RNA–Protein interactions for RNA: ENST00000578223.1

PER1-206, Transcript of period circadian regulator 1, humanhuman

TSL 5

Gene PER1, Length 717 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PER1-206ENST00000578223 NISCHQ9Y2I1 1504 aa30.84■■■□□ 2.53
PER1-206ENST00000578223 CCDC180Q9P1Z9 1646 aa27.59■■■□□ 2.01
PER1-206ENST00000578223 ABCC9O60706 1549 aa27.36■■□□□ 1.97
PER1-206ENST00000578223 RB1CC1Q8TDY2 1594 aa26.16■■□□□ 1.78
PER1-206ENST00000578223 NACADO15069 1562 aa26.04■■□□□ 1.76
PER1-206ENST00000578223 DCAF8L2P0C7V8 631 aa25.91■■□□□ 1.74
PER1-206ENST00000578223 MYO15BQ96JP2 1530 aa25.78■■□□□ 1.72
PER1-206ENST00000578223 ZCCHC6Q5VYS8 1495 aaKnown RBP25.61■■□□□ 1.69
PER1-206ENST00000578223 UNC13AQ9UPW8 1703 aa25.54■■□□□ 1.68
PER1-206ENST00000578223 DCAF1Q9Y4B6 1507 aa25.52■■□□□ 1.68
PER1-206ENST00000578223 PABPN1Q86U42 306 aaKnown RBP eCLIP25.5■■□□□ 1.67
PER1-206ENST00000578223 DNAJC5BQ9UF47 199 aa25.48■■□□□ 1.67
PER1-206ENST00000578223 BICRAQ9NZM4 1560 aa25.38■■□□□ 1.65
PER1-206ENST00000578223 SCRIBQ14160 1630 aa25.12■■□□□ 1.61
PER1-206ENST00000578223 SHROOM4Q9ULL8 1493 aa25.1■■□□□ 1.61
PER1-206ENST00000578223 EIF4G1Q04637 1599 aaKnown RBP24.74■■□□□ 1.55
PER1-206ENST00000578223 CC2D2AQ9P2K1 1620 aa24.74■■□□□ 1.55
PER1-206ENST00000578223 CECR2Q9BXF3 1484 aa24.64■■□□□ 1.53
PER1-206ENST00000578223 NCAPD3P42695 1498 aa24.05■■□□□ 1.44
PER1-206ENST00000578223 SMARCA4P51532 1647 aa24.01■■□□□ 1.43
PER1-206ENST00000578223 ATAD2BQ9ULI0 1458 aa24■■□□□ 1.43
PER1-206ENST00000578223 SMARCA2P51531 1590 aa23.94■■□□□ 1.42
PER1-206ENST00000578223 BAZ1AQ9NRL2 1556 aaPredicted RBP23.93■■□□□ 1.42
PER1-206ENST00000578223 HMGXB3Q12766 1538 aa23.88■■□□□ 1.41
PER1-206ENST00000578223 PEG3Q9GZU2 1588 aa23.8■■□□□ 1.4
PER1-206ENST00000578223 BAZ1BQ9UIG0 1483 aaKnown RBP23.76■■□□□ 1.39
PER1-206ENST00000578223 MROH2BQ7Z745 1585 aa23.75■■□□□ 1.39
PER1-206ENST00000578223 ERCC6Q03468 1493 aa23.61■■□□□ 1.37
PER1-206ENST00000578223 NESP48681 1621 aa23.55■■□□□ 1.36
PER1-206ENST00000578223 CUX2O14529 1486 aa23.53■■□□□ 1.36
PER1-206ENST00000578223 WIZO95785 1651 aa23.46■■□□□ 1.35
PER1-206ENST00000578223 LAMC3Q9Y6N6 1575 aa23.46■■□□□ 1.35
PER1-206ENST00000578223 RSF1Q96T23 1441 aaPredicted RBP23.34■■□□□ 1.33
PER1-206ENST00000578223 CADPSQ9ULU8 1353 aa23.32■■□□□ 1.32
PER1-206ENST00000578223 PDS5BQ9NTI5 1447 aa23.32■■□□□ 1.32
PER1-206ENST00000578223 THOC2Q8NI27 1593 aaKnown RBP23.29■■□□□ 1.32
PER1-206ENST00000578223 DNAJC5Q9H3Z4 198 aa23.27■■□□□ 1.32
PER1-206ENST00000578223 KIF21AQ7Z4S6 1674 aa23.26■■□□□ 1.31
PER1-206ENST00000578223 TOP2AP11388 1531 aaKnown RBP23.21■■□□□ 1.31
PER1-206ENST00000578223 CFTRP13569 1480 aa23.1■■□□□ 1.29
PER1-206ENST00000578223 MRC2Q9UBG0 1479 aa23.1■■□□□ 1.29
PER1-206ENST00000578223 CEP164Q9UPV0 1460 aa23.05■■□□□ 1.28
PER1-206ENST00000578223 WDR62O43379 1518 aa23.04■■□□□ 1.28
PER1-206ENST00000578223 FANCD2Q9BXW9 1451 aa23.04■■□□□ 1.28
PER1-206ENST00000578223 CCDC88BA6NC98 1476 aa22.94■■□□□ 1.26
PER1-206ENST00000578223 PRDM2Q13029 1718 aa22.87■■□□□ 1.25
PER1-206ENST00000578223 URB2Q14146 1524 aaKnown RBP22.82■■□□□ 1.24
PER1-206ENST00000578223 TOPBP1Q92547 1522 aa22.63■■□□□ 1.21
PER1-206ENST00000578223 ABCC8Q09428 1581 aa22.63■■□□□ 1.21
PER1-206ENST00000578223 IFT140Q96RY7 1462 aa22.6■■□□□ 1.21
PER1-206ENST00000578223 DNMBPQ6XZF7 1577 aa22.56■■□□□ 1.2
PER1-206ENST00000578223 ZNF608Q9ULD9 1512 aaPredicted RBP22.51■■□□□ 1.19
PER1-206ENST00000578223 OSCARQ8IYS5 282 aa22.49■■□□□ 1.19
PER1-206ENST00000578223 SUPT5HO00267 1087 aaKnown RBP22.44■■□□□ 1.18
PER1-206ENST00000578223 POLA1P09884 1462 aaPredicted RBP22.41■■□□□ 1.18
PER1-206ENST00000578223 TARBP1Q13395 1621 aaKnown RBP22.4■■□□□ 1.18
PER1-206ENST00000578223 EIF4G3O43432 1585 aaKnown RBP22.39■■□□□ 1.18
PER1-206ENST00000578223 AQRO60306 1485 aaKnown RBP eCLIP22.34■■□□□ 1.171e-7■■■■■ 32.3
PER1-206ENST00000578223 SOGA1O94964 1423 aa22.31■■□□□ 1.16
PER1-206ENST00000578223 RAD54L2Q9Y4B4 1467 aa22.31■■□□□ 1.16
PER1-206ENST00000578223 CUX1P39880 1505 aa22.31■■□□□ 1.16
PER1-206ENST00000578223 TRIM41Q8WV44 630 aa22.3■■□□□ 1.16
PER1-206ENST00000578223 FGD5Q6ZNL6 1462 aa22.29■■□□□ 1.16
PER1-206ENST00000578223 WDR97A6NE52 1622 aa22.23■■□□□ 1.15
PER1-206ENST00000578223 TDRD9Q8NDG6 1382 aaKnown RBP22.23■■□□□ 1.15
PER1-206ENST00000578223 CHD1O14646 1710 aa22.18■■□□□ 1.14
PER1-206ENST00000578223 RIMBP3CA6NJZ7 1639 aa22.14■■□□□ 1.14
PER1-206ENST00000578223 RIMBP3BA6NNM3 1639 aa22.14■■□□□ 1.14
PER1-206ENST00000578223 RIMBP3Q9UFD9 1639 aa22.14■■□□□ 1.14
PER1-206ENST00000578223 FBLN2P98095 1184 aa22.13■■□□□ 1.13
PER1-206ENST00000578223 SNAPC4Q5SXM2 1469 aa22.11■■□□□ 1.13
PER1-206ENST00000578223 ARHGEF11O15085 1522 aa22.11■■□□□ 1.13
PER1-206ENST00000578223 GRIN2BQ13224 1484 aa22.1■■□□□ 1.13
PER1-206ENST00000578223 MAGI1Q96QZ7 1491 aaPredicted RBP22.09■■□□□ 1.13
PER1-206ENST00000578223 ABCA10Q8WWZ4 1543 aa22.08■■□□□ 1.13
PER1-206ENST00000578223 GAPVD1Q14C86 1478 aa22.05■■□□□ 1.12
PER1-206ENST00000578223 CHMP7Q8WUX9 453 aaPredicted RBP22.03■■□□□ 1.12
PER1-206ENST00000578223 WRNQ14191 1432 aaPredicted RBP eCLIP22.03■■□□□ 1.12
PER1-206ENST00000578223 BIVM-ERCC5R4GMW8 1640 aa22.02■■□□□ 1.11
PER1-206ENST00000578223 TOP2BQ02880 1626 aa22.01■■□□□ 1.11
PER1-206ENST00000578223 ABCA5Q8WWZ7 1642 aa22.01■■□□□ 1.11
PER1-206ENST00000578223 PBRM1Q86U86 1689 aa22.01■■□□□ 1.11
PER1-206ENST00000578223 SYNJ2O15056 1496 aa22■■□□□ 1.11
PER1-206ENST00000578223 SYNJ1O43426 1573 aa21.97■■□□□ 1.11
PER1-206ENST00000578223 CLASP1Q7Z460 1538 aa21.95■■□□□ 1.1
PER1-206ENST00000578223 CYB5RLQ6IPT4 315 aa21.93■■□□□ 1.1
PER1-206ENST00000578223 ARAP1Q96P48 1450 aa21.9■■□□□ 1.1
PER1-206ENST00000578223 ADAMTS12P58397 1594 aa21.82■■□□□ 1.08
PER1-206ENST00000578223 GRIN2AQ12879 1464 aa21.81■■□□□ 1.08
PER1-206ENST00000578223 ERICH3Q5RHP9 1530 aa21.8■■□□□ 1.08
PER1-206ENST00000578223 FHAD1B1AJZ9 1412 aa21.79■■□□□ 1.08
PER1-206ENST00000578223 NUP160Q12769 1436 aa21.74■■□□□ 1.07
PER1-206ENST00000578223 CEP170Q5SW79 1584 aa21.71■■□□□ 1.07
PER1-206ENST00000578223 SHROOM2Q13796 1616 aa21.61■■□□□ 1.05
PER1-206ENST00000578223 TRHP20396 242 aaPredicted RBP21.6■■□□□ 1.05
PER1-206ENST00000578223 KIF27Q86VH2 1401 aa21.6■■□□□ 1.05
PER1-206ENST00000578223 ERCC6L2Q5T890 1561 aa21.6■■□□□ 1.05
PER1-206ENST00000578223 IGF1RP08069 1367 aa21.57■■□□□ 1.04
PER1-206ENST00000578223 JPH4Q96JJ6 628 aa21.52■■□□□ 1.04
PER1-206ENST00000578223 CUL7Q14999 1698 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms