RNA–Protein interactions for RNA: ENST00000578086.2

TRIM16L-213, Transcript of tripartite motif containing 16 like, humanhuman

TSL 5

Gene TRIM16L, Length 197 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM16L-213ENST00000578086 NISCHQ9Y2I1 1504 aa20.83■□□□□ 0.92
TRIM16L-213ENST00000578086 CCDC180Q9P1Z9 1646 aa18.21■□□□□ 0.51
TRIM16L-213ENST00000578086 ZCCHC6Q5VYS8 1495 aaKnown RBP17.57■□□□□ 0.4
TRIM16L-213ENST00000578086 DCAF1Q9Y4B6 1507 aa17.25■□□□□ 0.35
TRIM16L-213ENST00000578086 SHROOM4Q9ULL8 1493 aa17.04■□□□□ 0.32
TRIM16L-213ENST00000578086 MYO15BQ96JP2 1530 aa16.96■□□□□ 0.3
TRIM16L-213ENST00000578086 DCAF8L2P0C7V8 631 aa16.89■□□□□ 0.29
TRIM16L-213ENST00000578086 ABCC9O60706 1549 aa16.87■□□□□ 0.29
TRIM16L-213ENST00000578086 NACADO15069 1562 aa16.8■□□□□ 0.28
TRIM16L-213ENST00000578086 SCRIBQ14160 1630 aa16.71■□□□□ 0.27
TRIM16L-213ENST00000578086 RB1CC1Q8TDY2 1594 aa16.62■□□□□ 0.25
TRIM16L-213ENST00000578086 UNC13AQ9UPW8 1703 aa16.48■□□□□ 0.23
TRIM16L-213ENST00000578086 SUPT5HO00267 1087 aaKnown RBP16.4■□□□□ 0.22
TRIM16L-213ENST00000578086 RSF1Q96T23 1441 aaPredicted RBP16.19■□□□□ 0.18
TRIM16L-213ENST00000578086 BICRAQ9NZM4 1560 aa16.17■□□□□ 0.18
TRIM16L-213ENST00000578086 CECR2Q9BXF3 1484 aa16.16■□□□□ 0.18
TRIM16L-213ENST00000578086 MROH2BQ7Z745 1585 aa16.11■□□□□ 0.17
TRIM16L-213ENST00000578086 BAZ1AQ9NRL2 1556 aaPredicted RBP16.08■□□□□ 0.16
TRIM16L-213ENST00000578086 WIZO95785 1651 aa16.05■□□□□ 0.16
TRIM16L-213ENST00000578086 SMARCA4P51532 1647 aa16.05■□□□□ 0.16
TRIM16L-213ENST00000578086 TOP2AP11388 1531 aaKnown RBP15.87■□□□□ 0.13
TRIM16L-213ENST00000578086 CHIC1Q5VXU3 224 aa15.85■□□□□ 0.13
TRIM16L-213ENST00000578086 PABPN1Q86U42 306 aaKnown RBP eCLIP15.85■□□□□ 0.13
TRIM16L-213ENST00000578086 PEG3Q9GZU2 1588 aa15.82■□□□□ 0.12
TRIM16L-213ENST00000578086 EIF4G1Q04637 1599 aaKnown RBP15.79■□□□□ 0.12
TRIM16L-213ENST00000578086 SMARCA2P51531 1590 aa15.74■□□□□ 0.11
TRIM16L-213ENST00000578086 CCDC88BA6NC98 1476 aa15.63■□□□□ 0.09
TRIM16L-213ENST00000578086 ATAD2BQ9ULI0 1458 aa15.63■□□□□ 0.09
TRIM16L-213ENST00000578086 BAZ1BQ9UIG0 1483 aaKnown RBP15.56■□□□□ 0.08
TRIM16L-213ENST00000578086 HMGXB3Q12766 1538 aa15.53■□□□□ 0.08
TRIM16L-213ENST00000578086 NCAPD3P42695 1498 aa15.44■□□□□ 0.06
TRIM16L-213ENST00000578086 ABCC8Q09428 1581 aa15.43■□□□□ 0.06
TRIM16L-213ENST00000578086 TRIM41Q8WV44 630 aa15.38■□□□□ 0.05
TRIM16L-213ENST00000578086 PRDM2Q13029 1718 aa15.36■□□□□ 0.05
TRIM16L-213ENST00000578086 CC2D2AQ9P2K1 1620 aa15.35■□□□□ 0.05
TRIM16L-213ENST00000578086 SYNJ1O43426 1573 aa15.28■□□□□ 0.04
TRIM16L-213ENST00000578086 BIVM-ERCC5R4GMW8 1640 aa15.22■□□□□ 0.03
TRIM16L-213ENST00000578086 WRNQ14191 1432 aaPredicted RBP eCLIP15.22■□□□□ 0.03
TRIM16L-213ENST00000578086 LOC105371045A0A1W2PR82 267 aa15.2■□□□□ 0.02
TRIM16L-213ENST00000578086 TOP2BQ02880 1626 aa15.18■□□□□ 0.02
TRIM16L-213ENST00000578086 CFTRP13569 1480 aa15.17■□□□□ 0.02
TRIM16L-213ENST00000578086 FAM9AQ8IZU1 332 aaPredicted RBP15.14■□□□□ 0.01
TRIM16L-213ENST00000578086 EEA1Q15075 1411 aa15.11■□□□□ 0.01
TRIM16L-213ENST00000578086 SOGA1O94964 1423 aa15.09■□□□□ 0.01
TRIM16L-213ENST00000578086 CUX1P39880 1505 aa15.07■□□□□ 0
TRIM16L-213ENST00000578086 RUSC2Q8N2Y8 1516 aa15.06■□□□□ 0
TRIM16L-213ENST00000578086 KIF21BO75037 1637 aa15.03■□□□□ -0
TRIM16L-213ENST00000578086 CADPSQ9ULU8 1353 aa15.02■□□□□ -0
TRIM16L-213ENST00000578086 LAMC3Q9Y6N6 1575 aa14.96□□□□□ -0.01
TRIM16L-213ENST00000578086 GOLGA3Q08378 1498 aa14.95□□□□□ -0.02
TRIM16L-213ENST00000578086 FANCD2Q9BXW9 1451 aa14.92□□□□□ -0.02
TRIM16L-213ENST00000578086 CEP164Q9UPV0 1460 aa14.92□□□□□ -0.02
TRIM16L-213ENST00000578086 NESP48681 1621 aa14.91□□□□□ -0.02
TRIM16L-213ENST00000578086 CSRNP3Q8WYN3 585 aa14.9□□□□□ -0.02
TRIM16L-213ENST00000578086 EHMT2Q96KQ7 1210 aa14.9□□□□□ -0.02
TRIM16L-213ENST00000578086 DNMBPQ6XZF7 1577 aa14.9□□□□□ -0.02
TRIM16L-213ENST00000578086 TNIKQ9UKE5 1360 aa14.87□□□□□ -0.03
TRIM16L-213ENST00000578086 KIF21AQ7Z4S6 1674 aa14.87□□□□□ -0.03
TRIM16L-213ENST00000578086 CEP162Q5TB80 1403 aa14.85□□□□□ -0.03
TRIM16L-213ENST00000578086 ERICH3Q5RHP9 1530 aa14.85□□□□□ -0.03
TRIM16L-213ENST00000578086 FGD5Q6ZNL6 1462 aa14.84□□□□□ -0.03
TRIM16L-213ENST00000578086 WDR97A6NE52 1622 aa14.82□□□□□ -0.04
TRIM16L-213ENST00000578086 RAPGEF2Q9Y4G8 1499 aa14.81□□□□□ -0.04
TRIM16L-213ENST00000578086 TOPBP1Q92547 1522 aa14.81□□□□□ -0.04
TRIM16L-213ENST00000578086 KIF27Q86VH2 1401 aa14.8□□□□□ -0.04
TRIM16L-213ENST00000578086 PRXQ9BXM0 1461 aa14.79□□□□□ -0.04
TRIM16L-213ENST00000578086 URB2Q14146 1524 aaKnown RBP14.76□□□□□ -0.05
TRIM16L-213ENST00000578086 DNAJC5BQ9UF47 199 aa14.76□□□□□ -0.05
TRIM16L-213ENST00000578086 CUX2O14529 1486 aa14.75□□□□□ -0.05
TRIM16L-213ENST00000578086 POLA1P09884 1462 aaPredicted RBP14.74□□□□□ -0.05
TRIM16L-213ENST00000578086 PDS5BQ9NTI5 1447 aa14.73□□□□□ -0.05
TRIM16L-213ENST00000578086 ABCA10Q8WWZ4 1543 aa14.71□□□□□ -0.05
TRIM16L-213ENST00000578086 UBTFP17480 764 aaKnown RBP14.7□□□□□ -0.06
TRIM16L-213ENST00000578086 PCGF6Q9BYE7 350 aa14.7□□□□□ -0.06
TRIM16L-213ENST00000578086 ABCA5Q8WWZ7 1642 aa14.68□□□□□ -0.06
TRIM16L-213ENST00000578086 CLIP1P30622 1438 aa14.67□□□□□ -0.06
TRIM16L-213ENST00000578086 RAD54L2Q9Y4B4 1467 aa14.67□□□□□ -0.06
TRIM16L-213ENST00000578086 CUL7Q14999 1698 aa14.67□□□□□ -0.06
TRIM16L-213ENST00000578086 TRIM26Q12899 539 aaPredicted RBP14.66□□□□□ -0.06
TRIM16L-213ENST00000578086 TARBP1Q13395 1621 aaKnown RBP14.64□□□□□ -0.07
TRIM16L-213ENST00000578086 IGF1RP08069 1367 aa14.61□□□□□ -0.07
TRIM16L-213ENST00000578086 MRC2Q9UBG0 1479 aa14.61□□□□□ -0.07
TRIM16L-213ENST00000578086 CTTNBP2Q8WZ74 1663 aa14.61□□□□□ -0.07
TRIM16L-213ENST00000578086 PBRM1Q86U86 1689 aa14.6□□□□□ -0.07
TRIM16L-213ENST00000578086 VPS8Q8N3P4 1428 aa14.59□□□□□ -0.07
TRIM16L-213ENST00000578086 ARAP1Q96P48 1450 aa14.59□□□□□ -0.07
TRIM16L-213ENST00000578086 WDR62O43379 1518 aa14.57□□□□□ -0.08
TRIM16L-213ENST00000578086 CARMIL1Q5VZK9 1371 aa14.55□□□□□ -0.08
TRIM16L-213ENST00000578086 THOC2Q8NI27 1593 aaKnown RBP14.55□□□□□ -0.08
TRIM16L-213ENST00000578086 ARHGAP35Q9NRY4 1499 aa14.51□□□□□ -0.09
TRIM16L-213ENST00000578086 GAPVD1Q14C86 1478 aa14.5□□□□□ -0.09
TRIM16L-213ENST00000578086 HRCP23327 699 aa14.5□□□□□ -0.09
TRIM16L-213ENST00000578086 PPARGC1BQ86YN6 1023 aaKnown RBP14.48□□□□□ -0.09
TRIM16L-213ENST00000578086 ADAMTS12P58397 1594 aa14.47□□□□□ -0.09
TRIM16L-213ENST00000578086 TDRD9Q8NDG6 1382 aaKnown RBP14.44□□□□□ -0.1
TRIM16L-213ENST00000578086 IFT140Q96RY7 1462 aa14.44□□□□□ -0.1
TRIM16L-213ENST00000578086 EFCAB5A4FU69 1503 aa14.43□□□□□ -0.1
TRIM16L-213ENST00000578086 ERCC6Q03468 1493 aa14.43□□□□□ -0.1
TRIM16L-213ENST00000578086 EIF4G3O43432 1585 aaKnown RBP14.42□□□□□ -0.1
TRIM16L-213ENST00000578086 CFAP43Q8NDM7 1665 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms