RNA–Protein interactions for RNA: ENST00000578216.1

AP003396.5-201, humanhuman

TSL 5 BASIC

Gene AP003396.5, Length 632 nt, Biotype sense intronic.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003396.5-201ENST00000578216 NISCHQ9Y2I1 1504 aa27.57■■■□□ 2
AP003396.5-201ENST00000578216 CCDC180Q9P1Z9 1646 aa24.74■■□□□ 1.55
AP003396.5-201ENST00000578216 ABCC9O60706 1549 aa24.72■■□□□ 1.55
AP003396.5-201ENST00000578216 RB1CC1Q8TDY2 1594 aa23.58■■□□□ 1.37
AP003396.5-201ENST00000578216 NACADO15069 1562 aa23.41■■□□□ 1.34
AP003396.5-201ENST00000578216 DCAF8L2P0C7V8 631 aa23.39■■□□□ 1.33
AP003396.5-201ENST00000578216 MYO15BQ96JP2 1530 aa23.07■■□□□ 1.28
AP003396.5-201ENST00000578216 DNAJC5BQ9UF47 199 aa23.05■■□□□ 1.28
AP003396.5-201ENST00000578216 PABPN1Q86U42 306 aaKnown RBP eCLIP23.03■■□□□ 1.28
AP003396.5-201ENST00000578216 UNC13AQ9UPW8 1703 aa22.9■■□□□ 1.26
AP003396.5-201ENST00000578216 ZCCHC6Q5VYS8 1495 aaKnown RBP22.85■■□□□ 1.25
AP003396.5-201ENST00000578216 DCAF1Q9Y4B6 1507 aa22.77■■□□□ 1.24
AP003396.5-201ENST00000578216 BICRAQ9NZM4 1560 aa22.76■■□□□ 1.23
AP003396.5-201ENST00000578216 SHROOM4Q9ULL8 1493 aa22.6■■□□□ 1.21
AP003396.5-201ENST00000578216 SCRIBQ14160 1630 aa22.56■■□□□ 1.2
AP003396.5-201ENST00000578216 CC2D2AQ9P2K1 1620 aa22.31■■□□□ 1.16
AP003396.5-201ENST00000578216 CECR2Q9BXF3 1484 aa22.28■■□□□ 1.16
AP003396.5-201ENST00000578216 EIF4G1Q04637 1599 aaKnown RBP22.28■■□□□ 1.16
AP003396.5-201ENST00000578216 NCAPD3P42695 1498 aa21.58■■□□□ 1.04
AP003396.5-201ENST00000578216 SMARCA2P51531 1590 aa21.52■■□□□ 1.04
AP003396.5-201ENST00000578216 ATAD2BQ9ULI0 1458 aa21.52■■□□□ 1.03
AP003396.5-201ENST00000578216 SMARCA4P51532 1647 aa21.5■■□□□ 1.03
AP003396.5-201ENST00000578216 BAZ1AQ9NRL2 1556 aaPredicted RBP21.44■■□□□ 1.02
AP003396.5-201ENST00000578216 ERCC6Q03468 1493 aa21.44■■□□□ 1.02
AP003396.5-201ENST00000578216 HMGXB3Q12766 1538 aa21.44■■□□□ 1.02
AP003396.5-201ENST00000578216 BAZ1BQ9UIG0 1483 aaKnown RBP21.38■■□□□ 1.01
AP003396.5-201ENST00000578216 CUX2O14529 1486 aa21.33■■□□□ 1.01
AP003396.5-201ENST00000578216 PEG3Q9GZU2 1588 aa21.26■□□□□ 0.99
AP003396.5-201ENST00000578216 DNAJC5Q9H3Z4 198 aa21.24■□□□□ 0.99
AP003396.5-201ENST00000578216 MROH2BQ7Z745 1585 aa21.21■□□□□ 0.99
AP003396.5-201ENST00000578216 NESP48681 1621 aa21.19■□□□□ 0.98
AP003396.5-201ENST00000578216 LAMC3Q9Y6N6 1575 aa21.12■□□□□ 0.97
AP003396.5-201ENST00000578216 PDS5BQ9NTI5 1447 aa21.05■□□□□ 0.96
AP003396.5-201ENST00000578216 THOC2Q8NI27 1593 aaKnown RBP20.97■□□□□ 0.95
AP003396.5-201ENST00000578216 CADPSQ9ULU8 1353 aa20.96■□□□□ 0.95
AP003396.5-201ENST00000578216 WIZO95785 1651 aa20.96■□□□□ 0.95
AP003396.5-201ENST00000578216 KIF21AQ7Z4S6 1674 aa20.93■□□□□ 0.94
AP003396.5-201ENST00000578216 MRC2Q9UBG0 1479 aa20.83■□□□□ 0.93
AP003396.5-201ENST00000578216 RSF1Q96T23 1441 aaPredicted RBP20.8■□□□□ 0.92
AP003396.5-201ENST00000578216 CEP164Q9UPV0 1460 aa20.77■□□□□ 0.92
AP003396.5-201ENST00000578216 TOP2AP11388 1531 aaKnown RBP20.75■□□□□ 0.91
AP003396.5-201ENST00000578216 WDR62O43379 1518 aa20.73■□□□□ 0.91
AP003396.5-201ENST00000578216 FANCD2Q9BXW9 1451 aa20.72■□□□□ 0.91
AP003396.5-201ENST00000578216 CFTRP13569 1480 aa20.69■□□□□ 0.9
AP003396.5-201ENST00000578216 URB2Q14146 1524 aaKnown RBP20.49■□□□□ 0.87
AP003396.5-201ENST00000578216 CCDC88BA6NC98 1476 aa20.49■□□□□ 0.87
AP003396.5-201ENST00000578216 PRDM2Q13029 1718 aa20.47■□□□□ 0.87
AP003396.5-201ENST00000578216 TRIM41Q8WV44 630 aa20.42■□□□□ 0.86
AP003396.5-201ENST00000578216 OSCARQ8IYS5 282 aa20.4■□□□□ 0.86
AP003396.5-201ENST00000578216 IFT140Q96RY7 1462 aa20.35■□□□□ 0.85
AP003396.5-201ENST00000578216 ABCC8Q09428 1581 aa20.34■□□□□ 0.85
AP003396.5-201ENST00000578216 TOPBP1Q92547 1522 aa20.31■□□□□ 0.84
AP003396.5-201ENST00000578216 DNMBPQ6XZF7 1577 aa20.25■□□□□ 0.83
AP003396.5-201ENST00000578216 ZNF608Q9ULD9 1512 aaPredicted RBP20.23■□□□□ 0.83
AP003396.5-201ENST00000578216 EIF4G3O43432 1585 aaKnown RBP20.15■□□□□ 0.82
AP003396.5-201ENST00000578216 POLA1P09884 1462 aaPredicted RBP20.09■□□□□ 0.81
AP003396.5-201ENST00000578216 AQRO60306 1485 aaKnown RBP eCLIP20.08■□□□□ 0.81
AP003396.5-201ENST00000578216 TARBP1Q13395 1621 aaKnown RBP20.08■□□□□ 0.8
AP003396.5-201ENST00000578216 FBLN2P98095 1184 aa20.06■□□□□ 0.8
AP003396.5-201ENST00000578216 SOGA1O94964 1423 aa20.05■□□□□ 0.8
AP003396.5-201ENST00000578216 RIMBP3CA6NJZ7 1639 aa20.04■□□□□ 0.8
AP003396.5-201ENST00000578216 RIMBP3BA6NNM3 1639 aa20.04■□□□□ 0.8
AP003396.5-201ENST00000578216 RIMBP3Q9UFD9 1639 aa20.04■□□□□ 0.8
AP003396.5-201ENST00000578216 RAD54L2Q9Y4B4 1467 aa20.01■□□□□ 0.79
AP003396.5-201ENST00000578216 SUPT5HO00267 1087 aaKnown RBP20.01■□□□□ 0.79
AP003396.5-201ENST00000578216 ARHGEF11O15085 1522 aa20■□□□□ 0.79
AP003396.5-201ENST00000578216 FGD5Q6ZNL6 1462 aa19.99■□□□□ 0.79
AP003396.5-201ENST00000578216 TDRD9Q8NDG6 1382 aaKnown RBP19.98■□□□□ 0.79
AP003396.5-201ENST00000578216 CHD1O14646 1710 aa19.98■□□□□ 0.79
AP003396.5-201ENST00000578216 WDR97A6NE52 1622 aa19.96■□□□□ 0.79
AP003396.5-201ENST00000578216 CUX1P39880 1505 aa19.94■□□□□ 0.78
AP003396.5-201ENST00000578216 CHMP7Q8WUX9 453 aaPredicted RBP19.91■□□□□ 0.78
AP003396.5-201ENST00000578216 SNAPC4Q5SXM2 1469 aa19.91■□□□□ 0.78
AP003396.5-201ENST00000578216 CYB5RLQ6IPT4 315 aa19.9■□□□□ 0.78
AP003396.5-201ENST00000578216 GRIN2BQ13224 1484 aa19.88■□□□□ 0.77
AP003396.5-201ENST00000578216 MAGI1Q96QZ7 1491 aaPredicted RBP19.88■□□□□ 0.77
AP003396.5-201ENST00000578216 SYNJ1O43426 1573 aa19.83■□□□□ 0.76
AP003396.5-201ENST00000578216 GAPVD1Q14C86 1478 aa19.81■□□□□ 0.76
AP003396.5-201ENST00000578216 SYNJ2O15056 1496 aa19.8■□□□□ 0.76
AP003396.5-201ENST00000578216 ARAP1Q96P48 1450 aa19.78■□□□□ 0.76
AP003396.5-201ENST00000578216 ABCA10Q8WWZ4 1543 aa19.76■□□□□ 0.75
AP003396.5-201ENST00000578216 PBRM1Q86U86 1689 aa19.75■□□□□ 0.75
AP003396.5-201ENST00000578216 TRHP20396 242 aaPredicted RBP19.75■□□□□ 0.75
AP003396.5-201ENST00000578216 CLASP1Q7Z460 1538 aa19.75■□□□□ 0.75
AP003396.5-201ENST00000578216 WRNQ14191 1432 aaPredicted RBP eCLIP19.75■□□□□ 0.75
AP003396.5-201ENST00000578216 ABCA5Q8WWZ7 1642 aa19.69■□□□□ 0.74
AP003396.5-201ENST00000578216 TOP2BQ02880 1626 aa19.65■□□□□ 0.74
AP003396.5-201ENST00000578216 BIVM-ERCC5R4GMW8 1640 aa19.63■□□□□ 0.73
AP003396.5-201ENST00000578216 GRIN2AQ12879 1464 aa19.6■□□□□ 0.73
AP003396.5-201ENST00000578216 ADAMTS12P58397 1594 aa19.57■□□□□ 0.72
AP003396.5-201ENST00000578216 FHAD1B1AJZ9 1412 aa19.57■□□□□ 0.72
AP003396.5-201ENST00000578216 ERICH3Q5RHP9 1530 aa19.53■□□□□ 0.72
AP003396.5-201ENST00000578216 NUP160Q12769 1436 aa19.51■□□□□ 0.71
AP003396.5-201ENST00000578216 CEP170Q5SW79 1584 aa19.48■□□□□ 0.71
AP003396.5-201ENST00000578216 ERCC6L2Q5T890 1561 aa19.4■□□□□ 0.7
AP003396.5-201ENST00000578216 SHROOM2Q13796 1616 aa19.39■□□□□ 0.69
AP003396.5-201ENST00000578216 PRG4Q92954 1404 aaPredicted RBP19.36■□□□□ 0.69
AP003396.5-201ENST00000578216 JPH4Q96JJ6 628 aa19.36■□□□□ 0.69
AP003396.5-201ENST00000578216 KIF27Q86VH2 1401 aa19.35■□□□□ 0.69
AP003396.5-201ENST00000578216 RUSC2Q8N2Y8 1516 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms