RNA–Protein interactions for RNA: ENST00000578085.1

CCR7-202, Transcript of C-C motif chemokine receptor 7, humanhuman

TSL 3

Gene CCR7, Length 787 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR7-202ENST00000578085 NISCHQ9Y2I1 1504 aa18.83■□□□□ 0.6
CCR7-202ENST00000578085 ABCC9O60706 1549 aa17.01■□□□□ 0.31
CCR7-202ENST00000578085 CCDC180Q9P1Z9 1646 aa16.89■□□□□ 0.29
CCR7-202ENST00000578085 RB1CC1Q8TDY2 1594 aa16.1■□□□□ 0.17
CCR7-202ENST00000578085 DNAJC5BQ9UF47 199 aa16.04■□□□□ 0.16
CCR7-202ENST00000578085 NACADO15069 1562 aa15.97■□□□□ 0.15
CCR7-202ENST00000578085 DCAF8L2P0C7V8 631 aa15.84■□□□□ 0.13
CCR7-202ENST00000578085 PABPN1Q86U42 306 aaKnown RBP eCLIP15.81■□□□□ 0.12
CCR7-202ENST00000578085 UNC13AQ9UPW8 1703 aa15.77■□□□□ 0.12
CCR7-202ENST00000578085 MYO15BQ96JP2 1530 aa15.73■□□□□ 0.11
CCR7-202ENST00000578085 BICRAQ9NZM4 1560 aa15.72■□□□□ 0.11
CCR7-202ENST00000578085 ZCCHC6Q5VYS8 1495 aaKnown RBP15.62■□□□□ 0.09
CCR7-202ENST00000578085 DCAF1Q9Y4B6 1507 aa15.53■□□□□ 0.08
CCR7-202ENST00000578085 SCRIBQ14160 1630 aa15.44■□□□□ 0.06
CCR7-202ENST00000578085 SHROOM4Q9ULL8 1493 aa15.41■□□□□ 0.06
CCR7-202ENST00000578085 CC2D2AQ9P2K1 1620 aa15.34■□□□□ 0.05
CCR7-202ENST00000578085 EIF4G1Q04637 1599 aaKnown RBP15.3■□□□□ 0.04
CCR7-202ENST00000578085 CECR2Q9BXF3 1484 aa15.3■□□□□ 0.04
CCR7-202ENST00000578085 NCAPD3P42695 1498 aa14.76□□□□□ -0.05
CCR7-202ENST00000578085 ATAD2BQ9ULI0 1458 aa14.74□□□□□ -0.05
CCR7-202ENST00000578085 SMARCA4P51532 1647 aa14.7□□□□□ -0.06
CCR7-202ENST00000578085 DNAJC5Q9H3Z4 198 aa14.69□□□□□ -0.06
CCR7-202ENST00000578085 HMGXB3Q12766 1538 aa14.66□□□□□ -0.06
CCR7-202ENST00000578085 SMARCA2P51531 1590 aa14.64□□□□□ -0.07
CCR7-202ENST00000578085 CUX2O14529 1486 aa14.63□□□□□ -0.07
CCR7-202ENST00000578085 ERCC6Q03468 1493 aa14.63□□□□□ -0.07
CCR7-202ENST00000578085 NESP48681 1621 aa14.62□□□□□ -0.07
CCR7-202ENST00000578085 BAZ1AQ9NRL2 1556 aaPredicted RBP14.6□□□□□ -0.07
CCR7-202ENST00000578085 BAZ1BQ9UIG0 1483 aaKnown RBP14.57□□□□□ -0.08
CCR7-202ENST00000578085 PEG3Q9GZU2 1588 aa14.56□□□□□ -0.08
CCR7-202ENST00000578085 MROH2BQ7Z745 1585 aa14.55□□□□□ -0.08
CCR7-202ENST00000578085 THOC2Q8NI27 1593 aaKnown RBP14.47□□□□□ -0.09
CCR7-202ENST00000578085 LAMC3Q9Y6N6 1575 aa14.43□□□□□ -0.1
CCR7-202ENST00000578085 KIF21AQ7Z4S6 1674 aa14.39□□□□□ -0.11
CCR7-202ENST00000578085 WIZO95785 1651 aa14.35□□□□□ -0.11
CCR7-202ENST00000578085 PDS5BQ9NTI5 1447 aa14.32□□□□□ -0.12
CCR7-202ENST00000578085 CADPSQ9ULU8 1353 aa14.31□□□□□ -0.12
CCR7-202ENST00000578085 MRC2Q9UBG0 1479 aa14.25□□□□□ -0.13
CCR7-202ENST00000578085 WDR62O43379 1518 aa14.24□□□□□ -0.13
CCR7-202ENST00000578085 RSF1Q96T23 1441 aaPredicted RBP14.2□□□□□ -0.14
CCR7-202ENST00000578085 CEP164Q9UPV0 1460 aa14.17□□□□□ -0.14
CCR7-202ENST00000578085 FANCD2Q9BXW9 1451 aa14.16□□□□□ -0.14
CCR7-202ENST00000578085 TOP2AP11388 1531 aaKnown RBP14.15□□□□□ -0.14
CCR7-202ENST00000578085 CFTRP13569 1480 aa14.15□□□□□ -0.14
CCR7-202ENST00000578085 URB2Q14146 1524 aaKnown RBP14.1□□□□□ -0.15
CCR7-202ENST00000578085 TRIM41Q8WV44 630 aa14.02□□□□□ -0.17
CCR7-202ENST00000578085 CCDC88BA6NC98 1476 aa13.99□□□□□ -0.17
CCR7-202ENST00000578085 PRDM2Q13029 1718 aa13.96□□□□□ -0.17
CCR7-202ENST00000578085 ZNF608Q9ULD9 1512 aaPredicted RBP13.94□□□□□ -0.18
CCR7-202ENST00000578085 TOPBP1Q92547 1522 aa13.9□□□□□ -0.18
CCR7-202ENST00000578085 OSCARQ8IYS5 282 aa13.9□□□□□ -0.18
CCR7-202ENST00000578085 IFT140Q96RY7 1462 aa13.88□□□□□ -0.19
CCR7-202ENST00000578085 EIF4G3O43432 1585 aaKnown RBP13.83□□□□□ -0.19
CCR7-202ENST00000578085 DNMBPQ6XZF7 1577 aa13.83□□□□□ -0.2
CCR7-202ENST00000578085 RIMBP3CA6NJZ7 1639 aa13.82□□□□□ -0.2
CCR7-202ENST00000578085 RIMBP3BA6NNM3 1639 aa13.82□□□□□ -0.2
CCR7-202ENST00000578085 RIMBP3Q9UFD9 1639 aa13.82□□□□□ -0.2
CCR7-202ENST00000578085 TARBP1Q13395 1621 aaKnown RBP13.79□□□□□ -0.2
CCR7-202ENST00000578085 ABCC8Q09428 1581 aa13.78□□□□□ -0.2
CCR7-202ENST00000578085 ARHGEF11O15085 1522 aa13.77□□□□□ -0.21
CCR7-202ENST00000578085 AQRO60306 1485 aaKnown RBP eCLIP13.76□□□□□ -0.21
CCR7-202ENST00000578085 POLA1P09884 1462 aaPredicted RBP13.76□□□□□ -0.21
CCR7-202ENST00000578085 RAD54L2Q9Y4B4 1467 aa13.73□□□□□ -0.21
CCR7-202ENST00000578085 CHD1O14646 1710 aa13.72□□□□□ -0.21
CCR7-202ENST00000578085 TDRD9Q8NDG6 1382 aaKnown RBP13.67□□□□□ -0.22
CCR7-202ENST00000578085 FGD5Q6ZNL6 1462 aa13.67□□□□□ -0.22
CCR7-202ENST00000578085 CUX1P39880 1505 aa13.66□□□□□ -0.22
CCR7-202ENST00000578085 ARAP1Q96P48 1450 aa13.66□□□□□ -0.22
CCR7-202ENST00000578085 SOGA1O94964 1423 aa13.65□□□□□ -0.22
CCR7-202ENST00000578085 SNAPC4Q5SXM2 1469 aa13.63□□□□□ -0.23
CCR7-202ENST00000578085 FBLN2P98095 1184 aa13.62□□□□□ -0.23
CCR7-202ENST00000578085 CYB5RLQ6IPT4 315 aa13.62□□□□□ -0.23
CCR7-202ENST00000578085 CLASP1Q7Z460 1538 aa13.59□□□□□ -0.23
CCR7-202ENST00000578085 WDR97A6NE52 1622 aa13.59□□□□□ -0.23
CCR7-202ENST00000578085 GRIN2BQ13224 1484 aa13.55□□□□□ -0.24
CCR7-202ENST00000578085 MAGI1Q96QZ7 1491 aaPredicted RBP13.55□□□□□ -0.24
CCR7-202ENST00000578085 SYNJ2O15056 1496 aa13.52□□□□□ -0.25
CCR7-202ENST00000578085 PBRM1Q86U86 1689 aa13.51□□□□□ -0.25
CCR7-202ENST00000578085 SYNJ1O43426 1573 aa13.51□□□□□ -0.25
CCR7-202ENST00000578085 ABCA5Q8WWZ7 1642 aa13.5□□□□□ -0.25
CCR7-202ENST00000578085 GAPVD1Q14C86 1478 aa13.49□□□□□ -0.25
CCR7-202ENST00000578085 CHMP7Q8WUX9 453 aaPredicted RBP13.49□□□□□ -0.25
CCR7-202ENST00000578085 ABCA10Q8WWZ4 1543 aa13.49□□□□□ -0.25
CCR7-202ENST00000578085 SUPT5HO00267 1087 aaKnown RBP13.47□□□□□ -0.25
CCR7-202ENST00000578085 TRHP20396 242 aaPredicted RBP13.45□□□□□ -0.26
CCR7-202ENST00000578085 ERCC6L2Q5T890 1561 aa13.41□□□□□ -0.26
CCR7-202ENST00000578085 ADAMTS12P58397 1594 aa13.41□□□□□ -0.26
CCR7-202ENST00000578085 BIVM-ERCC5R4GMW8 1640 aa13.4□□□□□ -0.26
CCR7-202ENST00000578085 GRIN2AQ12879 1464 aa13.4□□□□□ -0.26
CCR7-202ENST00000578085 TOP2BQ02880 1626 aa13.39□□□□□ -0.27
CCR7-202ENST00000578085 WRNQ14191 1432 aaPredicted RBP eCLIP13.39□□□□□ -0.27
CCR7-202ENST00000578085 CEP170Q5SW79 1584 aa13.38□□□□□ -0.27
CCR7-202ENST00000578085 NUP160Q12769 1436 aa13.37□□□□□ -0.27
CCR7-202ENST00000578085 SHROOM2Q13796 1616 aa13.31□□□□□ -0.28
CCR7-202ENST00000578085 FHAD1B1AJZ9 1412 aa13.31□□□□□ -0.28
CCR7-202ENST00000578085 ERICH3Q5RHP9 1530 aa13.29□□□□□ -0.28
CCR7-202ENST00000578085 RUSC2Q8N2Y8 1516 aa13.23□□□□□ -0.29
CCR7-202ENST00000578085 PRG4Q92954 1404 aaPredicted RBP13.22□□□□□ -0.29
CCR7-202ENST00000578085 JPH4Q96JJ6 628 aa13.16□□□□□ -0.3
CCR7-202ENST00000578085 KIF13AQ9H1H9 1805 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms