RNA–Protein interactions for RNA: ENST00000578006.5

RHBDL3-205, Transcript of rhomboid like 3, humanhuman

TSL 1 (best)

Gene RHBDL3, Length 1,341 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3-205ENST00000578006 NISCHQ9Y2I1 1504 aa49.91■■■■■ 5.58
RHBDL3-205ENST00000578006 CCDC180Q9P1Z9 1646 aa44.59■■■■■ 4.73
RHBDL3-205ENST00000578006 ABCC9O60706 1549 aa43.66■■■■■ 4.58
RHBDL3-205ENST00000578006 RB1CC1Q8TDY2 1594 aa42.02■■■■■ 4.32
RHBDL3-205ENST00000578006 NACADO15069 1562 aa41.92■■■■■ 4.3
RHBDL3-205ENST00000578006 DCAF8L2P0C7V8 631 aa41.64■■■■■ 4.26
RHBDL3-205ENST00000578006 MYO15BQ96JP2 1530 aa41.63■■■■■ 4.25
RHBDL3-205ENST00000578006 ZCCHC6Q5VYS8 1495 aaKnown RBP41.56■■■■■ 4.24
RHBDL3-205ENST00000578006 DCAF1Q9Y4B6 1507 aa41.35■■■■■ 4.21
RHBDL3-205ENST00000578006 UNC13AQ9UPW8 1703 aa41.1■■■■■ 4.17
RHBDL3-205ENST00000578006 BICRAQ9NZM4 1560 aa40.7■■■■■ 4.11
RHBDL3-205ENST00000578006 PABPN1Q86U42 306 aaKnown RBP eCLIP40.68■■■■■ 4.1
RHBDL3-205ENST00000578006 SCRIBQ14160 1630 aa40.56■■■■■ 4.08
RHBDL3-205ENST00000578006 SHROOM4Q9ULL8 1493 aa40.37■■■■■ 4.05
RHBDL3-205ENST00000578006 DNAJC5BQ9UF47 199 aa40.17■■■■■ 4.02
RHBDL3-205ENST00000578006 EIF4G1Q04637 1599 aaKnown RBP39.67■■■■□ 3.94
RHBDL3-205ENST00000578006 CC2D2AQ9P2K1 1620 aa39.55■■■■□ 3.92
RHBDL3-205ENST00000578006 CECR2Q9BXF3 1484 aa39.29■■■■□ 3.88
RHBDL3-205ENST00000578006 SMARCA4P51532 1647 aa38.81■■■■□ 3.8
RHBDL3-205ENST00000578006 BAZ1AQ9NRL2 1556 aaPredicted RBP38.74■■■■□ 3.79
RHBDL3-205ENST00000578006 NCAPD3P42695 1498 aa38.63■■■■□ 3.77
RHBDL3-205ENST00000578006 SMARCA2P51531 1590 aa38.61■■■■□ 3.77
RHBDL3-205ENST00000578006 ATAD2BQ9ULI0 1458 aa38.6■■■■□ 3.77
RHBDL3-205ENST00000578006 HMGXB3Q12766 1538 aa38.48■■■■□ 3.75
RHBDL3-205ENST00000578006 PEG3Q9GZU2 1588 aa38.47■■■■□ 3.75
RHBDL3-205ENST00000578006 MROH2BQ7Z745 1585 aa38.43■■■■□ 3.74
RHBDL3-205ENST00000578006 BAZ1BQ9UIG0 1483 aaKnown RBP38.3■■■■□ 3.72
RHBDL3-205ENST00000578006 WIZO95785 1651 aa38.03■■■■□ 3.68
RHBDL3-205ENST00000578006 RSF1Q96T23 1441 aaPredicted RBP37.89■■■■□ 3.66
RHBDL3-205ENST00000578006 NESP48681 1621 aa37.71■■■■□ 3.63
RHBDL3-205ENST00000578006 LAMC3Q9Y6N6 1575 aa37.7■■■■□ 3.63
RHBDL3-205ENST00000578006 ERCC6Q03468 1493 aa37.7■■■■□ 3.63
RHBDL3-205ENST00000578006 TOP2AP11388 1531 aaKnown RBP37.65■■■■□ 3.62
RHBDL3-205ENST00000578006 CADPSQ9ULU8 1353 aa37.47■■■■□ 3.59
RHBDL3-205ENST00000578006 CUX2O14529 1486 aa37.43■■■■□ 3.58
RHBDL3-205ENST00000578006 PDS5BQ9NTI5 1447 aa37.41■■■■□ 3.58
RHBDL3-205ENST00000578006 KIF21AQ7Z4S6 1674 aa37.37■■■■□ 3.57
RHBDL3-205ENST00000578006 THOC2Q8NI27 1593 aaKnown RBP37.3■■■■□ 3.56
RHBDL3-205ENST00000578006 CFTRP13569 1480 aa37.22■■■■□ 3.55
RHBDL3-205ENST00000578006 CCDC88BA6NC98 1476 aa37.14■■■■□ 3.54
RHBDL3-205ENST00000578006 PRDM2Q13029 1718 aa37.08■■■■□ 3.53
RHBDL3-205ENST00000578006 CEP164Q9UPV0 1460 aa37.06■■■■□ 3.52
RHBDL3-205ENST00000578006 FANCD2Q9BXW9 1451 aa37.05■■■■□ 3.52
RHBDL3-205ENST00000578006 MRC2Q9UBG0 1479 aa37.05■■■■□ 3.52
RHBDL3-205ENST00000578006 WDR62O43379 1518 aa36.96■■■■□ 3.51
RHBDL3-205ENST00000578006 URB2Q14146 1524 aaKnown RBP36.69■■■■□ 3.46
RHBDL3-205ENST00000578006 SUPT5HO00267 1087 aaKnown RBP36.68■■■■□ 3.46
RHBDL3-205ENST00000578006 ABCC8Q09428 1581 aa36.48■■■■□ 3.43
RHBDL3-205ENST00000578006 TOPBP1Q92547 1522 aa36.44■■■■□ 3.42
RHBDL3-205ENST00000578006 DNMBPQ6XZF7 1577 aa36.42■■■■□ 3.42
RHBDL3-205ENST00000578006 DNAJC5Q9H3Z4 198 aa36.42■■■■□ 3.42
RHBDL3-205ENST00000578006 IFT140Q96RY7 1462 aa36.28■■■■□ 3.4
RHBDL3-205ENST00000578006 POLA1P09884 1462 aaPredicted RBP36.12■■■■□ 3.37
RHBDL3-205ENST00000578006 TARBP1Q13395 1621 aaKnown RBP36.09■■■■□ 3.37
RHBDL3-205ENST00000578006 CUX1P39880 1505 aa36.07■■■■□ 3.37
RHBDL3-205ENST00000578006 ZNF608Q9ULD9 1512 aaPredicted RBP36.07■■■■□ 3.37
RHBDL3-205ENST00000578006 EIF4G3O43432 1585 aaKnown RBP36.02■■■■□ 3.36
RHBDL3-205ENST00000578006 FGD5Q6ZNL6 1462 aa36■■■■□ 3.35
RHBDL3-205ENST00000578006 SOGA1O94964 1423 aa35.94■■■■□ 3.34
RHBDL3-205ENST00000578006 RAD54L2Q9Y4B4 1467 aa35.92■■■■□ 3.34
RHBDL3-205ENST00000578006 WDR97A6NE52 1622 aa35.89■■■■□ 3.34
RHBDL3-205ENST00000578006 AQRO60306 1485 aaKnown RBP eCLIP35.84■■■■□ 3.33
RHBDL3-205ENST00000578006 BIVM-ERCC5R4GMW8 1640 aa35.79■■■■□ 3.32
RHBDL3-205ENST00000578006 WRNQ14191 1432 aaPredicted RBP eCLIP35.76■■■■□ 3.32
RHBDL3-205ENST00000578006 TOP2BQ02880 1626 aa35.76■■■■□ 3.32
RHBDL3-205ENST00000578006 OSCARQ8IYS5 282 aa35.74■■■■□ 3.31
RHBDL3-205ENST00000578006 TDRD9Q8NDG6 1382 aaKnown RBP35.72■■■■□ 3.31
RHBDL3-205ENST00000578006 SYNJ1O43426 1573 aa35.7■■■■□ 3.31
RHBDL3-205ENST00000578006 ABCA10Q8WWZ4 1543 aa35.66■■■■□ 3.3
RHBDL3-205ENST00000578006 CHD1O14646 1710 aa35.62■■■■□ 3.29
RHBDL3-205ENST00000578006 GRIN2BQ13224 1484 aa35.58■■■■□ 3.29
RHBDL3-205ENST00000578006 PBRM1Q86U86 1689 aa35.57■■■■□ 3.28
RHBDL3-205ENST00000578006 ABCA5Q8WWZ7 1642 aa35.57■■■■□ 3.28
RHBDL3-205ENST00000578006 SNAPC4Q5SXM2 1469 aa35.55■■■■□ 3.28
RHBDL3-205ENST00000578006 GAPVD1Q14C86 1478 aa35.54■■■■□ 3.28
RHBDL3-205ENST00000578006 MAGI1Q96QZ7 1491 aaPredicted RBP35.54■■■■□ 3.28
RHBDL3-205ENST00000578006 FBLN2P98095 1184 aa35.41■■■■□ 3.26
RHBDL3-205ENST00000578006 SYNJ2O15056 1496 aa35.38■■■■□ 3.25
RHBDL3-205ENST00000578006 CHMP7Q8WUX9 453 aaPredicted RBP35.32■■■■□ 3.25
RHBDL3-205ENST00000578006 RIMBP3CA6NJZ7 1639 aa35.27■■■■□ 3.24
RHBDL3-205ENST00000578006 RIMBP3BA6NNM3 1639 aa35.27■■■■□ 3.24
RHBDL3-205ENST00000578006 RIMBP3Q9UFD9 1639 aa35.27■■■■□ 3.24
RHBDL3-205ENST00000578006 ERICH3Q5RHP9 1530 aa35.25■■■■□ 3.23
RHBDL3-205ENST00000578006 ADAMTS12P58397 1594 aa35.24■■■■□ 3.23
RHBDL3-205ENST00000578006 ARHGEF11O15085 1522 aa35.22■■■■□ 3.23
RHBDL3-205ENST00000578006 CLASP1Q7Z460 1538 aa35.21■■■■□ 3.23
RHBDL3-205ENST00000578006 FHAD1B1AJZ9 1412 aa35.14■■■■□ 3.22
RHBDL3-205ENST00000578006 GRIN2AQ12879 1464 aa35.13■■■■□ 3.21
RHBDL3-205ENST00000578006 TRIM41Q8WV44 630 aa35.09■■■■□ 3.21
RHBDL3-205ENST00000578006 KIF27Q86VH2 1401 aa35.05■■■■□ 3.2
RHBDL3-205ENST00000578006 NUP160Q12769 1436 aa34.98■■■■□ 3.19
RHBDL3-205ENST00000578006 CEP170Q5SW79 1584 aa34.96■■■■□ 3.19
RHBDL3-205ENST00000578006 CUL7Q14999 1698 aa34.94■■■■□ 3.18
RHBDL3-205ENST00000578006 ARAP1Q96P48 1450 aa34.91■■■■□ 3.18
RHBDL3-205ENST00000578006 IGF1RP08069 1367 aa34.87■■■■□ 3.17
RHBDL3-205ENST00000578006 CYB5RLQ6IPT4 315 aa34.81■■■■□ 3.16
RHBDL3-205ENST00000578006 SHROOM2Q13796 1616 aa34.79■■■■□ 3.16
RHBDL3-205ENST00000578006 RUSC2Q8N2Y8 1516 aa34.73■■■■□ 3.15
RHBDL3-205ENST00000578006 CARMIL1Q5VZK9 1371 aa34.68■■■■□ 3.14
RHBDL3-205ENST00000578006 ERCC6L2Q5T890 1561 aa34.64■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms