RNA–Protein interactions for RNA: ENST00000577989.5

CYB561-207, Transcript of cytochrome b561, humanhuman

TSL 4

Gene CYB561, Length 542 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561-207ENST00000577989 NISCHQ9Y2I1 1504 aa54.23■■■■■ 6.27
CYB561-207ENST00000577989 ABCC9O60706 1549 aa49.75■■■■■ 5.56
CYB561-207ENST00000577989 CCDC180Q9P1Z9 1646 aa49.03■■■■■ 5.44
CYB561-207ENST00000577989 DNAJC5BQ9UF47 199 aa47.23■■■■■ 5.15
CYB561-207ENST00000577989 RB1CC1Q8TDY2 1594 aa47.05■■■■■ 5.12
CYB561-207ENST00000577989 NACADO15069 1562 aa46.52■■■■■ 5.04
CYB561-207ENST00000577989 DCAF8L2P0C7V8 631 aa46.2■■■■■ 4.99
CYB561-207ENST00000577989 PABPN1Q86U42 306 aaKnown RBP eCLIP46.19■■■■■ 4.98
CYB561-207ENST00000577989 UNC13AQ9UPW8 1703 aa45.95■■■■■ 4.95
CYB561-207ENST00000577989 BICRAQ9NZM4 1560 aa45.62■■■■■ 4.89
CYB561-207ENST00000577989 MYO15BQ96JP2 1530 aa45.58■■■■■ 4.89
CYB561-207ENST00000577989 SHROOM4Q9ULL8 1493 aa44.99■■■■■ 4.79
CYB561-207ENST00000577989 CC2D2AQ9P2K1 1620 aa44.9■■■■■ 4.78
CYB561-207ENST00000577989 CECR2Q9BXF3 1484 aa44.9■■■■■ 4.78
CYB561-207ENST00000577989 ZCCHC6Q5VYS8 1495 aaKnown RBP44.78■■■■■ 4.76
CYB561-207ENST00000577989 DCAF1Q9Y4B6 1507 aa44.74■■■■■ 4.75
CYB561-207ENST00000577989 SCRIBQ14160 1630 aa44.65■■■■■ 4.74
CYB561-207ENST00000577989 EIF4G1Q04637 1599 aaKnown RBP44.62■■■■■ 4.73
CYB561-207ENST00000577989 DNAJC5Q9H3Z4 198 aa43.97■■■■■ 4.63
CYB561-207ENST00000577989 CUX2O14529 1486 aa43.19■■■■■ 4.51
CYB561-207ENST00000577989 ERCC6Q03468 1493 aa43.08■■■■■ 4.49
CYB561-207ENST00000577989 NCAPD3P42695 1498 aa42.92■■■■■ 4.46
CYB561-207ENST00000577989 ATAD2BQ9ULI0 1458 aa42.69■■■■■ 4.42
CYB561-207ENST00000577989 SMARCA2P51531 1590 aa42.58■■■■■ 4.41
CYB561-207ENST00000577989 HMGXB3Q12766 1538 aa42.56■■■■■ 4.4
CYB561-207ENST00000577989 NESP48681 1621 aa42.5■■■■■ 4.39
CYB561-207ENST00000577989 SMARCA4P51532 1647 aa42.49■■■■■ 4.39
CYB561-207ENST00000577989 BAZ1BQ9UIG0 1483 aaKnown RBP42.3■■■■■ 4.36
CYB561-207ENST00000577989 THOC2Q8NI27 1593 aaKnown RBP42.23■■■■■ 4.35
CYB561-207ENST00000577989 BAZ1AQ9NRL2 1556 aaPredicted RBP42.18■■■■■ 4.34
CYB561-207ENST00000577989 LAMC3Q9Y6N6 1575 aa42.13■■■■■ 4.33
CYB561-207ENST00000577989 PEG3Q9GZU2 1588 aa42.05■■■■■ 4.32
CYB561-207ENST00000577989 KIF21AQ7Z4S6 1674 aa41.97■■■■■ 4.31
CYB561-207ENST00000577989 PDS5BQ9NTI5 1447 aa41.92■■■■■ 4.3
CYB561-207ENST00000577989 TRIM41Q8WV44 630 aa41.84■■■■■ 4.29
CYB561-207ENST00000577989 MROH2BQ7Z745 1585 aa41.76■■■■■ 4.28
CYB561-207ENST00000577989 CADPSQ9ULU8 1353 aa41.6■■■■■ 4.25
CYB561-207ENST00000577989 MRC2Q9UBG0 1479 aa41.6■■■■■ 4.25
CYB561-207ENST00000577989 WDR62O43379 1518 aa41.49■■■■■ 4.23
CYB561-207ENST00000577989 CEP164Q9UPV0 1460 aa41.3■■■■■ 4.2
CYB561-207ENST00000577989 WIZO95785 1651 aa41.26■■■■■ 4.2
CYB561-207ENST00000577989 FANCD2Q9BXW9 1451 aa41.15■■■■■ 4.18
CYB561-207ENST00000577989 OSCARQ8IYS5 282 aa41.1■■■■■ 4.17
CYB561-207ENST00000577989 CFTRP13569 1480 aa40.96■■■■■ 4.15
CYB561-207ENST00000577989 URB2Q14146 1524 aaKnown RBP40.83■■■■■ 4.13
CYB561-207ENST00000577989 TOP2AP11388 1531 aaKnown RBP40.69■■■■■ 4.1
CYB561-207ENST00000577989 RIMBP3CA6NJZ7 1639 aa40.65■■■■■ 4.1
CYB561-207ENST00000577989 RIMBP3BA6NNM3 1639 aa40.65■■■■■ 4.1
CYB561-207ENST00000577989 RIMBP3Q9UFD9 1639 aa40.65■■■■■ 4.1
CYB561-207ENST00000577989 RSF1Q96T23 1441 aaPredicted RBP40.62■■■■■ 4.09
CYB561-207ENST00000577989 PRDM2Q13029 1718 aa40.56■■■■■ 4.08
CYB561-207ENST00000577989 IFT140Q96RY7 1462 aa40.47■■■■■ 4.07
CYB561-207ENST00000577989 ZNF608Q9ULD9 1512 aaPredicted RBP40.45■■■■■ 4.07
CYB561-207ENST00000577989 ARHGEF11O15085 1522 aa40.44■■■■■ 4.06
CYB561-207ENST00000577989 TOPBP1Q92547 1522 aa40.27■■■■■ 4.04
CYB561-207ENST00000577989 EIF4G3O43432 1585 aaKnown RBP40.23■■■■■ 4.03
CYB561-207ENST00000577989 CCDC88BA6NC98 1476 aa40.21■■■■■ 4.03
CYB561-207ENST00000577989 CYB5RLQ6IPT4 315 aa40.2■■■■■ 4.03
CYB561-207ENST00000577989 ABCC8Q09428 1581 aa40.18■■■■■ 4.02
CYB561-207ENST00000577989 CHD1O14646 1710 aa40.09■■■■■ 4.01
CYB561-207ENST00000577989 DNMBPQ6XZF7 1577 aa40.09■■■■■ 4.01
CYB561-207ENST00000577989 TRHP20396 242 aaPredicted RBP40.07■■■■■ 4.01
CYB561-207ENST00000577989 AQRO60306 1485 aaKnown RBP eCLIP40■■■■□ 3.993e-7■■■■■ 51.1
CYB561-207ENST00000577989 ARAP1Q96P48 1450 aa39.97■■■■□ 3.99
CYB561-207ENST00000577989 FBLN2P98095 1184 aa39.97■■■■□ 3.99
CYB561-207ENST00000577989 TARBP1Q13395 1621 aaKnown RBP39.96■■■■□ 3.99
CYB561-207ENST00000577989 POLA1P09884 1462 aaPredicted RBP39.81■■■■□ 3.96
CYB561-207ENST00000577989 RAD54L2Q9Y4B4 1467 aa39.68■■■■□ 3.94
CYB561-207ENST00000577989 TDRD9Q8NDG6 1382 aaKnown RBP39.65■■■■□ 3.94
CYB561-207ENST00000577989 SOGA1O94964 1423 aa39.64■■■■□ 3.94
CYB561-207ENST00000577989 SNAPC4Q5SXM2 1469 aa39.61■■■■□ 3.93
CYB561-207ENST00000577989 CLASP1Q7Z460 1538 aa39.56■■■■□ 3.92
CYB561-207ENST00000577989 WDR97A6NE52 1622 aa39.54■■■■□ 3.92
CYB561-207ENST00000577989 CHMP7Q8WUX9 453 aaPredicted RBP39.54■■■■□ 3.92
CYB561-207ENST00000577989 SYNJ1O43426 1573 aa39.54■■■■□ 3.92
CYB561-207ENST00000577989 AEBP2Q6ZN18 517 aaPredicted RBP39.48■■■■□ 3.91
CYB561-207ENST00000577989 FGD5Q6ZNL6 1462 aa39.48■■■■□ 3.91
CYB561-207ENST00000577989 MAGI1Q96QZ7 1491 aaPredicted RBP39.47■■■■□ 3.91
CYB561-207ENST00000577989 GRIN2BQ13224 1484 aa39.39■■■■□ 3.9
CYB561-207ENST00000577989 SYNJ2O15056 1496 aa39.35■■■■□ 3.89
CYB561-207ENST00000577989 CUX1P39880 1505 aa39.3■■■■□ 3.88
CYB561-207ENST00000577989 GAPVD1Q14C86 1478 aa39.23■■■■□ 3.87
CYB561-207ENST00000577989 PBRM1Q86U86 1689 aa39.21■■■■□ 3.87
CYB561-207ENST00000577989 ABCA5Q8WWZ7 1642 aa38.98■■■■□ 3.83
CYB561-207ENST00000577989 ABCA10Q8WWZ4 1543 aa38.96■■■■□ 3.83
CYB561-207ENST00000577989 ERCC6L2Q5T890 1561 aa38.88■■■■□ 3.81
CYB561-207ENST00000577989 GRIN2AQ12879 1464 aa38.88■■■■□ 3.81
CYB561-207ENST00000577989 CEP170Q5SW79 1584 aa38.79■■■■□ 3.8
CYB561-207ENST00000577989 ADAMTS12P58397 1594 aa38.77■■■■□ 3.8
CYB561-207ENST00000577989 NUP160Q12769 1436 aa38.74■■■■□ 3.79
CYB561-207ENST00000577989 WRNQ14191 1432 aaPredicted RBP eCLIP38.7■■■■□ 3.799e-6■■■■■ 50.1
CYB561-207ENST00000577989 SHROOM2Q13796 1616 aa38.66■■■■□ 3.78
CYB561-207ENST00000577989 FHAD1B1AJZ9 1412 aa38.62■■■■□ 3.77
CYB561-207ENST00000577989 KIF13AQ9H1H9 1805 aa38.59■■■■□ 3.77
CYB561-207ENST00000577989 BIVM-ERCC5R4GMW8 1640 aa38.49■■■■□ 3.75
CYB561-207ENST00000577989 TOP2BQ02880 1626 aa38.49■■■■□ 3.75
CYB561-207ENST00000577989 ERICH3Q5RHP9 1530 aa38.48■■■■□ 3.75
CYB561-207ENST00000577989 PRG4Q92954 1404 aaPredicted RBP38.47■■■■□ 3.75
CYB561-207ENST00000577989 SUPT5HO00267 1087 aaKnown RBP38.36■■■■□ 3.73
CYB561-207ENST00000577989 JPH4Q96JJ6 628 aa38.36■■■■□ 3.73
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms