RNA–Protein interactions for RNA: ENST00000577936.1

FOXN1-202, Transcript of forkhead box N1, humanhuman

TSL 4

Gene FOXN1, Length 562 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1-202ENST00000577936 NISCHQ9Y2I1 1504 aa35.61■■■■□ 3.29
FOXN1-202ENST00000577936 ABCC9O60706 1549 aa31.92■■■□□ 2.7
FOXN1-202ENST00000577936 CCDC180Q9P1Z9 1646 aa31.89■■■□□ 2.7
FOXN1-202ENST00000577936 RB1CC1Q8TDY2 1594 aa30.36■■■□□ 2.45
FOXN1-202ENST00000577936 NACADO15069 1562 aa30.17■■■□□ 2.42
FOXN1-202ENST00000577936 DCAF8L2P0C7V8 631 aa30.05■■■□□ 2.4
FOXN1-202ENST00000577936 DNAJC5BQ9UF47 199 aa30.01■■■□□ 2.39
FOXN1-202ENST00000577936 MYO15BQ96JP2 1530 aa29.78■■■□□ 2.36
FOXN1-202ENST00000577936 PABPN1Q86U42 306 aaKnown RBP eCLIP29.77■■■□□ 2.36
FOXN1-202ENST00000577936 UNC13AQ9UPW8 1703 aa29.67■■■□□ 2.34
FOXN1-202ENST00000577936 BICRAQ9NZM4 1560 aa29.52■■■□□ 2.32
FOXN1-202ENST00000577936 ZCCHC6Q5VYS8 1495 aaKnown RBP29.52■■■□□ 2.32
FOXN1-202ENST00000577936 DCAF1Q9Y4B6 1507 aa29.4■■■□□ 2.3
FOXN1-202ENST00000577936 SCRIBQ14160 1630 aa29.09■■■□□ 2.25
FOXN1-202ENST00000577936 SHROOM4Q9ULL8 1493 aa29.08■■■□□ 2.25
FOXN1-202ENST00000577936 CC2D2AQ9P2K1 1620 aa28.83■■■□□ 2.21
FOXN1-202ENST00000577936 EIF4G1Q04637 1599 aaKnown RBP28.77■■■□□ 2.2
FOXN1-202ENST00000577936 CECR2Q9BXF3 1484 aa28.75■■■□□ 2.19
FOXN1-202ENST00000577936 NCAPD3P42695 1498 aa27.89■■■□□ 2.05
FOXN1-202ENST00000577936 ATAD2BQ9ULI0 1458 aa27.8■■■□□ 2.04
FOXN1-202ENST00000577936 SMARCA4P51532 1647 aa27.76■■■□□ 2.03
FOXN1-202ENST00000577936 SMARCA2P51531 1590 aa27.69■■■□□ 2.02
FOXN1-202ENST00000577936 HMGXB3Q12766 1538 aa27.65■■■□□ 2.02
FOXN1-202ENST00000577936 BAZ1AQ9NRL2 1556 aaPredicted RBP27.61■■■□□ 2.01
FOXN1-202ENST00000577936 ERCC6Q03468 1493 aa27.53■■■□□ 2
FOXN1-202ENST00000577936 BAZ1BQ9UIG0 1483 aaKnown RBP27.51■■□□□ 1.99
FOXN1-202ENST00000577936 PEG3Q9GZU2 1588 aa27.49■■□□□ 1.99
FOXN1-202ENST00000577936 DNAJC5Q9H3Z4 198 aa27.49■■□□□ 1.99
FOXN1-202ENST00000577936 CUX2O14529 1486 aa27.48■■□□□ 1.99
FOXN1-202ENST00000577936 MROH2BQ7Z745 1585 aa27.46■■□□□ 1.99
FOXN1-202ENST00000577936 NESP48681 1621 aa27.45■■□□□ 1.99
FOXN1-202ENST00000577936 LAMC3Q9Y6N6 1575 aa27.21■■□□□ 1.95
FOXN1-202ENST00000577936 THOC2Q8NI27 1593 aaKnown RBP27.13■■□□□ 1.93
FOXN1-202ENST00000577936 WIZO95785 1651 aa27.1■■□□□ 1.93
FOXN1-202ENST00000577936 PDS5BQ9NTI5 1447 aa27.07■■□□□ 1.92
FOXN1-202ENST00000577936 CADPSQ9ULU8 1353 aa27.04■■□□□ 1.92
FOXN1-202ENST00000577936 KIF21AQ7Z4S6 1674 aa27.04■■□□□ 1.92
FOXN1-202ENST00000577936 RSF1Q96T23 1441 aaPredicted RBP26.9■■□□□ 1.9
FOXN1-202ENST00000577936 MRC2Q9UBG0 1479 aa26.84■■□□□ 1.89
FOXN1-202ENST00000577936 WDR62O43379 1518 aa26.78■■□□□ 1.88
FOXN1-202ENST00000577936 TOP2AP11388 1531 aaKnown RBP26.76■■□□□ 1.87
FOXN1-202ENST00000577936 CFTRP13569 1480 aa26.74■■□□□ 1.87
FOXN1-202ENST00000577936 FANCD2Q9BXW9 1451 aa26.72■■□□□ 1.87
FOXN1-202ENST00000577936 CEP164Q9UPV0 1460 aa26.72■■□□□ 1.87
FOXN1-202ENST00000577936 URB2Q14146 1524 aaKnown RBP26.52■■□□□ 1.84
FOXN1-202ENST00000577936 CCDC88BA6NC98 1476 aa26.49■■□□□ 1.83
FOXN1-202ENST00000577936 PRDM2Q13029 1718 aa26.38■■□□□ 1.81
FOXN1-202ENST00000577936 OSCARQ8IYS5 282 aa26.26■■□□□ 1.79
FOXN1-202ENST00000577936 TRIM41Q8WV44 630 aa26.26■■□□□ 1.79
FOXN1-202ENST00000577936 TOPBP1Q92547 1522 aa26.22■■□□□ 1.79
FOXN1-202ENST00000577936 IFT140Q96RY7 1462 aa26.21■■□□□ 1.79
FOXN1-202ENST00000577936 ZNF608Q9ULD9 1512 aaPredicted RBP26.19■■□□□ 1.78
FOXN1-202ENST00000577936 ABCC8Q09428 1581 aa26.13■■□□□ 1.77
FOXN1-202ENST00000577936 DNMBPQ6XZF7 1577 aa26.11■■□□□ 1.77
FOXN1-202ENST00000577936 EIF4G3O43432 1585 aaKnown RBP26■■□□□ 1.75
FOXN1-202ENST00000577936 TARBP1Q13395 1621 aaKnown RBP25.98■■□□□ 1.75
FOXN1-202ENST00000577936 AQRO60306 1485 aaKnown RBP eCLIP25.96■■□□□ 1.75
FOXN1-202ENST00000577936 POLA1P09884 1462 aaPredicted RBP25.96■■□□□ 1.75
FOXN1-202ENST00000577936 RIMBP3CA6NJZ7 1639 aa25.89■■□□□ 1.74
FOXN1-202ENST00000577936 RIMBP3BA6NNM3 1639 aa25.89■■□□□ 1.74
FOXN1-202ENST00000577936 RIMBP3Q9UFD9 1639 aa25.89■■□□□ 1.74
FOXN1-202ENST00000577936 RAD54L2Q9Y4B4 1467 aa25.88■■□□□ 1.73
FOXN1-202ENST00000577936 SOGA1O94964 1423 aa25.84■■□□□ 1.73
FOXN1-202ENST00000577936 ARHGEF11O15085 1522 aa25.83■■□□□ 1.72
FOXN1-202ENST00000577936 TDRD9Q8NDG6 1382 aaKnown RBP25.81■■□□□ 1.72
FOXN1-202ENST00000577936 FGD5Q6ZNL6 1462 aa25.79■■□□□ 1.72
FOXN1-202ENST00000577936 CHD1O14646 1710 aa25.79■■□□□ 1.72
FOXN1-202ENST00000577936 CUX1P39880 1505 aa25.78■■□□□ 1.72
FOXN1-202ENST00000577936 FBLN2P98095 1184 aa25.76■■□□□ 1.71
FOXN1-202ENST00000577936 SUPT5HO00267 1087 aaKnown RBP25.72■■□□□ 1.71
FOXN1-202ENST00000577936 SNAPC4Q5SXM2 1469 aa25.67■■□□□ 1.7
FOXN1-202ENST00000577936 WDR97A6NE52 1622 aa25.67■■□□□ 1.7
FOXN1-202ENST00000577936 CYB5RLQ6IPT4 315 aa25.65■■□□□ 1.7
FOXN1-202ENST00000577936 GRIN2BQ13224 1484 aa25.6■■□□□ 1.69
FOXN1-202ENST00000577936 MAGI1Q96QZ7 1491 aaPredicted RBP25.6■■□□□ 1.69
FOXN1-202ENST00000577936 ARAP1Q96P48 1450 aa25.59■■□□□ 1.69
FOXN1-202ENST00000577936 CHMP7Q8WUX9 453 aaPredicted RBP25.58■■□□□ 1.69
FOXN1-202ENST00000577936 CLASP1Q7Z460 1538 aa25.53■■□□□ 1.68
FOXN1-202ENST00000577936 GAPVD1Q14C86 1478 aa25.52■■□□□ 1.68
FOXN1-202ENST00000577936 SYNJ2O15056 1496 aa25.51■■□□□ 1.67
FOXN1-202ENST00000577936 ABCA10Q8WWZ4 1543 aa25.51■■□□□ 1.67
FOXN1-202ENST00000577936 SYNJ1O43426 1573 aa25.48■■□□□ 1.67
FOXN1-202ENST00000577936 PBRM1Q86U86 1689 aa25.45■■□□□ 1.67
FOXN1-202ENST00000577936 ABCA5Q8WWZ7 1642 aa25.45■■□□□ 1.67
FOXN1-202ENST00000577936 WRNQ14191 1432 aaPredicted RBP eCLIP25.39■■□□□ 1.66
FOXN1-202ENST00000577936 TOP2BQ02880 1626 aa25.36■■□□□ 1.65
FOXN1-202ENST00000577936 BIVM-ERCC5R4GMW8 1640 aa25.34■■□□□ 1.65
FOXN1-202ENST00000577936 TRHP20396 242 aaPredicted RBP25.33■■□□□ 1.65
FOXN1-202ENST00000577936 GRIN2AQ12879 1464 aa25.28■■□□□ 1.64
FOXN1-202ENST00000577936 ADAMTS12P58397 1594 aa25.25■■□□□ 1.63
FOXN1-202ENST00000577936 NUP160Q12769 1436 aa25.2■■□□□ 1.63
FOXN1-202ENST00000577936 FHAD1B1AJZ9 1412 aa25.2■■□□□ 1.62
FOXN1-202ENST00000577936 CEP170Q5SW79 1584 aa25.19■■□□□ 1.62
FOXN1-202ENST00000577936 ERCC6L2Q5T890 1561 aa25.17■■□□□ 1.62
FOXN1-202ENST00000577936 ERICH3Q5RHP9 1530 aa25.17■■□□□ 1.62
FOXN1-202ENST00000577936 SHROOM2Q13796 1616 aa25.07■■□□□ 1.6
FOXN1-202ENST00000577936 PRG4Q92954 1404 aaPredicted RBP24.95■■□□□ 1.59
FOXN1-202ENST00000577936 JPH4Q96JJ6 628 aa24.95■■□□□ 1.58
FOXN1-202ENST00000577936 RUSC2Q8N2Y8 1516 aa24.9■■□□□ 1.58
FOXN1-202ENST00000577936 IGF1RP08069 1367 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms