RNA–Protein interactions for RNA: ENST00000578150.1

TTC39C-205, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 3

Gene TTC39C, Length 499 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-205ENST00000578150 NISCHQ9Y2I1 1504 aa48.21■■■■■ 5.31
TTC39C-205ENST00000578150 CCDC180Q9P1Z9 1646 aa43.19■■■■■ 4.5
TTC39C-205ENST00000578150 ABCC9O60706 1549 aa42.85■■■■■ 4.45
TTC39C-205ENST00000578150 RB1CC1Q8TDY2 1594 aa40.98■■■■■ 4.15
TTC39C-205ENST00000578150 NACADO15069 1562 aa40.78■■■■■ 4.12
TTC39C-205ENST00000578150 DCAF8L2P0C7V8 631 aa40.51■■■■■ 4.08
TTC39C-205ENST00000578150 MYO15BQ96JP2 1530 aa40.35■■■■■ 4.05
TTC39C-205ENST00000578150 ZCCHC6Q5VYS8 1495 aaKnown RBP40.01■■■■■ 4
TTC39C-205ENST00000578150 UNC13AQ9UPW8 1703 aa39.97■■■■□ 3.99
TTC39C-205ENST00000578150 DNAJC5BQ9UF47 199 aa39.93■■■■□ 3.98
TTC39C-205ENST00000578150 PABPN1Q86U42 306 aaKnown RBP eCLIP39.92■■■■□ 3.98
TTC39C-205ENST00000578150 DCAF1Q9Y4B6 1507 aa39.91■■■■□ 3.98
TTC39C-205ENST00000578150 BICRAQ9NZM4 1560 aa39.72■■■■□ 3.95
TTC39C-205ENST00000578150 SHROOM4Q9ULL8 1493 aa39.35■■■■□ 3.89
TTC39C-205ENST00000578150 SCRIBQ14160 1630 aa39.28■■■■□ 3.88
TTC39C-205ENST00000578150 CC2D2AQ9P2K1 1620 aa38.75■■■■□ 3.79
TTC39C-205ENST00000578150 EIF4G1Q04637 1599 aaKnown RBP38.74■■■■□ 3.79
TTC39C-205ENST00000578150 CECR2Q9BXF3 1484 aa38.61■■■■□ 3.77
TTC39C-205ENST00000578150 NCAPD3P42695 1498 aa37.64■■■■□ 3.62
TTC39C-205ENST00000578150 SMARCA4P51532 1647 aa37.54■■■■□ 3.6
TTC39C-205ENST00000578150 ATAD2BQ9ULI0 1458 aa37.53■■■■□ 3.6
TTC39C-205ENST00000578150 SMARCA2P51531 1590 aa37.47■■■■□ 3.59
TTC39C-205ENST00000578150 BAZ1AQ9NRL2 1556 aaPredicted RBP37.43■■■■□ 3.58
TTC39C-205ENST00000578150 HMGXB3Q12766 1538 aa37.38■■■■□ 3.57
TTC39C-205ENST00000578150 PEG3Q9GZU2 1588 aa37.22■■■■□ 3.55
TTC39C-205ENST00000578150 BAZ1BQ9UIG0 1483 aaKnown RBP37.18■■■■□ 3.54
TTC39C-205ENST00000578150 MROH2BQ7Z745 1585 aa37.11■■■■□ 3.53
TTC39C-205ENST00000578150 ERCC6Q03468 1493 aa37.02■■■■□ 3.52
TTC39C-205ENST00000578150 CUX2O14529 1486 aa36.92■■■■□ 3.5
TTC39C-205ENST00000578150 NESP48681 1621 aa36.86■■■■□ 3.49
TTC39C-205ENST00000578150 LAMC3Q9Y6N6 1575 aa36.74■■■■□ 3.47
TTC39C-205ENST00000578150 WIZO95785 1651 aa36.66■■■■□ 3.46
TTC39C-205ENST00000578150 DNAJC5Q9H3Z4 198 aa36.56■■■■□ 3.44
TTC39C-205ENST00000578150 PDS5BQ9NTI5 1447 aa36.53■■■■□ 3.44
TTC39C-205ENST00000578150 CADPSQ9ULU8 1353 aa36.49■■■■□ 3.43
TTC39C-205ENST00000578150 THOC2Q8NI27 1593 aaKnown RBP36.49■■■■□ 3.43
TTC39C-205ENST00000578150 RSF1Q96T23 1441 aaPredicted RBP36.46■■■■□ 3.43
TTC39C-205ENST00000578150 KIF21AQ7Z4S6 1674 aa36.41■■■■□ 3.42
TTC39C-205ENST00000578150 TOP2AP11388 1531 aaKnown RBP36.28■■■■□ 3.4
TTC39C-205ENST00000578150 MRC2Q9UBG0 1479 aa36.18■■■■□ 3.38
TTC39C-205ENST00000578150 CFTRP13569 1480 aa36.13■■■■□ 3.37
TTC39C-205ENST00000578150 WDR62O43379 1518 aa36.08■■■■□ 3.37
TTC39C-205ENST00000578150 CEP164Q9UPV0 1460 aa36.08■■■■□ 3.37
TTC39C-205ENST00000578150 FANCD2Q9BXW9 1451 aa36.05■■■■□ 3.36
TTC39C-205ENST00000578150 CCDC88BA6NC98 1476 aa35.84■■■■□ 3.33
TTC39C-205ENST00000578150 PRDM2Q13029 1718 aa35.77■■■■□ 3.32
TTC39C-205ENST00000578150 URB2Q14146 1524 aaKnown RBP35.73■■■■□ 3.31
TTC39C-205ENST00000578150 ABCC8Q09428 1581 aa35.42■■■■□ 3.26
TTC39C-205ENST00000578150 TOPBP1Q92547 1522 aa35.4■■■■□ 3.26
TTC39C-205ENST00000578150 IFT140Q96RY7 1462 aa35.37■■■■□ 3.25
TTC39C-205ENST00000578150 DNMBPQ6XZF7 1577 aa35.3■■■■□ 3.24
TTC39C-205ENST00000578150 OSCARQ8IYS5 282 aa35.25■■■■□ 3.23
TTC39C-205ENST00000578150 ZNF608Q9ULD9 1512 aaPredicted RBP35.22■■■■□ 3.23
TTC39C-205ENST00000578150 TARBP1Q13395 1621 aaKnown RBP35.06■■■■□ 3.2
TTC39C-205ENST00000578150 EIF4G3O43432 1585 aaKnown RBP35.06■■■■□ 3.2
TTC39C-205ENST00000578150 POLA1P09884 1462 aaPredicted RBP35.05■■■■□ 3.2
TTC39C-205ENST00000578150 TRIM41Q8WV44 630 aa35■■■■□ 3.19
TTC39C-205ENST00000578150 SUPT5HO00267 1087 aaKnown RBP34.98■■■■□ 3.19
TTC39C-205ENST00000578150 AQRO60306 1485 aaKnown RBP eCLIP34.94■■■■□ 3.18
TTC39C-205ENST00000578150 SOGA1O94964 1423 aa34.9■■■■□ 3.18
TTC39C-205ENST00000578150 RAD54L2Q9Y4B4 1467 aa34.88■■■■□ 3.17
TTC39C-205ENST00000578150 CUX1P39880 1505 aa34.86■■■■□ 3.17
TTC39C-205ENST00000578150 FGD5Q6ZNL6 1462 aa34.86■■■■□ 3.17
TTC39C-205ENST00000578150 WDR97A6NE52 1622 aa34.81■■■■□ 3.16
TTC39C-205ENST00000578150 TDRD9Q8NDG6 1382 aaKnown RBP34.76■■■■□ 3.16
TTC39C-205ENST00000578150 CHD1O14646 1710 aa34.72■■■■□ 3.15
TTC39C-205ENST00000578150 RIMBP3CA6NJZ7 1639 aa34.71■■■■□ 3.15
TTC39C-205ENST00000578150 RIMBP3BA6NNM3 1639 aa34.71■■■■□ 3.15
TTC39C-205ENST00000578150 RIMBP3Q9UFD9 1639 aa34.71■■■■□ 3.15
TTC39C-205ENST00000578150 ARHGEF11O15085 1522 aa34.65■■■■□ 3.14
TTC39C-205ENST00000578150 FBLN2P98095 1184 aa34.65■■■■□ 3.14
TTC39C-205ENST00000578150 SNAPC4Q5SXM2 1469 aa34.61■■■■□ 3.13
TTC39C-205ENST00000578150 GRIN2BQ13224 1484 aa34.59■■■■□ 3.13
TTC39C-205ENST00000578150 MAGI1Q96QZ7 1491 aaPredicted RBP34.58■■■■□ 3.13
TTC39C-205ENST00000578150 ABCA10Q8WWZ4 1543 aa34.52■■■■□ 3.12
TTC39C-205ENST00000578150 GAPVD1Q14C86 1478 aa34.5■■■■□ 3.11
TTC39C-205ENST00000578150 CHMP7Q8WUX9 453 aaPredicted RBP34.49■■■■□ 3.11
TTC39C-205ENST00000578150 SYNJ2O15056 1496 aa34.45■■■■□ 3.1
TTC39C-205ENST00000578150 WRNQ14191 1432 aaPredicted RBP eCLIP34.44■■■■□ 3.1
TTC39C-205ENST00000578150 PBRM1Q86U86 1689 aa34.43■■■■□ 3.1
TTC39C-205ENST00000578150 ABCA5Q8WWZ7 1642 aa34.42■■■■□ 3.1
TTC39C-205ENST00000578150 TOP2BQ02880 1626 aa34.41■■■■□ 3.1
TTC39C-205ENST00000578150 SYNJ1O43426 1573 aa34.4■■■■□ 3.1
TTC39C-205ENST00000578150 BIVM-ERCC5R4GMW8 1640 aa34.4■■■■□ 3.1
TTC39C-205ENST00000578150 CLASP1Q7Z460 1538 aa34.38■■■■□ 3.09
TTC39C-205ENST00000578150 CYB5RLQ6IPT4 315 aa34.36■■■■□ 3.09
TTC39C-205ENST00000578150 ARAP1Q96P48 1450 aa34.32■■■■□ 3.08
TTC39C-205ENST00000578150 ADAMTS12P58397 1594 aa34.14■■■■□ 3.06
TTC39C-205ENST00000578150 GRIN2AQ12879 1464 aa34.14■■■■□ 3.06
TTC39C-205ENST00000578150 ERICH3Q5RHP9 1530 aa34.1■■■■□ 3.05
TTC39C-205ENST00000578150 FHAD1B1AJZ9 1412 aa34.09■■■■□ 3.05
TTC39C-205ENST00000578150 NUP160Q12769 1436 aa34.03■■■■□ 3.04
TTC39C-205ENST00000578150 CEP170Q5SW79 1584 aa33.97■■■■□ 3.03
TTC39C-205ENST00000578150 TRHP20396 242 aaPredicted RBP33.9■■■■□ 3.02
TTC39C-205ENST00000578150 SHROOM2Q13796 1616 aa33.83■■■■□ 3.01
TTC39C-205ENST00000578150 ERCC6L2Q5T890 1561 aa33.8■■■■□ 3
TTC39C-205ENST00000578150 KIF27Q86VH2 1401 aa33.77■■■■□ 3
TTC39C-205ENST00000578150 IGF1RP08069 1367 aa33.7■■■□□ 2.98
TTC39C-205ENST00000578150 JPH4Q96JJ6 628 aa33.66■■■□□ 2.98
TTC39C-205ENST00000578150 CUL7Q14999 1698 aa33.65■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms