.86■□□□□ 0.29
AC004477.1-201ENST00000578660 CFTRP13569 1480 aa16.85■□□□□ 0.29
AC004477.1-201ENST00000578660 SYNJ1O43426 1573 aa16.81■□□□□ 0.28
AC004477.1-201ENST00000578660 EEA1Q15075 1411 aa16.8■□□□□ 0.28
AC004477.1-201ENST00000578660 BIVM-ERCC5R4GMW8 1640 aa16.78■□□□□ 0.28
AC004477.1-201ENST00000578660 TOP2BQ02880 1626 aa16.77■□□□□ 0.28
AC004477.1-201ENST00000578660 HRCP23327 699 aa16.74■□□□□ 0.27
AC004477.1-201ENST00000578660 CADPSQ9ULU8 1353 aa16.73■□□□□ 0.27
AC004477.1-201ENST00000578660 FAM9AQ8IZU1 332 aaPredicted RBP16.72■□□□□ 0.27
AC004477.1-201ENST00000578660 SOGA1O94964 1423 aa16.66■□□□□ 0.26
AC004477.1-201ENST00000578660 CUX1P39880 1505 aa16.64■□□□□ 0.25
AC004477.1-201ENST00000578660 LAMC3Q9Y6N6 1575 aa16.62■□□□□ 0.25
AC004477.1-201ENST00000578660 KIF21BO75037 1637 aa16.57■□□□□ 0.24
AC004477.1-201ENST00000578660 RUSC2Q8N2Y8 1516 aa16.57■□□□□ 0.24
AC004477.1-201ENST00000578660 CSRNP3Q8WYN3 585 aa16.56■□□□□ 0.24
AC004477.1-201ENST00000578660 FANCD2Q9BXW9 1451 aa16.56■□□□□ 0.24
AC004477.1-201ENST00000578660 GOLGA3Q08378 1498 aa16.54■□□□□ 0.24
AC004477.1-201ENST00000578660 SLC24A1O60721 1099 aa16.54■□□□□ 0.24
AC004477.1-201ENST00000578660 CEP164Q9UPV0 1460 aa16.53■□□□□ 0.24
AC004477.1-201ENST00000578660 DNMBPQ6XZF7 1577 aa16.5■□□□□ 0.23
AC004477.1-201ENST00000578660 TNIKQ9UKE5 1360 aa16.49■□□□□ 0.23
AC004477.1-201ENST00000578660 MYT1Q01538 1121 aa16.49■□□□□ 0.23
AC004477.1-201ENST00000578660 NESP48681 1621 aa16.47■□□□□ 0.23
AC004477.1-201ENST00000578660 PELP1Q8IZL8 1130 aaKnown RBP16.47■□□□□ 0.23
AC004477.1-201ENST00000578660 KIF27Q86VH2 1401 aa16.45■□□□□ 0.22
AC004477.1-201ENST00000578660 PDS5BQ9NTI5 1447 aa16.45■□□□□ 0.22
AC004477.1-201ENST00000578660 ERICH3Q5RHP9 1530 aa16.43■□□□□ 0.22
AC004477.1-201ENST00000578660 FGD5Q6ZNL6 1462 aa16.43■□□□□ 0.22
AC004477.1-201ENST00000578660 TOPBP1Q92547 1522 aa16.41■□□□□ 0.22
AC004477.1-201ENST00000578660 CEP162Q5TB80 1403 aa16.4■□□□□ 0.22
AC004477.1-201ENST00000578660 PRXQ9BXM0 1461 aa16.38■□□□□ 0.21
AC004477.1-201ENST00000578660 KIF21AQ7Z4S6 1674 aa16.37■□□□□ 0.21
AC004477.1-201ENST00000578660 UBTFP17480 764 aaKnown RBP16.35■□□□□ 0.21
AC004477.1-201ENST00000578660 CUX2O14529 1486 aa16.35■□□□□ 0.21
AC004477.1-201ENST00000578660 RAPGEF2Q9Y4G8 1499 aa16.34■□□□□ 0.21
AC004477.1-201ENST00000578660 URB2Q14146 1524 aaKnown RBP16.33■□□□□ 0.2
AC004477.1-201ENST00000578660 ABCA10Q8WWZ4 1543 aa16.33■□□□□ 0.2
AC004477.1-201ENST00000578660 POLA1P09884 1462 aaPredicted RBP16.33■□□□□ 0.2
AC004477.1-201ENST00000578660 DNAJC5BQ9UF47 199 aa16.32■□□□□ 0.2
AC004477.1-201ENST00000578660 WDR97A6NE52 1622 aa16.3■□□□□ 0.2
AC004477.1-201ENST00000578660 TTBK1Q5TCY1 1321 aaPredicted RBP16.27■□□□□ 0.19
AC004477.1-201ENST00000578660 TRIM26Q12899 539 aaPredicted RBP16.25■□□□□ 0.19
AC004477.1-201ENST00000578660 MRC2Q9UBG0 1479 aa16.24■□□□□ 0.19
AC004477.1-201ENST00000578660 CLIP1P30622 1438 aa16.24■□□□□ 0.19
AC004477.1-201ENST00000578660 IGF1RP08069 1367 aa16.23■□□□□ 0.19
AC004477.1-201ENST00000578660 CUL7Q14999 1698 aa16.23■□□□□ 0.19
AC004477.1-201ENST00000578660 RAD54L2Q9Y4B4 1467 aa16.22■□□□□ 0.19
AC004477.1-201ENST00000578660 ABCA5Q8WWZ7 1642 aa16.2■□□□□ 0.18
AC004477.1-201ENST00000578660 CARMIL1Q5VZK9 1371 aa16.17■□□□□ 0.18
AC004477.1-201ENST00000578660 TARBP1Q13395 1621 aaKnown RBP16.17■□□□□ 0.18
AC004477.1-201ENST00000578660 WDR62O43379 1518 aa16.16■□□□□ 0.18
AC004477.1-201ENST00000578660 VPS8Q8N3P4 1428 aa16.14■□□□□ 0.17
AC004477.1-201ENST00000578660 GAPVD1Q14C86 1478 aa16.1■□□□□ 0.17
AC004477.1-201ENST00000578660 ERCC6Q03468 1493 aa16.08■□□□□ 0.16
AC004477.1-201ENST00000578660 IFT140Q96RY7 1462 aa16.07■□□□□ 0.16
AC004477.1-201ENST00000578660 THOC2Q8NI27 1593 aaKnown RBP16.07■□□□□ 0.16
AC004477.1-201ENST00000578660 PBRM1Q86U86 1689 aa16.07■□□□□ 0.16
AC004477.1-201ENST00000578660 ARAP1Q96P48 1450 aa16.07■□□□□ 0.16
AC004477.1-201ENST00000578660 CTTNBP2Q8WZ74 1663 aa16.07■□□□□ 0.16
AC004477.1-201ENST00000578660 TDRD9Q8NDG6 1382 aaKnown RBP16.03■□□□□ 0.16
AC004477.1-201ENST00000578660 ARHGAP35Q9NRY4 1499 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms