RNA–Protein interactions for RNA: ENST00000578016.1

CYB561-208, Transcript of cytochrome b561, humanhuman

TSL 4

Gene CYB561, Length 530 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561-208ENST00000578016 NISCHQ9Y2I1 1504 aa47.26■■■■■ 5.16
CYB561-208ENST00000578016 CCDC180Q9P1Z9 1646 aa41.98■■■■■ 4.31
CYB561-208ENST00000578016 ABCC9O60706 1549 aa41.23■■■■■ 4.19
CYB561-208ENST00000578016 DCAF8L2P0C7V8 631 aa39.74■■■■□ 3.95
CYB561-208ENST00000578016 RB1CC1Q8TDY2 1594 aa39.59■■■■□ 3.93
CYB561-208ENST00000578016 NACADO15069 1562 aa39.5■■■■□ 3.91
CYB561-208ENST00000578016 ZCCHC6Q5VYS8 1495 aaKnown RBP39.33■■■■□ 3.89
CYB561-208ENST00000578016 MYO15BQ96JP2 1530 aa39.18■■■■□ 3.86
CYB561-208ENST00000578016 DCAF1Q9Y4B6 1507 aa39.03■■■■□ 3.84
CYB561-208ENST00000578016 UNC13AQ9UPW8 1703 aa38.67■■■■□ 3.78
CYB561-208ENST00000578016 PABPN1Q86U42 306 aaKnown RBP eCLIP38.59■■■■□ 3.77
CYB561-208ENST00000578016 SCRIBQ14160 1630 aa38.41■■■■□ 3.74
CYB561-208ENST00000578016 BICRAQ9NZM4 1560 aa38.35■■■■□ 3.73
CYB561-208ENST00000578016 SHROOM4Q9ULL8 1493 aa37.88■■■■□ 3.65
CYB561-208ENST00000578016 DNAJC5BQ9UF47 199 aa37.87■■■■□ 3.65
CYB561-208ENST00000578016 EIF4G1Q04637 1599 aaKnown RBP37.37■■■■□ 3.57
CYB561-208ENST00000578016 CC2D2AQ9P2K1 1620 aa37.25■■■■□ 3.55
CYB561-208ENST00000578016 CECR2Q9BXF3 1484 aa37.02■■■■□ 3.52
CYB561-208ENST00000578016 SMARCA4P51532 1647 aa36.68■■■■□ 3.46
CYB561-208ENST00000578016 BAZ1AQ9NRL2 1556 aaPredicted RBP36.63■■■■□ 3.45
CYB561-208ENST00000578016 ATAD2BQ9ULI0 1458 aa36.5■■■■□ 3.43
CYB561-208ENST00000578016 NCAPD3P42695 1498 aa36.45■■■■□ 3.43
CYB561-208ENST00000578016 SMARCA2P51531 1590 aa36.44■■■■□ 3.42
CYB561-208ENST00000578016 MROH2BQ7Z745 1585 aa36.44■■■■□ 3.42
CYB561-208ENST00000578016 HMGXB3Q12766 1538 aa36.25■■■■□ 3.39
CYB561-208ENST00000578016 PEG3Q9GZU2 1588 aa36.25■■■■□ 3.39
CYB561-208ENST00000578016 BAZ1BQ9UIG0 1483 aaKnown RBP36.23■■■■□ 3.39
CYB561-208ENST00000578016 WIZO95785 1651 aa36.07■■■■□ 3.37
CYB561-208ENST00000578016 RSF1Q96T23 1441 aaPredicted RBP36.02■■■■□ 3.36
CYB561-208ENST00000578016 DNAJC5Q9H3Z4 198 aa35.95■■■■□ 3.35
CYB561-208ENST00000578016 NESP48681 1621 aa35.65■■■■□ 3.3
CYB561-208ENST00000578016 TOP2AP11388 1531 aaKnown RBP35.65■■■■□ 3.3
CYB561-208ENST00000578016 ERCC6Q03468 1493 aa35.56■■■■□ 3.28
CYB561-208ENST00000578016 LAMC3Q9Y6N6 1575 aa35.5■■■■□ 3.27
CYB561-208ENST00000578016 CADPSQ9ULU8 1353 aa35.43■■■■□ 3.26
CYB561-208ENST00000578016 PDS5BQ9NTI5 1447 aa35.32■■■■□ 3.24
CYB561-208ENST00000578016 SUPT5HO00267 1087 aaKnown RBP35.27■■■■□ 3.24
CYB561-208ENST00000578016 CCDC88BA6NC98 1476 aa35.27■■■■□ 3.24
CYB561-208ENST00000578016 KIF21AQ7Z4S6 1674 aa35.21■■■■□ 3.23
CYB561-208ENST00000578016 CFTRP13569 1480 aa35.17■■■■□ 3.22
CYB561-208ENST00000578016 CUX2O14529 1486 aa35.09■■■■□ 3.21
CYB561-208ENST00000578016 THOC2Q8NI27 1593 aaKnown RBP35.04■■■■□ 3.2
CYB561-208ENST00000578016 FANCD2Q9BXW9 1451 aa35.03■■■■□ 3.2
CYB561-208ENST00000578016 CEP164Q9UPV0 1460 aa34.99■■■■□ 3.19
CYB561-208ENST00000578016 MRC2Q9UBG0 1479 aa34.94■■■■□ 3.18
CYB561-208ENST00000578016 PRDM2Q13029 1718 aa34.9■■■■□ 3.18
CYB561-208ENST00000578016 WDR62O43379 1518 aa34.77■■■■□ 3.16
CYB561-208ENST00000578016 URB2Q14146 1524 aaKnown RBP34.67■■■■□ 3.14
CYB561-208ENST00000578016 TOPBP1Q92547 1522 aa34.46■■■■□ 3.11
CYB561-208ENST00000578016 ABCC8Q09428 1581 aa34.45■■■■□ 3.1
CYB561-208ENST00000578016 DNMBPQ6XZF7 1577 aa34.4■■■■□ 3.1
CYB561-208ENST00000578016 IFT140Q96RY7 1462 aa34.25■■■■□ 3.07
CYB561-208ENST00000578016 CUX1P39880 1505 aa34.2■■■■□ 3.06
CYB561-208ENST00000578016 POLA1P09884 1462 aaPredicted RBP34.15■■■■□ 3.06
CYB561-208ENST00000578016 ZNF608Q9ULD9 1512 aaPredicted RBP34.11■■■■□ 3.05
CYB561-208ENST00000578016 FGD5Q6ZNL6 1462 aa34.1■■■■□ 3.05
CYB561-208ENST00000578016 SOGA1O94964 1423 aa34.07■■■■□ 3.04
CYB561-208ENST00000578016 RAD54L2Q9Y4B4 1467 aa34.07■■■■□ 3.04
CYB561-208ENST00000578016 TARBP1Q13395 1621 aaKnown RBP34.05■■■■□ 3.04
CYB561-208ENST00000578016 WRNQ14191 1432 aaPredicted RBP eCLIP33.99■■■■□ 3.03
CYB561-208ENST00000578016 AQRO60306 1485 aaKnown RBP eCLIP33.95■■■■□ 3.031e-16■■■■■ 56.9
CYB561-208ENST00000578016 EIF4G3O43432 1585 aaKnown RBP33.94■■■■□ 3.02
CYB561-208ENST00000578016 TDRD9Q8NDG6 1382 aaKnown RBP33.9■■■■□ 3.02
CYB561-208ENST00000578016 SYNJ1O43426 1573 aa33.88■■■■□ 3.01
CYB561-208ENST00000578016 TOP2BQ02880 1626 aa33.87■■■■□ 3.01
CYB561-208ENST00000578016 BIVM-ERCC5R4GMW8 1640 aa33.86■■■■□ 3.01
CYB561-208ENST00000578016 OSCARQ8IYS5 282 aa33.75■■■□□ 2.99
CYB561-208ENST00000578016 WDR97A6NE52 1622 aa33.74■■■□□ 2.99
CYB561-208ENST00000578016 ABCA10Q8WWZ4 1543 aa33.73■■■□□ 2.99
CYB561-208ENST00000578016 FBLN2P98095 1184 aa33.66■■■□□ 2.98
CYB561-208ENST00000578016 GAPVD1Q14C86 1478 aa33.66■■■□□ 2.98
CYB561-208ENST00000578016 GRIN2BQ13224 1484 aa33.64■■■□□ 2.98
CYB561-208ENST00000578016 SNAPC4Q5SXM2 1469 aa33.62■■■□□ 2.97
CYB561-208ENST00000578016 ABCA5Q8WWZ7 1642 aa33.57■■■□□ 2.97
CYB561-208ENST00000578016 TRIM41Q8WV44 630 aa33.57■■■□□ 2.96
CYB561-208ENST00000578016 PBRM1Q86U86 1689 aa33.56■■■□□ 2.96
CYB561-208ENST00000578016 CHD1O14646 1710 aa33.56■■■□□ 2.96
CYB561-208ENST00000578016 MAGI1Q96QZ7 1491 aaPredicted RBP33.53■■■□□ 2.96
CYB561-208ENST00000578016 CHMP7Q8WUX9 453 aaPredicted RBP33.51■■■□□ 2.95
CYB561-208ENST00000578016 SYNJ2O15056 1496 aa33.41■■■□□ 2.94
CYB561-208ENST00000578016 ERICH3Q5RHP9 1530 aa33.32■■■□□ 2.92
CYB561-208ENST00000578016 KIF27Q86VH2 1401 aa33.28■■■□□ 2.92
CYB561-208ENST00000578016 ADAMTS12P58397 1594 aa33.28■■■□□ 2.92
CYB561-208ENST00000578016 FHAD1B1AJZ9 1412 aa33.26■■■□□ 2.91
CYB561-208ENST00000578016 GRIN2AQ12879 1464 aa33.19■■■□□ 2.9
CYB561-208ENST00000578016 IGF1RP08069 1367 aa33.15■■■□□ 2.9
CYB561-208ENST00000578016 RIMBP3CA6NJZ7 1639 aa33.14■■■□□ 2.9
CYB561-208ENST00000578016 RIMBP3BA6NNM3 1639 aa33.14■■■□□ 2.9
CYB561-208ENST00000578016 RIMBP3Q9UFD9 1639 aa33.14■■■□□ 2.9
CYB561-208ENST00000578016 CLASP1Q7Z460 1538 aa33.13■■■□□ 2.89
CYB561-208ENST00000578016 ARHGEF11O15085 1522 aa33.12■■■□□ 2.89
CYB561-208ENST00000578016 NUP160Q12769 1436 aa33.02■■■□□ 2.88
CYB561-208ENST00000578016 CUL7Q14999 1698 aa33.02■■■□□ 2.88
CYB561-208ENST00000578016 CEP170Q5SW79 1584 aa33.02■■■□□ 2.88
CYB561-208ENST00000578016 RUSC2Q8N2Y8 1516 aa33■■■□□ 2.87
CYB561-208ENST00000578016 CARMIL1Q5VZK9 1371 aa32.98■■■□□ 2.87
CYB561-208ENST00000578016 CYB5RLQ6IPT4 315 aa32.93■■■□□ 2.86
CYB561-208ENST00000578016 ARAP1Q96P48 1450 aa32.86■■■□□ 2.85
CYB561-208ENST00000578016 CHIC1Q5VXU3 224 aa32.82■■■□□ 2.84
CYB561-208ENST00000578016 JPH4Q96JJ6 628 aa32.79■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms