RNA–Protein interactions for RNA: ENST00000578026.5

GDPD1-202, Transcript of glycerophosphodiester phosphodiesterase domain containing 1, humanhuman

TSL 3

Gene GDPD1, Length 934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD1-202ENST00000578026 NISCHQ9Y2I1 1504 aa42.3■■■■■ 4.36
GDPD1-202ENST00000578026 ABCC9O60706 1549 aa38.67■■■■□ 3.78
GDPD1-202ENST00000578026 CCDC180Q9P1Z9 1646 aa38.11■■■■□ 3.69
GDPD1-202ENST00000578026 DNAJC5BQ9UF47 199 aa36.81■■■■□ 3.48
GDPD1-202ENST00000578026 RB1CC1Q8TDY2 1594 aa36.5■■■■□ 3.43
GDPD1-202ENST00000578026 NACADO15069 1562 aa36.15■■■■□ 3.38
GDPD1-202ENST00000578026 PABPN1Q86U42 306 aaKnown RBP eCLIP35.94■■■■□ 3.34
GDPD1-202ENST00000578026 DCAF8L2P0C7V8 631 aa35.85■■■■□ 3.33
GDPD1-202ENST00000578026 UNC13AQ9UPW8 1703 aa35.75■■■■□ 3.31
GDPD1-202ENST00000578026 BICRAQ9NZM4 1560 aa35.59■■■■□ 3.29
GDPD1-202ENST00000578026 MYO15BQ96JP2 1530 aa35.49■■■■□ 3.27
GDPD1-202ENST00000578026 ZCCHC6Q5VYS8 1495 aaKnown RBP34.96■■■■□ 3.19
GDPD1-202ENST00000578026 SHROOM4Q9ULL8 1493 aa34.91■■■■□ 3.18
GDPD1-202ENST00000578026 CC2D2AQ9P2K1 1620 aa34.89■■■■□ 3.18
GDPD1-202ENST00000578026 DCAF1Q9Y4B6 1507 aa34.86■■■■□ 3.17
GDPD1-202ENST00000578026 CECR2Q9BXF3 1484 aa34.86■■■■□ 3.17
GDPD1-202ENST00000578026 SCRIBQ14160 1630 aa34.76■■■■□ 3.15
GDPD1-202ENST00000578026 EIF4G1Q04637 1599 aaKnown RBP34.7■■■■□ 3.14
GDPD1-202ENST00000578026 DNAJC5Q9H3Z4 198 aa34.05■■■■□ 3.04
GDPD1-202ENST00000578026 CUX2O14529 1486 aa33.46■■■□□ 2.95
GDPD1-202ENST00000578026 NCAPD3P42695 1498 aa33.42■■■□□ 2.94
GDPD1-202ENST00000578026 ERCC6Q03468 1493 aa33.34■■■□□ 2.93
GDPD1-202ENST00000578026 ATAD2BQ9ULI0 1458 aa33.27■■■□□ 2.92
GDPD1-202ENST00000578026 NESP48681 1621 aa33.12■■■□□ 2.89
GDPD1-202ENST00000578026 HMGXB3Q12766 1538 aa33.11■■■□□ 2.89
GDPD1-202ENST00000578026 SMARCA4P51532 1647 aa33.1■■■□□ 2.89
GDPD1-202ENST00000578026 SMARCA2P51531 1590 aa33.08■■■□□ 2.89
GDPD1-202ENST00000578026 BAZ1BQ9UIG0 1483 aaKnown RBP32.87■■■□□ 2.85
GDPD1-202ENST00000578026 THOC2Q8NI27 1593 aaKnown RBP32.85■■■□□ 2.85
GDPD1-202ENST00000578026 BAZ1AQ9NRL2 1556 aaPredicted RBP32.81■■■□□ 2.84
GDPD1-202ENST00000578026 PEG3Q9GZU2 1588 aa32.77■■■□□ 2.84
GDPD1-202ENST00000578026 LAMC3Q9Y6N6 1575 aa32.7■■■□□ 2.82
GDPD1-202ENST00000578026 MROH2BQ7Z745 1585 aa32.63■■■□□ 2.81
GDPD1-202ENST00000578026 KIF21AQ7Z4S6 1674 aa32.62■■■□□ 2.81
GDPD1-202ENST00000578026 PDS5BQ9NTI5 1447 aa32.51■■■□□ 2.79
GDPD1-202ENST00000578026 CADPSQ9ULU8 1353 aa32.37■■■□□ 2.77
GDPD1-202ENST00000578026 TRIM41Q8WV44 630 aa32.34■■■□□ 2.77
GDPD1-202ENST00000578026 MRC2Q9UBG0 1479 aa32.31■■■□□ 2.76
GDPD1-202ENST00000578026 WDR62O43379 1518 aa32.26■■■□□ 2.76
GDPD1-202ENST00000578026 WIZO95785 1651 aa32.18■■■□□ 2.74
GDPD1-202ENST00000578026 CEP164Q9UPV0 1460 aa32.06■■■□□ 2.72
GDPD1-202ENST00000578026 FANCD2Q9BXW9 1451 aa32.01■■■□□ 2.71
GDPD1-202ENST00000578026 CFTRP13569 1480 aa31.91■■■□□ 2.7
GDPD1-202ENST00000578026 OSCARQ8IYS5 282 aa31.84■■■□□ 2.69
GDPD1-202ENST00000578026 URB2Q14146 1524 aaKnown RBP31.83■■■□□ 2.69
GDPD1-202ENST00000578026 RSF1Q96T23 1441 aaPredicted RBP31.75■■■□□ 2.67
GDPD1-202ENST00000578026 TOP2AP11388 1531 aaKnown RBP31.71■■■□□ 2.67
GDPD1-202ENST00000578026 RIMBP3CA6NJZ7 1639 aa31.54■■■□□ 2.64
GDPD1-202ENST00000578026 RIMBP3BA6NNM3 1639 aa31.54■■■□□ 2.64
GDPD1-202ENST00000578026 RIMBP3Q9UFD9 1639 aa31.54■■■□□ 2.64
GDPD1-202ENST00000578026 ZNF608Q9ULD9 1512 aaPredicted RBP31.54■■■□□ 2.64
GDPD1-202ENST00000578026 PRDM2Q13029 1718 aa31.49■■■□□ 2.63
GDPD1-202ENST00000578026 IFT140Q96RY7 1462 aa31.44■■■□□ 2.62
GDPD1-202ENST00000578026 CCDC88BA6NC98 1476 aa31.4■■■□□ 2.62
GDPD1-202ENST00000578026 ARHGEF11O15085 1522 aa31.39■■■□□ 2.62
GDPD1-202ENST00000578026 TOPBP1Q92547 1522 aa31.37■■■□□ 2.61
GDPD1-202ENST00000578026 EIF4G3O43432 1585 aaKnown RBP31.28■■■□□ 2.6
GDPD1-202ENST00000578026 DNMBPQ6XZF7 1577 aa31.18■■■□□ 2.58
GDPD1-202ENST00000578026 CYB5RLQ6IPT4 315 aa31.16■■■□□ 2.58
GDPD1-202ENST00000578026 AQRO60306 1485 aaKnown RBP eCLIP31.15■■■□□ 2.58
GDPD1-202ENST00000578026 ABCC8Q09428 1581 aa31.15■■■□□ 2.58
GDPD1-202ENST00000578026 TARBP1Q13395 1621 aaKnown RBP31.14■■■□□ 2.58
GDPD1-202ENST00000578026 CHD1O14646 1710 aa31.13■■■□□ 2.57
GDPD1-202ENST00000578026 ARAP1Q96P48 1450 aa31.08■■■□□ 2.57
GDPD1-202ENST00000578026 POLA1P09884 1462 aaPredicted RBP31.02■■■□□ 2.56
GDPD1-202ENST00000578026 FBLN2P98095 1184 aa30.97■■■□□ 2.55
GDPD1-202ENST00000578026 RAD54L2Q9Y4B4 1467 aa30.95■■■□□ 2.54
GDPD1-202ENST00000578026 TRHP20396 242 aaPredicted RBP30.92■■■□□ 2.54
GDPD1-202ENST00000578026 TDRD9Q8NDG6 1382 aaKnown RBP30.88■■■□□ 2.53
GDPD1-202ENST00000578026 SOGA1O94964 1423 aa30.83■■■□□ 2.53
GDPD1-202ENST00000578026 SNAPC4Q5SXM2 1469 aa30.8■■■□□ 2.52
GDPD1-202ENST00000578026 CLASP1Q7Z460 1538 aa30.79■■■□□ 2.52
GDPD1-202ENST00000578026 FGD5Q6ZNL6 1462 aa30.75■■■□□ 2.51
GDPD1-202ENST00000578026 CUX1P39880 1505 aa30.68■■■□□ 2.5
GDPD1-202ENST00000578026 WDR97A6NE52 1622 aa30.68■■■□□ 2.5
GDPD1-202ENST00000578026 MAGI1Q96QZ7 1491 aaPredicted RBP30.66■■■□□ 2.5
GDPD1-202ENST00000578026 SYNJ1O43426 1573 aa30.64■■■□□ 2.5
GDPD1-202ENST00000578026 CHMP7Q8WUX9 453 aaPredicted RBP30.64■■■□□ 2.5
GDPD1-202ENST00000578026 GRIN2BQ13224 1484 aa30.61■■■□□ 2.49
GDPD1-202ENST00000578026 SYNJ2O15056 1496 aa30.57■■■□□ 2.48
GDPD1-202ENST00000578026 PBRM1Q86U86 1689 aa30.46■■■□□ 2.47
GDPD1-202ENST00000578026 GAPVD1Q14C86 1478 aa30.46■■■□□ 2.47
GDPD1-202ENST00000578026 ABCA5Q8WWZ7 1642 aa30.37■■■□□ 2.45
GDPD1-202ENST00000578026 ABCA10Q8WWZ4 1543 aa30.36■■■□□ 2.45
GDPD1-202ENST00000578026 ERCC6L2Q5T890 1561 aa30.34■■■□□ 2.45
GDPD1-202ENST00000578026 AEBP2Q6ZN18 517 aaPredicted RBP30.33■■■□□ 2.45
GDPD1-202ENST00000578026 GRIN2AQ12879 1464 aa30.25■■■□□ 2.43
GDPD1-202ENST00000578026 CEP170Q5SW79 1584 aa30.2■■■□□ 2.42
GDPD1-202ENST00000578026 NUP160Q12769 1436 aa30.19■■■□□ 2.42
GDPD1-202ENST00000578026 ADAMTS12P58397 1594 aa30.18■■■□□ 2.42
GDPD1-202ENST00000578026 WRNQ14191 1432 aaPredicted RBP eCLIP30.1■■■□□ 2.41
GDPD1-202ENST00000578026 SHROOM2Q13796 1616 aa30.1■■■□□ 2.41
GDPD1-202ENST00000578026 FHAD1B1AJZ9 1412 aa30.04■■■□□ 2.4
GDPD1-202ENST00000578026 BIVM-ERCC5R4GMW8 1640 aa30■■■□□ 2.39
GDPD1-202ENST00000578026 TOP2BQ02880 1626 aa30■■■□□ 2.39
GDPD1-202ENST00000578026 KIF13AQ9H1H9 1805 aa29.96■■■□□ 2.39
GDPD1-202ENST00000578026 ERICH3Q5RHP9 1530 aa29.94■■■□□ 2.38
GDPD1-202ENST00000578026 SUPT5HO00267 1087 aaKnown RBP29.93■■■□□ 2.38
GDPD1-202ENST00000578026 PRG4Q92954 1404 aaPredicted RBP29.91■■■□□ 2.38
GDPD1-202ENST00000578026 JPH4Q96JJ6 628 aa29.82■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms