RNA–Protein interactions for RNA: ENST00000578497.5

LINC00668-202, long intergenic non-protein coding RNA 668, humanhuman

TSL 4

Gene LINC00668, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00668-202ENST00000578497 NISCHQ9Y2I1 1504 aa26.94■■□□□ 1.9
LINC00668-202ENST00000578497 ABCC9O60706 1549 aa25.19■■□□□ 1.62
LINC00668-202ENST00000578497 CCDC180Q9P1Z9 1646 aa24.36■■□□□ 1.49
LINC00668-202ENST00000578497 DNAJC5BQ9UF47 199 aa24.32■■□□□ 1.48
LINC00668-202ENST00000578497 RB1CC1Q8TDY2 1594 aa23.54■■□□□ 1.36
LINC00668-202ENST00000578497 PABPN1Q86U42 306 aaKnown RBP eCLIP23.41■■□□□ 1.34
LINC00668-202ENST00000578497 NACADO15069 1562 aa23.21■■□□□ 1.31
LINC00668-202ENST00000578497 DCAF8L2P0C7V8 631 aa23.15■■□□□ 1.3
LINC00668-202ENST00000578497 UNC13AQ9UPW8 1703 aa23.11■■□□□ 1.29
LINC00668-202ENST00000578497 BICRAQ9NZM4 1560 aa23■■□□□ 1.27
LINC00668-202ENST00000578497 CECR2Q9BXF3 1484 aa22.7■■□□□ 1.22
LINC00668-202ENST00000578497 DNAJC5Q9H3Z4 198 aa22.67■■□□□ 1.22
LINC00668-202ENST00000578497 CC2D2AQ9P2K1 1620 aa22.67■■□□□ 1.22
LINC00668-202ENST00000578497 MYO15BQ96JP2 1530 aa22.61■■□□□ 1.21
LINC00668-202ENST00000578497 EIF4G1Q04637 1599 aaKnown RBP22.44■■□□□ 1.18
LINC00668-202ENST00000578497 SHROOM4Q9ULL8 1493 aa22.39■■□□□ 1.17
LINC00668-202ENST00000578497 SCRIBQ14160 1630 aa22.31■■□□□ 1.16
LINC00668-202ENST00000578497 ZCCHC6Q5VYS8 1495 aaKnown RBP22.17■■□□□ 1.14
LINC00668-202ENST00000578497 DCAF1Q9Y4B6 1507 aa22.11■■□□□ 1.13
LINC00668-202ENST00000578497 CUX2O14529 1486 aa21.83■■□□□ 1.09
LINC00668-202ENST00000578497 ERCC6Q03468 1493 aa21.71■■□□□ 1.07
LINC00668-202ENST00000578497 NESP48681 1621 aa21.48■■□□□ 1.03
LINC00668-202ENST00000578497 NCAPD3P42695 1498 aa21.48■■□□□ 1.03
LINC00668-202ENST00000578497 TRIM41Q8WV44 630 aa21.48■■□□□ 1.03
LINC00668-202ENST00000578497 ATAD2BQ9ULI0 1458 aa21.35■■□□□ 1.01
LINC00668-202ENST00000578497 THOC2Q8NI27 1593 aaKnown RBP21.31■■□□□ 1
LINC00668-202ENST00000578497 HMGXB3Q12766 1538 aa21.21■□□□□ 0.99
LINC00668-202ENST00000578497 SMARCA2P51531 1590 aa21.19■□□□□ 0.98
LINC00668-202ENST00000578497 SMARCA4P51532 1647 aa21.16■□□□□ 0.98
LINC00668-202ENST00000578497 KIF21AQ7Z4S6 1674 aa21.12■□□□□ 0.97
LINC00668-202ENST00000578497 BAZ1BQ9UIG0 1483 aaKnown RBP21.09■□□□□ 0.97
LINC00668-202ENST00000578497 LAMC3Q9Y6N6 1575 aa21.06■□□□□ 0.96
LINC00668-202ENST00000578497 PDS5BQ9NTI5 1447 aa20.96■□□□□ 0.95
LINC00668-202ENST00000578497 PEG3Q9GZU2 1588 aa20.9■□□□□ 0.94
LINC00668-202ENST00000578497 BAZ1AQ9NRL2 1556 aaPredicted RBP20.9■□□□□ 0.94
LINC00668-202ENST00000578497 MRC2Q9UBG0 1479 aa20.86■□□□□ 0.93
LINC00668-202ENST00000578497 WDR62O43379 1518 aa20.83■□□□□ 0.93
LINC00668-202ENST00000578497 MROH2BQ7Z745 1585 aa20.82■□□□□ 0.92
LINC00668-202ENST00000578497 CADPSQ9ULU8 1353 aa20.81■□□□□ 0.92
LINC00668-202ENST00000578497 OSCARQ8IYS5 282 aa20.79■□□□□ 0.92
LINC00668-202ENST00000578497 CEP164Q9UPV0 1460 aa20.63■□□□□ 0.89
LINC00668-202ENST00000578497 RIMBP3CA6NJZ7 1639 aa20.63■□□□□ 0.89
LINC00668-202ENST00000578497 RIMBP3BA6NNM3 1639 aa20.63■□□□□ 0.89
LINC00668-202ENST00000578497 RIMBP3Q9UFD9 1639 aa20.63■□□□□ 0.89
LINC00668-202ENST00000578497 FANCD2Q9BXW9 1451 aa20.59■□□□□ 0.89
LINC00668-202ENST00000578497 WIZO95785 1651 aa20.54■□□□□ 0.88
LINC00668-202ENST00000578497 URB2Q14146 1524 aaKnown RBP20.51■□□□□ 0.87
LINC00668-202ENST00000578497 ARHGEF11O15085 1522 aa20.48■□□□□ 0.87
LINC00668-202ENST00000578497 CYB5RLQ6IPT4 315 aa20.43■□□□□ 0.86
LINC00668-202ENST00000578497 CFTRP13569 1480 aa20.43■□□□□ 0.86
LINC00668-202ENST00000578497 TRHP20396 242 aaPredicted RBP20.4■□□□□ 0.86
LINC00668-202ENST00000578497 ZNF608Q9ULD9 1512 aaPredicted RBP20.39■□□□□ 0.85
LINC00668-202ENST00000578497 ARAP1Q96P48 1450 aa20.25■□□□□ 0.83
LINC00668-202ENST00000578497 IFT140Q96RY7 1462 aa20.24■□□□□ 0.83
LINC00668-202ENST00000578497 AEBP2Q6ZN18 517 aaPredicted RBP20.23■□□□□ 0.83
LINC00668-202ENST00000578497 EIF4G3O43432 1585 aaKnown RBP20.17■□□□□ 0.82
LINC00668-202ENST00000578497 CHD1O14646 1710 aa20.17■□□□□ 0.82
LINC00668-202ENST00000578497 TOP2AP11388 1531 aaKnown RBP20.15■□□□□ 0.82
LINC00668-202ENST00000578497 TOPBP1Q92547 1522 aa20.13■□□□□ 0.81
LINC00668-202ENST00000578497 AQRO60306 1485 aaKnown RBP eCLIP20.12■□□□□ 0.812e-6■■■■■ 47.5
LINC00668-202ENST00000578497 RSF1Q96T23 1441 aaPredicted RBP20.12■□□□□ 0.81
LINC00668-202ENST00000578497 FBLN2P98095 1184 aa20.12■□□□□ 0.81
LINC00668-202ENST00000578497 PRDM2Q13029 1718 aa20.11■□□□□ 0.81
LINC00668-202ENST00000578497 TARBP1Q13395 1621 aaKnown RBP20.02■□□□□ 0.79
LINC00668-202ENST00000578497 CCDC88BA6NC98 1476 aa19.99■□□□□ 0.79
LINC00668-202ENST00000578497 DNMBPQ6XZF7 1577 aa19.96■□□□□ 0.79
LINC00668-202ENST00000578497 ABCC8Q09428 1581 aa19.92■□□□□ 0.78
LINC00668-202ENST00000578497 RAD54L2Q9Y4B4 1467 aa19.91■□□□□ 0.78
LINC00668-202ENST00000578497 CLASP1Q7Z460 1538 aa19.9■□□□□ 0.78
LINC00668-202ENST00000578497 POLA1P09884 1462 aaPredicted RBP19.89■□□□□ 0.77
LINC00668-202ENST00000578497 TDRD9Q8NDG6 1382 aaKnown RBP19.89■□□□□ 0.77
LINC00668-202ENST00000578497 SNAPC4Q5SXM2 1469 aa19.85■□□□□ 0.77
LINC00668-202ENST00000578497 CHMP7Q8WUX9 453 aaPredicted RBP19.8■□□□□ 0.76
LINC00668-202ENST00000578497 SOGA1O94964 1423 aa19.79■□□□□ 0.76
LINC00668-202ENST00000578497 SYNJ1O43426 1573 aa19.77■□□□□ 0.76
LINC00668-202ENST00000578497 GAPVD1Q14C86 1478 aa19.74■□□□□ 0.75
LINC00668-202ENST00000578497 FGD5Q6ZNL6 1462 aa19.68■□□□□ 0.74
LINC00668-202ENST00000578497 MAGI1Q96QZ7 1491 aaPredicted RBP19.68■□□□□ 0.74
LINC00668-202ENST00000578497 SYNJ2O15056 1496 aa19.66■□□□□ 0.74
LINC00668-202ENST00000578497 ERCC6L2Q5T890 1561 aa19.66■□□□□ 0.74
LINC00668-202ENST00000578497 GRIN2BQ13224 1484 aa19.65■□□□□ 0.74
LINC00668-202ENST00000578497 WDR97A6NE52 1622 aa19.61■□□□□ 0.73
LINC00668-202ENST00000578497 CUX1P39880 1505 aa19.58■□□□□ 0.73
LINC00668-202ENST00000578497 PBRM1Q86U86 1689 aa19.56■□□□□ 0.72
LINC00668-202ENST00000578497 ILDR1Q86SU0 546 aaPredicted RBP19.52■□□□□ 0.72
LINC00668-202ENST00000578497 KIF13AQ9H1H9 1805 aa19.51■□□□□ 0.71
LINC00668-202ENST00000578497 CEP170Q5SW79 1584 aa19.46■□□□□ 0.71
LINC00668-202ENST00000578497 KDM4FA0A1W2PPD8 638 aa19.44■□□□□ 0.7
LINC00668-202ENST00000578497 GRIN2AQ12879 1464 aa19.42■□□□□ 0.7
LINC00668-202ENST00000578497 ABCA5Q8WWZ7 1642 aa19.42■□□□□ 0.7
LINC00668-202ENST00000578497 NUP160Q12769 1436 aa19.37■□□□□ 0.69
LINC00668-202ENST00000578497 ABCA10Q8WWZ4 1543 aa19.36■□□□□ 0.69
LINC00668-202ENST00000578497 SHROOM2Q13796 1616 aa19.36■□□□□ 0.69
LINC00668-202ENST00000578497 FAM69CQ0P6D2 419 aa19.35■□□□□ 0.69
LINC00668-202ENST00000578497 ADAMTS12P58397 1594 aa19.32■□□□□ 0.68
LINC00668-202ENST00000578497 ABCC10Q5T3U5 1492 aa19.28■□□□□ 0.68
LINC00668-202ENST00000578497 PRG4Q92954 1404 aaPredicted RBP19.27■□□□□ 0.68
LINC00668-202ENST00000578497 DIP2BQ9P265 1576 aa19.23■□□□□ 0.67
LINC00668-202ENST00000578497 KDM6BO15054 1643 aa19.22■□□□□ 0.67
LINC00668-202ENST00000578497 FHAD1B1AJZ9 1412 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms