RNA–Protein interactions for RNA: ENST00000578441.5

CTC1-204, Transcript of CST telomere replication complex component 1, humanhuman

TSL 5

Gene CTC1, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-204ENST00000578441 NISCHQ9Y2I1 1504 aa25.47■■□□□ 1.67
CTC1-204ENST00000578441 CCDC180Q9P1Z9 1646 aa22.97■■□□□ 1.27
CTC1-204ENST00000578441 ABCC9O60706 1549 aa22.96■■□□□ 1.27
CTC1-204ENST00000578441 DNAJC5BQ9UF47 199 aa21.97■■□□□ 1.11
CTC1-204ENST00000578441 RB1CC1Q8TDY2 1594 aa21.84■■□□□ 1.09
CTC1-204ENST00000578441 NACADO15069 1562 aa21.7■■□□□ 1.06
CTC1-204ENST00000578441 MYO15BQ96JP2 1530 aa21.45■■□□□ 1.02
CTC1-204ENST00000578441 DCAF8L2P0C7V8 631 aa21.35■■□□□ 1.01
CTC1-204ENST00000578441 UNC13AQ9UPW8 1703 aa21.31■■□□□ 1
CTC1-204ENST00000578441 PABPN1Q86U42 306 aaKnown RBP eCLIP21.29■■□□□ 1
CTC1-204ENST00000578441 BICRAQ9NZM4 1560 aa21.15■□□□□ 0.98
CTC1-204ENST00000578441 DCAF1Q9Y4B6 1507 aa21.13■□□□□ 0.97
CTC1-204ENST00000578441 ZCCHC6Q5VYS8 1495 aaKnown RBP21.11■□□□□ 0.97
CTC1-204ENST00000578441 SHROOM4Q9ULL8 1493 aa21.02■□□□□ 0.96
CTC1-204ENST00000578441 CECR2Q9BXF3 1484 aa20.8■□□□□ 0.92
CTC1-204ENST00000578441 SCRIBQ14160 1630 aa20.78■□□□□ 0.92
CTC1-204ENST00000578441 CC2D2AQ9P2K1 1620 aa20.76■□□□□ 0.91
CTC1-204ENST00000578441 EIF4G1Q04637 1599 aaKnown RBP20.65■□□□□ 0.9
CTC1-204ENST00000578441 DNAJC5Q9H3Z4 198 aa20.6■□□□□ 0.89
CTC1-204ENST00000578441 CUX2O14529 1486 aa20.11■□□□□ 0.81
CTC1-204ENST00000578441 NCAPD3P42695 1498 aa20■□□□□ 0.79
CTC1-204ENST00000578441 SMARCA2P51531 1590 aa19.9■□□□□ 0.78
CTC1-204ENST00000578441 ERCC6Q03468 1493 aa19.89■□□□□ 0.77
CTC1-204ENST00000578441 ATAD2BQ9ULI0 1458 aa19.89■□□□□ 0.77
CTC1-204ENST00000578441 SMARCA4P51532 1647 aa19.88■□□□□ 0.77
CTC1-204ENST00000578441 HMGXB3Q12766 1538 aa19.88■□□□□ 0.77
CTC1-204ENST00000578441 BAZ1AQ9NRL2 1556 aaPredicted RBP19.81■□□□□ 0.76
CTC1-204ENST00000578441 PEG3Q9GZU2 1588 aa19.76■□□□□ 0.75
CTC1-204ENST00000578441 BAZ1BQ9UIG0 1483 aaKnown RBP19.71■□□□□ 0.75
CTC1-204ENST00000578441 LAMC3Q9Y6N6 1575 aa19.59■□□□□ 0.73
CTC1-204ENST00000578441 NESP48681 1621 aa19.58■□□□□ 0.73
CTC1-204ENST00000578441 MROH2BQ7Z745 1585 aa19.57■□□□□ 0.72
CTC1-204ENST00000578441 THOC2Q8NI27 1593 aaKnown RBP19.53■□□□□ 0.72
CTC1-204ENST00000578441 PDS5BQ9NTI5 1447 aa19.44■□□□□ 0.7
CTC1-204ENST00000578441 KIF21AQ7Z4S6 1674 aa19.4■□□□□ 0.7
CTC1-204ENST00000578441 CADPSQ9ULU8 1353 aa19.35■□□□□ 0.69
CTC1-204ENST00000578441 TRIM41Q8WV44 630 aa19.33■□□□□ 0.68
CTC1-204ENST00000578441 WIZO95785 1651 aa19.33■□□□□ 0.68
CTC1-204ENST00000578441 MRC2Q9UBG0 1479 aa19.26■□□□□ 0.67
CTC1-204ENST00000578441 WDR62O43379 1518 aa19.24■□□□□ 0.67
CTC1-204ENST00000578441 CEP164Q9UPV0 1460 aa19.17■□□□□ 0.66
CTC1-204ENST00000578441 RSF1Q96T23 1441 aaPredicted RBP19.17■□□□□ 0.66
CTC1-204ENST00000578441 CFTRP13569 1480 aa19.15■□□□□ 0.66
CTC1-204ENST00000578441 TOP2AP11388 1531 aaKnown RBP19.15■□□□□ 0.66
CTC1-204ENST00000578441 FANCD2Q9BXW9 1451 aa19.13■□□□□ 0.65
CTC1-204ENST00000578441 OSCARQ8IYS5 282 aa19.1■□□□□ 0.65
CTC1-204ENST00000578441 PRDM2Q13029 1718 aa19.02■□□□□ 0.63
CTC1-204ENST00000578441 URB2Q14146 1524 aaKnown RBP18.95■□□□□ 0.62
CTC1-204ENST00000578441 CCDC88BA6NC98 1476 aa18.87■□□□□ 0.61
CTC1-204ENST00000578441 ABCC8Q09428 1581 aa18.81■□□□□ 0.6
CTC1-204ENST00000578441 IFT140Q96RY7 1462 aa18.81■□□□□ 0.6
CTC1-204ENST00000578441 RIMBP3CA6NJZ7 1639 aa18.81■□□□□ 0.6
CTC1-204ENST00000578441 RIMBP3BA6NNM3 1639 aa18.81■□□□□ 0.6
CTC1-204ENST00000578441 RIMBP3Q9UFD9 1639 aa18.81■□□□□ 0.6
CTC1-204ENST00000578441 TOPBP1Q92547 1522 aa18.76■□□□□ 0.59
CTC1-204ENST00000578441 ARHGEF11O15085 1522 aa18.74■□□□□ 0.59
CTC1-204ENST00000578441 DNMBPQ6XZF7 1577 aa18.72■□□□□ 0.59
CTC1-204ENST00000578441 ZNF608Q9ULD9 1512 aaPredicted RBP18.69■□□□□ 0.58
CTC1-204ENST00000578441 EIF4G3O43432 1585 aaKnown RBP18.66■□□□□ 0.58
CTC1-204ENST00000578441 TARBP1Q13395 1621 aaKnown RBP18.63■□□□□ 0.57
CTC1-204ENST00000578441 CYB5RLQ6IPT4 315 aa18.59■□□□□ 0.57
CTC1-204ENST00000578441 POLA1P09884 1462 aaPredicted RBP18.57■□□□□ 0.56
CTC1-204ENST00000578441 WDR97A6NE52 1622 aa18.54■□□□□ 0.56
CTC1-204ENST00000578441 AQRO60306 1485 aaKnown RBP eCLIP18.52■□□□□ 0.55
CTC1-204ENST00000578441 ARAP1Q96P48 1450 aa18.52■□□□□ 0.55
CTC1-204ENST00000578441 CHD1O14646 1710 aa18.52■□□□□ 0.55
CTC1-204ENST00000578441 TRHP20396 242 aaPredicted RBP18.5■□□□□ 0.55
CTC1-204ENST00000578441 SOGA1O94964 1423 aa18.46■□□□□ 0.55
CTC1-204ENST00000578441 FGD5Q6ZNL6 1462 aa18.43■□□□□ 0.54
CTC1-204ENST00000578441 RAD54L2Q9Y4B4 1467 aa18.43■□□□□ 0.54
CTC1-204ENST00000578441 CUX1P39880 1505 aa18.39■□□□□ 0.54
CTC1-204ENST00000578441 TDRD9Q8NDG6 1382 aaKnown RBP18.39■□□□□ 0.53
CTC1-204ENST00000578441 MAGI1Q96QZ7 1491 aaPredicted RBP18.39■□□□□ 0.53
CTC1-204ENST00000578441 FBLN2P98095 1184 aa18.36■□□□□ 0.53
CTC1-204ENST00000578441 SNAPC4Q5SXM2 1469 aa18.36■□□□□ 0.53
CTC1-204ENST00000578441 GRIN2BQ13224 1484 aa18.35■□□□□ 0.53
CTC1-204ENST00000578441 SYNJ1O43426 1573 aa18.33■□□□□ 0.52
CTC1-204ENST00000578441 CLASP1Q7Z460 1538 aa18.33■□□□□ 0.52
CTC1-204ENST00000578441 AEBP2Q6ZN18 517 aaPredicted RBP18.31■□□□□ 0.52
CTC1-204ENST00000578441 SYNJ2O15056 1496 aa18.31■□□□□ 0.52
CTC1-204ENST00000578441 CHMP7Q8WUX9 453 aaPredicted RBP18.29■□□□□ 0.52
CTC1-204ENST00000578441 PBRM1Q86U86 1689 aa18.28■□□□□ 0.52
CTC1-204ENST00000578441 ABCA10Q8WWZ4 1543 aa18.26■□□□□ 0.51
CTC1-204ENST00000578441 GAPVD1Q14C86 1478 aa18.26■□□□□ 0.51
CTC1-204ENST00000578441 ABCA5Q8WWZ7 1642 aa18.24■□□□□ 0.51
CTC1-204ENST00000578441 WRNQ14191 1432 aaPredicted RBP eCLIP18.18■□□□□ 0.5
CTC1-204ENST00000578441 BIVM-ERCC5R4GMW8 1640 aa18.16■□□□□ 0.5
CTC1-204ENST00000578441 SUPT5HO00267 1087 aaKnown RBP18.15■□□□□ 0.5
CTC1-204ENST00000578441 TOP2BQ02880 1626 aa18.15■□□□□ 0.5
CTC1-204ENST00000578441 GRIN2AQ12879 1464 aa18.11■□□□□ 0.49
CTC1-204ENST00000578441 ADAMTS12P58397 1594 aa18.09■□□□□ 0.49
CTC1-204ENST00000578441 ERICH3Q5RHP9 1530 aa18.06■□□□□ 0.48
CTC1-204ENST00000578441 NUP160Q12769 1436 aa18.06■□□□□ 0.48
CTC1-204ENST00000578441 FHAD1B1AJZ9 1412 aa18.05■□□□□ 0.48
CTC1-204ENST00000578441 CEP170Q5SW79 1584 aa18.02■□□□□ 0.48
CTC1-204ENST00000578441 SHROOM2Q13796 1616 aa18.01■□□□□ 0.47
CTC1-204ENST00000578441 ERCC6L2Q5T890 1561 aa17.95■□□□□ 0.46
CTC1-204ENST00000578441 RUSC2Q8N2Y8 1516 aa17.85■□□□□ 0.45
CTC1-204ENST00000578441 PRG4Q92954 1404 aaPredicted RBP17.84■□□□□ 0.45
CTC1-204ENST00000578441 KIF13AQ9H1H9 1805 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms