RNA–Protein interactions for RNA: ENST00000578018.5

CDK5RAP3-206, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-206ENST00000578018 NISCHQ9Y2I1 1504 aa41.69■■■■■ 4.26
CDK5RAP3-206ENST00000578018 CCDC180Q9P1Z9 1646 aa37.41■■■■□ 3.58
CDK5RAP3-206ENST00000578018 ABCC9O60706 1549 aa37.15■■■■□ 3.54
CDK5RAP3-206ENST00000578018 RB1CC1Q8TDY2 1594 aa35.48■■■■□ 3.27
CDK5RAP3-206ENST00000578018 NACADO15069 1562 aa35.28■■■■□ 3.24
CDK5RAP3-206ENST00000578018 DCAF8L2P0C7V8 631 aa34.95■■■■□ 3.19
CDK5RAP3-206ENST00000578018 MYO15BQ96JP2 1530 aa34.86■■■■□ 3.17
CDK5RAP3-206ENST00000578018 UNC13AQ9UPW8 1703 aa34.74■■■■□ 3.15
CDK5RAP3-206ENST00000578018 DNAJC5BQ9UF47 199 aa34.67■■■■□ 3.14
CDK5RAP3-206ENST00000578018 ZCCHC6Q5VYS8 1495 aaKnown RBP34.62■■■■□ 3.13
CDK5RAP3-206ENST00000578018 PABPN1Q86U42 306 aaKnown RBP eCLIP34.56■■■■□ 3.12
CDK5RAP3-206ENST00000578018 DCAF1Q9Y4B6 1507 aa34.48■■■■□ 3.11
CDK5RAP3-206ENST00000578018 BICRAQ9NZM4 1560 aa34.47■■■■□ 3.11
CDK5RAP3-206ENST00000578018 SCRIBQ14160 1630 aa34.05■■■■□ 3.04
CDK5RAP3-206ENST00000578018 SHROOM4Q9ULL8 1493 aa34.03■■■■□ 3.04
CDK5RAP3-206ENST00000578018 CC2D2AQ9P2K1 1620 aa33.61■■■□□ 2.97
CDK5RAP3-206ENST00000578018 EIF4G1Q04637 1599 aaKnown RBP33.6■■■□□ 2.97
CDK5RAP3-206ENST00000578018 CECR2Q9BXF3 1484 aa33.46■■■□□ 2.95
CDK5RAP3-206ENST00000578018 NCAPD3P42695 1498 aa32.54■■■□□ 2.8
CDK5RAP3-206ENST00000578018 SMARCA4P51532 1647 aa32.51■■■□□ 2.8
CDK5RAP3-206ENST00000578018 ATAD2BQ9ULI0 1458 aa32.47■■■□□ 2.79
CDK5RAP3-206ENST00000578018 SMARCA2P51531 1590 aa32.41■■■□□ 2.78
CDK5RAP3-206ENST00000578018 BAZ1AQ9NRL2 1556 aaPredicted RBP32.36■■■□□ 2.77
CDK5RAP3-206ENST00000578018 HMGXB3Q12766 1538 aa32.36■■■□□ 2.77
CDK5RAP3-206ENST00000578018 PEG3Q9GZU2 1588 aa32.22■■■□□ 2.75
CDK5RAP3-206ENST00000578018 BAZ1BQ9UIG0 1483 aaKnown RBP32.16■■■□□ 2.74
CDK5RAP3-206ENST00000578018 MROH2BQ7Z745 1585 aa32.12■■■□□ 2.73
CDK5RAP3-206ENST00000578018 ERCC6Q03468 1493 aa32.06■■■□□ 2.72
CDK5RAP3-206ENST00000578018 CUX2O14529 1486 aa31.98■■■□□ 2.71
CDK5RAP3-206ENST00000578018 NESP48681 1621 aa31.98■■■□□ 2.71
CDK5RAP3-206ENST00000578018 LAMC3Q9Y6N6 1575 aa31.81■■■□□ 2.68
CDK5RAP3-206ENST00000578018 WIZO95785 1651 aa31.76■■■□□ 2.68
CDK5RAP3-206ENST00000578018 DNAJC5Q9H3Z4 198 aa31.71■■■□□ 2.67
CDK5RAP3-206ENST00000578018 THOC2Q8NI27 1593 aaKnown RBP31.69■■■□□ 2.66
CDK5RAP3-206ENST00000578018 KIF21AQ7Z4S6 1674 aa31.63■■■□□ 2.65
CDK5RAP3-206ENST00000578018 PDS5BQ9NTI5 1447 aa31.58■■■□□ 2.65
CDK5RAP3-206ENST00000578018 CADPSQ9ULU8 1353 aa31.54■■■□□ 2.64
CDK5RAP3-206ENST00000578018 RSF1Q96T23 1441 aaPredicted RBP31.49■■■□□ 2.63
CDK5RAP3-206ENST00000578018 TOP2AP11388 1531 aaKnown RBP31.38■■■□□ 2.61
CDK5RAP3-206ENST00000578018 MRC2Q9UBG0 1479 aa31.33■■■□□ 2.61
CDK5RAP3-206ENST00000578018 WDR62O43379 1518 aa31.28■■■□□ 2.6
CDK5RAP3-206ENST00000578018 CFTRP13569 1480 aa31.24■■■□□ 2.59
CDK5RAP3-206ENST00000578018 CEP164Q9UPV0 1460 aa31.23■■■□□ 2.59
CDK5RAP3-206ENST00000578018 FANCD2Q9BXW9 1451 aa31.21■■■□□ 2.59
CDK5RAP3-206ENST00000578018 PRDM2Q13029 1718 aa31.04■■■□□ 2.56
CDK5RAP3-206ENST00000578018 CCDC88BA6NC98 1476 aa30.98■■■□□ 2.55
CDK5RAP3-206ENST00000578018 URB2Q14146 1524 aaKnown RBP30.95■■■□□ 2.55
CDK5RAP3-206ENST00000578018 TOPBP1Q92547 1522 aa30.64■■■□□ 2.5
CDK5RAP3-206ENST00000578018 IFT140Q96RY7 1462 aa30.59■■■□□ 2.49
CDK5RAP3-206ENST00000578018 DNMBPQ6XZF7 1577 aa30.57■■■□□ 2.48
CDK5RAP3-206ENST00000578018 ABCC8Q09428 1581 aa30.56■■■□□ 2.48
CDK5RAP3-206ENST00000578018 ZNF608Q9ULD9 1512 aaPredicted RBP30.53■■■□□ 2.48
CDK5RAP3-206ENST00000578018 OSCARQ8IYS5 282 aa30.46■■■□□ 2.47
CDK5RAP3-206ENST00000578018 EIF4G3O43432 1585 aaKnown RBP30.42■■■□□ 2.46
CDK5RAP3-206ENST00000578018 TARBP1Q13395 1621 aaKnown RBP30.39■■■□□ 2.46
CDK5RAP3-206ENST00000578018 TRIM41Q8WV44 630 aa30.35■■■□□ 2.45
CDK5RAP3-206ENST00000578018 POLA1P09884 1462 aaPredicted RBP30.34■■■□□ 2.45
CDK5RAP3-206ENST00000578018 AQRO60306 1485 aaKnown RBP eCLIP30.24■■■□□ 2.433e-7■■■■□ 19.4
CDK5RAP3-206ENST00000578018 RAD54L2Q9Y4B4 1467 aa30.2■■■□□ 2.43
CDK5RAP3-206ENST00000578018 CUX1P39880 1505 aa30.18■■■□□ 2.42
CDK5RAP3-206ENST00000578018 FGD5Q6ZNL6 1462 aa30.18■■■□□ 2.42
CDK5RAP3-206ENST00000578018 CHD1O14646 1710 aa30.17■■■□□ 2.42
CDK5RAP3-206ENST00000578018 RIMBP3CA6NJZ7 1639 aa30.15■■■□□ 2.42
CDK5RAP3-206ENST00000578018 RIMBP3BA6NNM3 1639 aa30.15■■■□□ 2.42
CDK5RAP3-206ENST00000578018 RIMBP3Q9UFD9 1639 aa30.15■■■□□ 2.42
CDK5RAP3-206ENST00000578018 SOGA1O94964 1423 aa30.15■■■□□ 2.42
CDK5RAP3-206ENST00000578018 SUPT5HO00267 1087 aaKnown RBP30.12■■■□□ 2.41
CDK5RAP3-206ENST00000578018 WDR97A6NE52 1622 aa30.11■■■□□ 2.41
CDK5RAP3-206ENST00000578018 ARHGEF11O15085 1522 aa30.07■■■□□ 2.4
CDK5RAP3-206ENST00000578018 TDRD9Q8NDG6 1382 aaKnown RBP30.07■■■□□ 2.4
CDK5RAP3-206ENST00000578018 SNAPC4Q5SXM2 1469 aa29.98■■■□□ 2.39
CDK5RAP3-206ENST00000578018 FBLN2P98095 1184 aa29.94■■■□□ 2.38
CDK5RAP3-206ENST00000578018 MAGI1Q96QZ7 1491 aaPredicted RBP29.92■■■□□ 2.38
CDK5RAP3-206ENST00000578018 GRIN2BQ13224 1484 aa29.91■■■□□ 2.38
CDK5RAP3-206ENST00000578018 PBRM1Q86U86 1689 aa29.87■■■□□ 2.37
CDK5RAP3-206ENST00000578018 ABCA10Q8WWZ4 1543 aa29.85■■■□□ 2.37
CDK5RAP3-206ENST00000578018 ABCA5Q8WWZ7 1642 aa29.82■■■□□ 2.36
CDK5RAP3-206ENST00000578018 CLASP1Q7Z460 1538 aa29.82■■■□□ 2.36
CDK5RAP3-206ENST00000578018 GAPVD1Q14C86 1478 aa29.81■■■□□ 2.36
CDK5RAP3-206ENST00000578018 SYNJ2O15056 1496 aa29.8■■■□□ 2.36
CDK5RAP3-206ENST00000578018 SYNJ1O43426 1573 aa29.79■■■□□ 2.36
CDK5RAP3-206ENST00000578018 ARAP1Q96P48 1450 aa29.79■■■□□ 2.36
CDK5RAP3-206ENST00000578018 BIVM-ERCC5R4GMW8 1640 aa29.78■■■□□ 2.36
CDK5RAP3-206ENST00000578018 TOP2BQ02880 1626 aa29.76■■■□□ 2.35
CDK5RAP3-206ENST00000578018 CHMP7Q8WUX9 453 aaPredicted RBP29.76■■■□□ 2.35
CDK5RAP3-206ENST00000578018 CYB5RLQ6IPT4 315 aa29.73■■■□□ 2.35
CDK5RAP3-206ENST00000578018 WRNQ14191 1432 aaPredicted RBP eCLIP29.71■■■□□ 2.35
CDK5RAP3-206ENST00000578018 ADAMTS12P58397 1594 aa29.59■■■□□ 2.33
CDK5RAP3-206ENST00000578018 GRIN2AQ12879 1464 aa29.54■■■□□ 2.32
CDK5RAP3-206ENST00000578018 ERICH3Q5RHP9 1530 aa29.48■■■□□ 2.31
CDK5RAP3-206ENST00000578018 CEP170Q5SW79 1584 aa29.45■■■□□ 2.31
CDK5RAP3-206ENST00000578018 FHAD1B1AJZ9 1412 aa29.45■■■□□ 2.3
CDK5RAP3-206ENST00000578018 NUP160Q12769 1436 aa29.44■■■□□ 2.3
CDK5RAP3-206ENST00000578018 ERCC6L2Q5T890 1561 aa29.35■■■□□ 2.29
CDK5RAP3-206ENST00000578018 SHROOM2Q13796 1616 aa29.34■■■□□ 2.29
CDK5RAP3-206ENST00000578018 TRHP20396 242 aaPredicted RBP29.33■■■□□ 2.29
CDK5RAP3-206ENST00000578018 RUSC2Q8N2Y8 1516 aa29.18■■■□□ 2.26
CDK5RAP3-206ENST00000578018 KIF27Q86VH2 1401 aa29.12■■■□□ 2.25
CDK5RAP3-206ENST00000578018 CUL7Q14999 1698 aa29.11■■■□□ 2.25
CDK5RAP3-206ENST00000578018 PRG4Q92954 1404 aaPredicted RBP29.11■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms