RNA–Protein interactions for RNA: ENST00000577939.1

SUPT6H-204, Transcript of SPT6 homolog, histone chaperone, humanhuman

TSL 3

Gene SUPT6H, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT6H-204ENST00000577939 NISCHQ9Y2I1 1504 aa25.07■■□□□ 1.6
SUPT6H-204ENST00000577939 CCDC180Q9P1Z9 1646 aa22.59■■□□□ 1.21
SUPT6H-204ENST00000577939 ABCC9O60706 1549 aa22.08■■□□□ 1.13
SUPT6H-204ENST00000577939 RB1CC1Q8TDY2 1594 aa21.31■■□□□ 1
SUPT6H-204ENST00000577939 NACADO15069 1562 aa21.19■□□□□ 0.98
SUPT6H-204ENST00000577939 MYO15BQ96JP2 1530 aa20.99■□□□□ 0.95
SUPT6H-204ENST00000577939 DCAF8L2P0C7V8 631 aa20.9■□□□□ 0.94
SUPT6H-204ENST00000577939 ZCCHC6Q5VYS8 1495 aaKnown RBP20.88■□□□□ 0.93
SUPT6H-204ENST00000577939 UNC13AQ9UPW8 1703 aa20.84■□□□□ 0.93
SUPT6H-204ENST00000577939 DCAF1Q9Y4B6 1507 aa20.81■□□□□ 0.92
SUPT6H-204ENST00000577939 BICRAQ9NZM4 1560 aa20.53■□□□□ 0.88
SUPT6H-204ENST00000577939 SHROOM4Q9ULL8 1493 aa20.5■□□□□ 0.87
SUPT6H-204ENST00000577939 SCRIBQ14160 1630 aa20.47■□□□□ 0.87
SUPT6H-204ENST00000577939 PABPN1Q86U42 306 aaKnown RBP eCLIP20.47■□□□□ 0.872e-7■■■□□ 15
SUPT6H-204ENST00000577939 DNAJC5BQ9UF47 199 aa20.23■□□□□ 0.83
SUPT6H-204ENST00000577939 EIF4G1Q04637 1599 aaKnown RBP20.08■□□□□ 0.8
SUPT6H-204ENST00000577939 CC2D2AQ9P2K1 1620 aa20.05■□□□□ 0.8
SUPT6H-204ENST00000577939 CECR2Q9BXF3 1484 aa19.91■□□□□ 0.78
SUPT6H-204ENST00000577939 SMARCA4P51532 1647 aa19.58■□□□□ 0.72
SUPT6H-204ENST00000577939 BAZ1AQ9NRL2 1556 aaPredicted RBP19.53■□□□□ 0.72
SUPT6H-204ENST00000577939 SMARCA2P51531 1590 aa19.53■□□□□ 0.72
SUPT6H-204ENST00000577939 HMGXB3Q12766 1538 aa19.46■□□□□ 0.71
SUPT6H-204ENST00000577939 NCAPD3P42695 1498 aa19.45■□□□□ 0.7
SUPT6H-204ENST00000577939 ATAD2BQ9ULI0 1458 aa19.43■□□□□ 0.7
SUPT6H-204ENST00000577939 PEG3Q9GZU2 1588 aa19.39■□□□□ 0.69
SUPT6H-204ENST00000577939 BAZ1BQ9UIG0 1483 aaKnown RBP19.34■□□□□ 0.69
SUPT6H-204ENST00000577939 MROH2BQ7Z745 1585 aa19.27■□□□□ 0.67
SUPT6H-204ENST00000577939 ERCC6Q03468 1493 aa19.16■□□□□ 0.66
SUPT6H-204ENST00000577939 WIZO95785 1651 aa19.11■□□□□ 0.65
SUPT6H-204ENST00000577939 LAMC3Q9Y6N6 1575 aa19.1■□□□□ 0.65
SUPT6H-204ENST00000577939 CUX2O14529 1486 aa19.05■□□□□ 0.64
SUPT6H-204ENST00000577939 NESP48681 1621 aa19■□□□□ 0.63
SUPT6H-204ENST00000577939 KIF21AQ7Z4S6 1674 aa18.95■□□□□ 0.62
SUPT6H-204ENST00000577939 TOP2AP11388 1531 aaKnown RBP18.95■□□□□ 0.62
SUPT6H-204ENST00000577939 RSF1Q96T23 1441 aaPredicted RBP18.93■□□□□ 0.62
SUPT6H-204ENST00000577939 THOC2Q8NI27 1593 aaKnown RBP18.93■□□□□ 0.62
SUPT6H-204ENST00000577939 PDS5BQ9NTI5 1447 aa18.92■□□□□ 0.62
SUPT6H-204ENST00000577939 CADPSQ9ULU8 1353 aa18.86■□□□□ 0.61
SUPT6H-204ENST00000577939 PRDM2Q13029 1718 aa18.84■□□□□ 0.61
SUPT6H-204ENST00000577939 CEP164Q9UPV0 1460 aa18.76■□□□□ 0.59
SUPT6H-204ENST00000577939 MRC2Q9UBG0 1479 aa18.75■□□□□ 0.59
SUPT6H-204ENST00000577939 CFTRP13569 1480 aa18.72■□□□□ 0.59
SUPT6H-204ENST00000577939 WDR62O43379 1518 aa18.71■□□□□ 0.59
SUPT6H-204ENST00000577939 FANCD2Q9BXW9 1451 aa18.7■□□□□ 0.58
SUPT6H-204ENST00000577939 CCDC88BA6NC98 1476 aa18.6■□□□□ 0.57
SUPT6H-204ENST00000577939 DNAJC5Q9H3Z4 198 aa18.52■□□□□ 0.56
SUPT6H-204ENST00000577939 URB2Q14146 1524 aaKnown RBP18.49■□□□□ 0.55
SUPT6H-204ENST00000577939 ABCC8Q09428 1581 aa18.43■□□□□ 0.54
SUPT6H-204ENST00000577939 DNMBPQ6XZF7 1577 aa18.4■□□□□ 0.54
SUPT6H-204ENST00000577939 TOPBP1Q92547 1522 aa18.37■□□□□ 0.53
SUPT6H-204ENST00000577939 IFT140Q96RY7 1462 aa18.34■□□□□ 0.53
SUPT6H-204ENST00000577939 EIF4G3O43432 1585 aaKnown RBP18.25■□□□□ 0.51
SUPT6H-204ENST00000577939 SUPT5HO00267 1087 aaKnown RBP18.23■□□□□ 0.51
SUPT6H-204ENST00000577939 TARBP1Q13395 1621 aaKnown RBP18.21■□□□□ 0.51
SUPT6H-204ENST00000577939 WDR97A6NE52 1622 aa18.2■□□□□ 0.5
SUPT6H-204ENST00000577939 POLA1P09884 1462 aaPredicted RBP18.19■□□□□ 0.5
SUPT6H-204ENST00000577939 ZNF608Q9ULD9 1512 aaPredicted RBP18.18■□□□□ 0.5
SUPT6H-204ENST00000577939 FGD5Q6ZNL6 1462 aa18.13■□□□□ 0.49
SUPT6H-204ENST00000577939 CUX1P39880 1505 aa18.13■□□□□ 0.49
SUPT6H-204ENST00000577939 CHD1O14646 1710 aa18.09■□□□□ 0.49
SUPT6H-204ENST00000577939 OSCARQ8IYS5 282 aa18.07■□□□□ 0.48
SUPT6H-204ENST00000577939 SOGA1O94964 1423 aa18.06■□□□□ 0.48
SUPT6H-204ENST00000577939 RAD54L2Q9Y4B4 1467 aa18.04■□□□□ 0.48
SUPT6H-204ENST00000577939 PBRM1Q86U86 1689 aa18.03■□□□□ 0.48
SUPT6H-204ENST00000577939 BIVM-ERCC5R4GMW8 1640 aa18.03■□□□□ 0.48
SUPT6H-204ENST00000577939 AQRO60306 1485 aaKnown RBP eCLIP18.02■□□□□ 0.481e-6■■■■□ 26.2
SUPT6H-204ENST00000577939 TOP2BQ02880 1626 aa17.99■□□□□ 0.47
SUPT6H-204ENST00000577939 MAGI1Q96QZ7 1491 aaPredicted RBP17.98■□□□□ 0.47
SUPT6H-204ENST00000577939 GRIN2BQ13224 1484 aa17.96■□□□□ 0.47
SUPT6H-204ENST00000577939 ABCA5Q8WWZ7 1642 aa17.96■□□□□ 0.47
SUPT6H-204ENST00000577939 SNAPC4Q5SXM2 1469 aa17.95■□□□□ 0.46
SUPT6H-204ENST00000577939 ABCA10Q8WWZ4 1543 aa17.95■□□□□ 0.46
SUPT6H-204ENST00000577939 WRNQ14191 1432 aaPredicted RBP eCLIP17.94■□□□□ 0.46
SUPT6H-204ENST00000577939 TDRD9Q8NDG6 1382 aaKnown RBP17.93■□□□□ 0.46
SUPT6H-204ENST00000577939 RIMBP3CA6NJZ7 1639 aa17.93■□□□□ 0.46
SUPT6H-204ENST00000577939 RIMBP3BA6NNM3 1639 aa17.93■□□□□ 0.46
SUPT6H-204ENST00000577939 RIMBP3Q9UFD9 1639 aa17.93■□□□□ 0.46
SUPT6H-204ENST00000577939 SYNJ1O43426 1573 aa17.92■□□□□ 0.46
SUPT6H-204ENST00000577939 GAPVD1Q14C86 1478 aa17.91■□□□□ 0.46
SUPT6H-204ENST00000577939 SYNJ2O15056 1496 aa17.88■□□□□ 0.45
SUPT6H-204ENST00000577939 ARHGEF11O15085 1522 aa17.88■□□□□ 0.45
SUPT6H-204ENST00000577939 FBLN2P98095 1184 aa17.86■□□□□ 0.45
SUPT6H-204ENST00000577939 TRIM41Q8WV44 630 aa17.85■□□□□ 0.45
SUPT6H-204ENST00000577939 ADAMTS12P58397 1594 aa17.82■□□□□ 0.44
SUPT6H-204ENST00000577939 CLASP1Q7Z460 1538 aa17.82■□□□□ 0.44
SUPT6H-204ENST00000577939 CHMP7Q8WUX9 453 aaPredicted RBP17.8■□□□□ 0.44
SUPT6H-204ENST00000577939 ERICH3Q5RHP9 1530 aa17.78■□□□□ 0.44
SUPT6H-204ENST00000577939 GRIN2AQ12879 1464 aa17.73■□□□□ 0.43
SUPT6H-204ENST00000577939 FHAD1B1AJZ9 1412 aa17.7■□□□□ 0.42
SUPT6H-204ENST00000577939 ARAP1Q96P48 1450 aa17.69■□□□□ 0.42
SUPT6H-204ENST00000577939 CUL7Q14999 1698 aa17.67■□□□□ 0.42
SUPT6H-204ENST00000577939 CEP170Q5SW79 1584 aa17.64■□□□□ 0.41
SUPT6H-204ENST00000577939 NUP160Q12769 1436 aa17.63■□□□□ 0.41
SUPT6H-204ENST00000577939 KIF27Q86VH2 1401 aa17.61■□□□□ 0.41
SUPT6H-204ENST00000577939 SHROOM2Q13796 1616 aa17.59■□□□□ 0.41
SUPT6H-204ENST00000577939 CYB5RLQ6IPT4 315 aa17.58■□□□□ 0.4
SUPT6H-204ENST00000577939 RUSC2Q8N2Y8 1516 aa17.57■□□□□ 0.4
SUPT6H-204ENST00000577939 ERCC6L2Q5T890 1561 aa17.45■□□□□ 0.38
SUPT6H-204ENST00000577939 IGF1RP08069 1367 aa17.42■□□□□ 0.38
SUPT6H-204ENST00000577939 KIAA0586Q9BVV6 1533 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms