RNA–Protein interactions for RNA: ENST00000578158.5

TNFAIP1-204, Transcript of TNF alpha induced protein 1, humanhuman

TSL 4

Gene TNFAIP1, Length 536 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-204ENST00000578158 NISCHQ9Y2I1 1504 aa30.13■■■□□ 2.41
TNFAIP1-204ENST00000578158 ABCC9O60706 1549 aa27.42■■□□□ 1.98
TNFAIP1-204ENST00000578158 DNAJC5BQ9UF47 199 aa26.88■■□□□ 1.89
TNFAIP1-204ENST00000578158 CCDC180Q9P1Z9 1646 aa26.54■■□□□ 1.84
TNFAIP1-204ENST00000578158 DNAJC5Q9H3Z4 198 aa25.5■■□□□ 1.67
TNFAIP1-204ENST00000578158 RB1CC1Q8TDY2 1594 aa25.49■■□□□ 1.67
TNFAIP1-204ENST00000578158 PABPN1Q86U42 306 aaKnown RBP eCLIP25.48■■□□□ 1.67
TNFAIP1-204ENST00000578158 DCAF8L2P0C7V8 631 aa25.14■■□□□ 1.62
TNFAIP1-204ENST00000578158 ZCCHC6Q5VYS8 1495 aaKnown RBP25.13■■□□□ 1.61
TNFAIP1-204ENST00000578158 NACADO15069 1562 aa25.08■■□□□ 1.61
TNFAIP1-204ENST00000578158 MYO15BQ96JP2 1530 aa24.96■■□□□ 1.59
TNFAIP1-204ENST00000578158 DCAF1Q9Y4B6 1507 aa24.96■■□□□ 1.59
TNFAIP1-204ENST00000578158 CECR2Q9BXF3 1484 aa24.83■■□□□ 1.56
TNFAIP1-204ENST00000578158 BICRAQ9NZM4 1560 aa24.8■■□□□ 1.56
TNFAIP1-204ENST00000578158 UNC13AQ9UPW8 1703 aa24.65■■□□□ 1.54
TNFAIP1-204ENST00000578158 CC2D2AQ9P2K1 1620 aa24.61■■□□□ 1.53
TNFAIP1-204ENST00000578158 SHROOM4Q9ULL8 1493 aa24.36■■□□□ 1.49
TNFAIP1-204ENST00000578158 EIF4G1Q04637 1599 aaKnown RBP24.29■■□□□ 1.48
TNFAIP1-204ENST00000578158 SCRIBQ14160 1630 aa24.24■■□□□ 1.47
TNFAIP1-204ENST00000578158 CUX2O14529 1486 aa24.07■■□□□ 1.44
TNFAIP1-204ENST00000578158 TRIM41Q8WV44 630 aa23.9■■□□□ 1.42
TNFAIP1-204ENST00000578158 ERCC6Q03468 1493 aa23.75■■□□□ 1.39
TNFAIP1-204ENST00000578158 BAZ1AQ9NRL2 1556 aaPredicted RBP23.31■■□□□ 1.32
TNFAIP1-204ENST00000578158 NCAPD3P42695 1498 aa23.27■■□□□ 1.32
TNFAIP1-204ENST00000578158 SMARCA4P51532 1647 aa23.25■■□□□ 1.31
TNFAIP1-204ENST00000578158 NESP48681 1621 aa23.22■■□□□ 1.31
TNFAIP1-204ENST00000578158 MROH2BQ7Z745 1585 aa23.21■■□□□ 1.31
TNFAIP1-204ENST00000578158 ATAD2BQ9ULI0 1458 aa23.11■■□□□ 1.29
TNFAIP1-204ENST00000578158 RSF1Q96T23 1441 aaPredicted RBP23.11■■□□□ 1.29
TNFAIP1-204ENST00000578158 SMARCA2P51531 1590 aa23.07■■□□□ 1.28
TNFAIP1-204ENST00000578158 THOC2Q8NI27 1593 aaKnown RBP23.07■■□□□ 1.28
TNFAIP1-204ENST00000578158 PEG3Q9GZU2 1588 aa23.06■■□□□ 1.28
TNFAIP1-204ENST00000578158 WIZO95785 1651 aa22.93■■□□□ 1.26
TNFAIP1-204ENST00000578158 OSCARQ8IYS5 282 aa22.93■■□□□ 1.26
TNFAIP1-204ENST00000578158 HMGXB3Q12766 1538 aa22.92■■□□□ 1.26
TNFAIP1-204ENST00000578158 BAZ1BQ9UIG0 1483 aaKnown RBP22.91■■□□□ 1.26
TNFAIP1-204ENST00000578158 PDS5BQ9NTI5 1447 aa22.83■■□□□ 1.25
TNFAIP1-204ENST00000578158 SUPT5HO00267 1087 aaKnown RBP22.81■■□□□ 1.24
TNFAIP1-204ENST00000578158 LAMC3Q9Y6N6 1575 aa22.79■■□□□ 1.24
TNFAIP1-204ENST00000578158 AEBP2Q6ZN18 517 aaPredicted RBP22.76■■□□□ 1.23
TNFAIP1-204ENST00000578158 TOP2AP11388 1531 aaKnown RBP22.72■■□□□ 1.23
TNFAIP1-204ENST00000578158 KIF21AQ7Z4S6 1674 aa22.65■■□□□ 1.22
TNFAIP1-204ENST00000578158 MRC2Q9UBG0 1479 aa22.64■■□□□ 1.21
TNFAIP1-204ENST00000578158 TRHP20396 242 aaPredicted RBP22.58■■□□□ 1.21
TNFAIP1-204ENST00000578158 WDR62O43379 1518 aa22.57■■□□□ 1.2
TNFAIP1-204ENST00000578158 CADPSQ9ULU8 1353 aa22.54■■□□□ 1.2
TNFAIP1-204ENST00000578158 CCDC88BA6NC98 1476 aa22.53■■□□□ 1.2
TNFAIP1-204ENST00000578158 RIMBP3CA6NJZ7 1639 aa22.51■■□□□ 1.19
TNFAIP1-204ENST00000578158 RIMBP3BA6NNM3 1639 aa22.51■■□□□ 1.19
TNFAIP1-204ENST00000578158 RIMBP3Q9UFD9 1639 aa22.51■■□□□ 1.19
TNFAIP1-204ENST00000578158 CYB5RLQ6IPT4 315 aa22.49■■□□□ 1.19
TNFAIP1-204ENST00000578158 ARHGEF11O15085 1522 aa22.41■■□□□ 1.18
TNFAIP1-204ENST00000578158 CFTRP13569 1480 aa22.34■■□□□ 1.17
TNFAIP1-204ENST00000578158 CEP164Q9UPV0 1460 aa22.31■■□□□ 1.16
TNFAIP1-204ENST00000578158 FANCD2Q9BXW9 1451 aa22.22■■□□□ 1.15
TNFAIP1-204ENST00000578158 ARAP1Q96P48 1450 aa22.13■■□□□ 1.13
TNFAIP1-204ENST00000578158 URB2Q14146 1524 aaKnown RBP22.09■■□□□ 1.13
TNFAIP1-204ENST00000578158 ZNF608Q9ULD9 1512 aaPredicted RBP22.03■■□□□ 1.12
TNFAIP1-204ENST00000578158 PRDM2Q13029 1718 aa22.03■■□□□ 1.12
TNFAIP1-204ENST00000578158 ILDR1Q86SU0 546 aaPredicted RBP21.98■■□□□ 1.11
TNFAIP1-204ENST00000578158 IFT140Q96RY7 1462 aa21.94■■□□□ 1.1
TNFAIP1-204ENST00000578158 FBLN2P98095 1184 aa21.88■■□□□ 1.09
TNFAIP1-204ENST00000578158 ABCC8Q09428 1581 aa21.87■■□□□ 1.09
TNFAIP1-204ENST00000578158 TOPBP1Q92547 1522 aa21.8■■□□□ 1.08
TNFAIP1-204ENST00000578158 DNMBPQ6XZF7 1577 aa21.77■■□□□ 1.08
TNFAIP1-204ENST00000578158 WRNQ14191 1432 aaPredicted RBP eCLIP21.76■■□□□ 1.07
TNFAIP1-204ENST00000578158 CUX1P39880 1505 aa21.74■■□□□ 1.07
TNFAIP1-204ENST00000578158 AQRO60306 1485 aaKnown RBP eCLIP21.73■■□□□ 1.071e-11■■■■□ 24.7
TNFAIP1-204ENST00000578158 EIF4G3O43432 1585 aaKnown RBP21.7■■□□□ 1.06
TNFAIP1-204ENST00000578158 CHD1O14646 1710 aa21.65■■□□□ 1.06
TNFAIP1-204ENST00000578158 TOP2BQ02880 1626 aa21.63■■□□□ 1.05
TNFAIP1-204ENST00000578158 POLA1P09884 1462 aaPredicted RBP21.63■■□□□ 1.05
TNFAIP1-204ENST00000578158 SOGA1O94964 1423 aa21.63■■□□□ 1.05
TNFAIP1-204ENST00000578158 FGD5Q6ZNL6 1462 aa21.62■■□□□ 1.05
TNFAIP1-204ENST00000578158 SYNJ1O43426 1573 aa21.61■■□□□ 1.05
TNFAIP1-204ENST00000578158 BIVM-ERCC5R4GMW8 1640 aa21.59■■□□□ 1.05
TNFAIP1-204ENST00000578158 RAD54L2Q9Y4B4 1467 aa21.55■■□□□ 1.04
TNFAIP1-204ENST00000578158 CLASP1Q7Z460 1538 aa21.54■■□□□ 1.04
TNFAIP1-204ENST00000578158 CHMP7Q8WUX9 453 aaPredicted RBP21.53■■□□□ 1.04
TNFAIP1-204ENST00000578158 CHIC1Q5VXU3 224 aa21.52■■□□□ 1.04
TNFAIP1-204ENST00000578158 TARBP1Q13395 1621 aaKnown RBP21.5■■□□□ 1.03
TNFAIP1-204ENST00000578158 GAPVD1Q14C86 1478 aa21.49■■□□□ 1.03
TNFAIP1-204ENST00000578158 KDM4FA0A1W2PPD8 638 aa21.48■■□□□ 1.03
TNFAIP1-204ENST00000578158 ABCA10Q8WWZ4 1543 aa21.45■■□□□ 1.02
TNFAIP1-204ENST00000578158 TDRD9Q8NDG6 1382 aaKnown RBP21.45■■□□□ 1.02
TNFAIP1-204ENST00000578158 SNAPC4Q5SXM2 1469 aa21.4■■□□□ 1.02
TNFAIP1-204ENST00000578158 WDR97A6NE52 1622 aa21.37■■□□□ 1.01
TNFAIP1-204ENST00000578158 KIF27Q86VH2 1401 aa21.3■■□□□ 1
TNFAIP1-204ENST00000578158 MAGI1Q96QZ7 1491 aaPredicted RBP21.29■■□□□ 1
TNFAIP1-204ENST00000578158 GRIN2BQ13224 1484 aa21.28■■□□□ 1
TNFAIP1-204ENST00000578158 ABCA5Q8WWZ7 1642 aa21.26■□□□□ 0.99
TNFAIP1-204ENST00000578158 SYNJ2O15056 1496 aa21.26■□□□□ 0.99
TNFAIP1-204ENST00000578158 IGF1RP08069 1367 aa21.23■□□□□ 0.99
TNFAIP1-204ENST00000578158 ERICH3Q5RHP9 1530 aa21.19■□□□□ 0.98
TNFAIP1-204ENST00000578158 RUSC2Q8N2Y8 1516 aa21.19■□□□□ 0.98
TNFAIP1-204ENST00000578158 FAM69CQ0P6D2 419 aa21.18■□□□□ 0.98
TNFAIP1-204ENST00000578158 ERCC6L2Q5T890 1561 aa21.14■□□□□ 0.98
TNFAIP1-204ENST00000578158 PBRM1Q86U86 1689 aa21.14■□□□□ 0.97
TNFAIP1-204ENST00000578158 EEA1Q15075 1411 aa21.13■□□□□ 0.97
TNFAIP1-204ENST00000578158 CSRNP3Q8WYN3 585 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms