RNA–Protein interactions for RNA: ENST00000578107.5

RNF138-204, Transcript of ring finger protein 138, humanhuman

TSL 2

Gene RNF138, Length 493 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138-204ENST00000578107 NISCHQ9Y2I1 1504 aa33.98■■■■□ 3.03
RNF138-204ENST00000578107 ABCC9O60706 1549 aa30.6■■■□□ 2.49
RNF138-204ENST00000578107 CCDC180Q9P1Z9 1646 aa30.59■■■□□ 2.49
RNF138-204ENST00000578107 RB1CC1Q8TDY2 1594 aa29.12■■■□□ 2.25
RNF138-204ENST00000578107 NACADO15069 1562 aa28.89■■■□□ 2.22
RNF138-204ENST00000578107 DNAJC5BQ9UF47 199 aa28.72■■■□□ 2.19
RNF138-204ENST00000578107 DCAF8L2P0C7V8 631 aa28.59■■■□□ 2.17
RNF138-204ENST00000578107 UNC13AQ9UPW8 1703 aa28.51■■■□□ 2.15
RNF138-204ENST00000578107 MYO15BQ96JP2 1530 aa28.48■■■□□ 2.15
RNF138-204ENST00000578107 PABPN1Q86U42 306 aaKnown RBP eCLIP28.42■■■□□ 2.14
RNF138-204ENST00000578107 BICRAQ9NZM4 1560 aa28.29■■■□□ 2.12
RNF138-204ENST00000578107 ZCCHC6Q5VYS8 1495 aaKnown RBP28.17■■■□□ 2.1
RNF138-204ENST00000578107 DCAF1Q9Y4B6 1507 aa28.08■■■□□ 2.09
RNF138-204ENST00000578107 SHROOM4Q9ULL8 1493 aa27.91■■■□□ 2.06
RNF138-204ENST00000578107 SCRIBQ14160 1630 aa27.85■■■□□ 2.05
RNF138-204ENST00000578107 CC2D2AQ9P2K1 1620 aa27.67■■■□□ 2.02
RNF138-204ENST00000578107 EIF4G1Q04637 1599 aaKnown RBP27.6■■■□□ 2.01
RNF138-204ENST00000578107 CECR2Q9BXF3 1484 aa27.57■■■□□ 2
RNF138-204ENST00000578107 NCAPD3P42695 1498 aa26.65■■□□□ 1.86
RNF138-204ENST00000578107 ATAD2BQ9ULI0 1458 aa26.56■■□□□ 1.84
RNF138-204ENST00000578107 SMARCA4P51532 1647 aa26.56■■□□□ 1.84
RNF138-204ENST00000578107 SMARCA2P51531 1590 aa26.51■■□□□ 1.83
RNF138-204ENST00000578107 HMGXB3Q12766 1538 aa26.49■■□□□ 1.83
RNF138-204ENST00000578107 CUX2O14529 1486 aa26.43■■□□□ 1.82
RNF138-204ENST00000578107 ERCC6Q03468 1493 aa26.43■■□□□ 1.82
RNF138-204ENST00000578107 DNAJC5Q9H3Z4 198 aa26.43■■□□□ 1.82
RNF138-204ENST00000578107 BAZ1AQ9NRL2 1556 aaPredicted RBP26.39■■□□□ 1.82
RNF138-204ENST00000578107 BAZ1BQ9UIG0 1483 aaKnown RBP26.31■■□□□ 1.8
RNF138-204ENST00000578107 PEG3Q9GZU2 1588 aa26.3■■□□□ 1.8
RNF138-204ENST00000578107 NESP48681 1621 aa26.27■■□□□ 1.8
RNF138-204ENST00000578107 MROH2BQ7Z745 1585 aa26.19■■□□□ 1.78
RNF138-204ENST00000578107 LAMC3Q9Y6N6 1575 aa26.1■■□□□ 1.77
RNF138-204ENST00000578107 THOC2Q8NI27 1593 aaKnown RBP26.08■■□□□ 1.77
RNF138-204ENST00000578107 KIF21AQ7Z4S6 1674 aa25.98■■□□□ 1.75
RNF138-204ENST00000578107 PDS5BQ9NTI5 1447 aa25.9■■□□□ 1.74
RNF138-204ENST00000578107 WIZO95785 1651 aa25.88■■□□□ 1.73
RNF138-204ENST00000578107 CADPSQ9ULU8 1353 aa25.82■■□□□ 1.72
RNF138-204ENST00000578107 MRC2Q9UBG0 1479 aa25.72■■□□□ 1.71
RNF138-204ENST00000578107 WDR62O43379 1518 aa25.68■■□□□ 1.7
RNF138-204ENST00000578107 CEP164Q9UPV0 1460 aa25.6■■□□□ 1.69
RNF138-204ENST00000578107 RSF1Q96T23 1441 aaPredicted RBP25.59■■□□□ 1.69
RNF138-204ENST00000578107 TOP2AP11388 1531 aaKnown RBP25.56■■□□□ 1.68
RNF138-204ENST00000578107 FANCD2Q9BXW9 1451 aa25.55■■□□□ 1.68
RNF138-204ENST00000578107 CFTRP13569 1480 aa25.53■■□□□ 1.68
RNF138-204ENST00000578107 PRDM2Q13029 1718 aa25.36■■□□□ 1.65
RNF138-204ENST00000578107 URB2Q14146 1524 aaKnown RBP25.36■■□□□ 1.65
RNF138-204ENST00000578107 TRIM41Q8WV44 630 aa25.23■■□□□ 1.63
RNF138-204ENST00000578107 CCDC88BA6NC98 1476 aa25.22■■□□□ 1.63
RNF138-204ENST00000578107 OSCARQ8IYS5 282 aa25.11■■□□□ 1.61
RNF138-204ENST00000578107 IFT140Q96RY7 1462 aa25.09■■□□□ 1.61
RNF138-204ENST00000578107 TOPBP1Q92547 1522 aa25.07■■□□□ 1.6
RNF138-204ENST00000578107 ZNF608Q9ULD9 1512 aaPredicted RBP25.06■■□□□ 1.6
RNF138-204ENST00000578107 DNMBPQ6XZF7 1577 aa25■■□□□ 1.59
RNF138-204ENST00000578107 ABCC8Q09428 1581 aa24.98■■□□□ 1.59
RNF138-204ENST00000578107 EIF4G3O43432 1585 aaKnown RBP24.97■■□□□ 1.59
RNF138-204ENST00000578107 RIMBP3CA6NJZ7 1639 aa24.91■■□□□ 1.58
RNF138-204ENST00000578107 RIMBP3BA6NNM3 1639 aa24.91■■□□□ 1.58
RNF138-204ENST00000578107 RIMBP3Q9UFD9 1639 aa24.91■■□□□ 1.58
RNF138-204ENST00000578107 TARBP1Q13395 1621 aaKnown RBP24.89■■□□□ 1.57
RNF138-204ENST00000578107 POLA1P09884 1462 aaPredicted RBP24.82■■□□□ 1.56
RNF138-204ENST00000578107 ARHGEF11O15085 1522 aa24.81■■□□□ 1.56
RNF138-204ENST00000578107 AQRO60306 1485 aaKnown RBP eCLIP24.79■■□□□ 1.56
RNF138-204ENST00000578107 CHD1O14646 1710 aa24.79■■□□□ 1.56
RNF138-204ENST00000578107 RAD54L2Q9Y4B4 1467 aa24.7■■□□□ 1.54
RNF138-204ENST00000578107 SOGA1O94964 1423 aa24.65■■□□□ 1.54
RNF138-204ENST00000578107 WDR97A6NE52 1622 aa24.64■■□□□ 1.53
RNF138-204ENST00000578107 FGD5Q6ZNL6 1462 aa24.64■■□□□ 1.53
RNF138-204ENST00000578107 CUX1P39880 1505 aa24.62■■□□□ 1.53
RNF138-204ENST00000578107 TDRD9Q8NDG6 1382 aaKnown RBP24.61■■□□□ 1.53
RNF138-204ENST00000578107 FBLN2P98095 1184 aa24.59■■□□□ 1.53
RNF138-204ENST00000578107 SNAPC4Q5SXM2 1469 aa24.58■■□□□ 1.52
RNF138-204ENST00000578107 ARAP1Q96P48 1450 aa24.57■■□□□ 1.52
RNF138-204ENST00000578107 CYB5RLQ6IPT4 315 aa24.54■■□□□ 1.52
RNF138-204ENST00000578107 MAGI1Q96QZ7 1491 aaPredicted RBP24.51■■□□□ 1.51
RNF138-204ENST00000578107 CLASP1Q7Z460 1538 aa24.5■■□□□ 1.51
RNF138-204ENST00000578107 GRIN2BQ13224 1484 aa24.48■■□□□ 1.51
RNF138-204ENST00000578107 SYNJ1O43426 1573 aa24.46■■□□□ 1.51
RNF138-204ENST00000578107 PBRM1Q86U86 1689 aa24.44■■□□□ 1.5
RNF138-204ENST00000578107 SYNJ2O15056 1496 aa24.42■■□□□ 1.5
RNF138-204ENST00000578107 CHMP7Q8WUX9 453 aaPredicted RBP24.4■■□□□ 1.5
RNF138-204ENST00000578107 GAPVD1Q14C86 1478 aa24.38■■□□□ 1.49
RNF138-204ENST00000578107 ABCA5Q8WWZ7 1642 aa24.37■■□□□ 1.49
RNF138-204ENST00000578107 ABCA10Q8WWZ4 1543 aa24.35■■□□□ 1.49
RNF138-204ENST00000578107 SUPT5HO00267 1087 aaKnown RBP24.31■■□□□ 1.48
RNF138-204ENST00000578107 TRHP20396 242 aaPredicted RBP24.28■■□□□ 1.48
RNF138-204ENST00000578107 BIVM-ERCC5R4GMW8 1640 aa24.23■■□□□ 1.47
RNF138-204ENST00000578107 WRNQ14191 1432 aaPredicted RBP eCLIP24.22■■□□□ 1.47
RNF138-204ENST00000578107 TOP2BQ02880 1626 aa24.21■■□□□ 1.47
RNF138-204ENST00000578107 ADAMTS12P58397 1594 aa24.2■■□□□ 1.46
RNF138-204ENST00000578107 GRIN2AQ12879 1464 aa24.18■■□□□ 1.46
RNF138-204ENST00000578107 CEP170Q5SW79 1584 aa24.12■■□□□ 1.45
RNF138-204ENST00000578107 NUP160Q12769 1436 aa24.1■■□□□ 1.45
RNF138-204ENST00000578107 ERCC6L2Q5T890 1561 aa24.09■■□□□ 1.45
RNF138-204ENST00000578107 FHAD1B1AJZ9 1412 aa24.06■■□□□ 1.44
RNF138-204ENST00000578107 ERICH3Q5RHP9 1530 aa24.05■■□□□ 1.44
RNF138-204ENST00000578107 SHROOM2Q13796 1616 aa24.04■■□□□ 1.44
RNF138-204ENST00000578107 RUSC2Q8N2Y8 1516 aa23.87■■□□□ 1.41
RNF138-204ENST00000578107 PRG4Q92954 1404 aaPredicted RBP23.84■■□□□ 1.41
RNF138-204ENST00000578107 KIF13AQ9H1H9 1805 aa23.76■■□□□ 1.39
RNF138-204ENST00000578107 JPH4Q96JJ6 628 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 154.6 ms