RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 NISCHQ9Y2I1 1504 aa35.54■■■■□ 3.28
SMARCD2-205ENST00000577686 ABCC9O60706 1549 aa32.01■■■□□ 2.72
SMARCD2-205ENST00000577686 CCDC180Q9P1Z9 1646 aa32■■■□□ 2.71
SMARCD2-205ENST00000577686 RB1CC1Q8TDY2 1594 aa30.54■■■□□ 2.48
SMARCD2-205ENST00000577686 NACADO15069 1562 aa30.29■■■□□ 2.44
SMARCD2-205ENST00000577686 DCAF8L2P0C7V8 631 aa30.06■■■□□ 2.4
SMARCD2-205ENST00000577686 DNAJC5BQ9UF47 199 aa29.95■■■□□ 2.39
SMARCD2-205ENST00000577686 MYO15BQ96JP2 1530 aa29.86■■■□□ 2.37
SMARCD2-205ENST00000577686 PABPN1Q86U42 306 aaKnown RBP eCLIP29.75■■■□□ 2.35
SMARCD2-205ENST00000577686 UNC13AQ9UPW8 1703 aa29.62■■■□□ 2.33
SMARCD2-205ENST00000577686 BICRAQ9NZM4 1560 aa29.48■■■□□ 2.31
SMARCD2-205ENST00000577686 ZCCHC6Q5VYS8 1495 aaKnown RBP29.45■■■□□ 2.31
SMARCD2-205ENST00000577686 DCAF1Q9Y4B6 1507 aa29.42■■■□□ 2.3
SMARCD2-205ENST00000577686 SHROOM4Q9ULL8 1493 aa29.34■■■□□ 2.29
SMARCD2-205ENST00000577686 SCRIBQ14160 1630 aa29.08■■■□□ 2.25
SMARCD2-205ENST00000577686 CC2D2AQ9P2K1 1620 aa28.91■■■□□ 2.22
SMARCD2-205ENST00000577686 CECR2Q9BXF3 1484 aa28.9■■■□□ 2.22
SMARCD2-205ENST00000577686 EIF4G1Q04637 1599 aaKnown RBP28.85■■■□□ 2.21
SMARCD2-205ENST00000577686 NCAPD3P42695 1498 aa27.92■■■□□ 2.06
SMARCD2-205ENST00000577686 SMARCA2P51531 1590 aa27.82■■■□□ 2.04
SMARCD2-205ENST00000577686 ATAD2BQ9ULI0 1458 aa27.8■■■□□ 2.04
SMARCD2-205ENST00000577686 ERCC6Q03468 1493 aa27.77■■■□□ 2.04
SMARCD2-205ENST00000577686 HMGXB3Q12766 1538 aa27.75■■■□□ 2.03
SMARCD2-205ENST00000577686 CUX2O14529 1486 aa27.75■■■□□ 2.03
SMARCD2-205ENST00000577686 SMARCA4P51532 1647 aa27.74■■■□□ 2.03
SMARCD2-205ENST00000577686 DNAJC5Q9H3Z4 198 aa27.74■■■□□ 2.03
SMARCD2-205ENST00000577686 BAZ1AQ9NRL2 1556 aaPredicted RBP27.67■■■□□ 2.02
SMARCD2-205ENST00000577686 BAZ1BQ9UIG0 1483 aaKnown RBP27.59■■■□□ 2.01
SMARCD2-205ENST00000577686 PEG3Q9GZU2 1588 aa27.49■■□□□ 1.99
SMARCD2-205ENST00000577686 NESP48681 1621 aa27.41■■□□□ 1.98
SMARCD2-205ENST00000577686 LAMC3Q9Y6N6 1575 aa27.35■■□□□ 1.97
SMARCD2-205ENST00000577686 MROH2BQ7Z745 1585 aa27.33■■□□□ 1.97
SMARCD2-205ENST00000577686 PDS5BQ9NTI5 1447 aa27.24■■□□□ 1.95
SMARCD2-205ENST00000577686 THOC2Q8NI27 1593 aaKnown RBP27.21■■□□□ 1.95
SMARCD2-205ENST00000577686 CADPSQ9ULU8 1353 aa27.09■■□□□ 1.93
SMARCD2-205ENST00000577686 KIF21AQ7Z4S6 1674 aa27.08■■□□□ 1.92
SMARCD2-205ENST00000577686 MRC2Q9UBG0 1479 aa26.97■■□□□ 1.91
SMARCD2-205ENST00000577686 WIZO95785 1651 aa26.97■■□□□ 1.91
SMARCD2-205ENST00000577686 WDR62O43379 1518 aa26.87■■□□□ 1.89
SMARCD2-205ENST00000577686 CEP164Q9UPV0 1460 aa26.86■■□□□ 1.89
SMARCD2-205ENST00000577686 FANCD2Q9BXW9 1451 aa26.77■■□□□ 1.88
SMARCD2-205ENST00000577686 RSF1Q96T23 1441 aaPredicted RBP26.75■■□□□ 1.87
SMARCD2-205ENST00000577686 TOP2AP11388 1531 aaKnown RBP26.74■■□□□ 1.87
SMARCD2-205ENST00000577686 CFTRP13569 1480 aa26.74■■□□□ 1.87
SMARCD2-205ENST00000577686 TRIM41Q8WV44 630 aa26.51■■□□□ 1.83
SMARCD2-205ENST00000577686 URB2Q14146 1524 aaKnown RBP26.49■■□□□ 1.83
SMARCD2-205ENST00000577686 OSCARQ8IYS5 282 aa26.44■■□□□ 1.82
SMARCD2-205ENST00000577686 PRDM2Q13029 1718 aa26.44■■□□□ 1.82
SMARCD2-205ENST00000577686 CCDC88BA6NC98 1476 aa26.37■■□□□ 1.81
SMARCD2-205ENST00000577686 IFT140Q96RY7 1462 aa26.33■■□□□ 1.81
SMARCD2-205ENST00000577686 ABCC8Q09428 1581 aa26.3■■□□□ 1.8
SMARCD2-205ENST00000577686 TOPBP1Q92547 1522 aa26.24■■□□□ 1.79
SMARCD2-205ENST00000577686 DNMBPQ6XZF7 1577 aa26.16■■□□□ 1.78
SMARCD2-205ENST00000577686 ZNF608Q9ULD9 1512 aaPredicted RBP26.16■■□□□ 1.78
SMARCD2-205ENST00000577686 EIF4G3O43432 1585 aaKnown RBP26.07■■□□□ 1.76
SMARCD2-205ENST00000577686 RIMBP3CA6NJZ7 1639 aa26.02■■□□□ 1.76
SMARCD2-205ENST00000577686 RIMBP3BA6NNM3 1639 aa26.02■■□□□ 1.76
SMARCD2-205ENST00000577686 RIMBP3Q9UFD9 1639 aa26.02■■□□□ 1.76
SMARCD2-205ENST00000577686 ARHGEF11O15085 1522 aa25.97■■□□□ 1.75
SMARCD2-205ENST00000577686 TARBP1Q13395 1621 aaKnown RBP25.96■■□□□ 1.75
SMARCD2-205ENST00000577686 POLA1P09884 1462 aaPredicted RBP25.95■■□□□ 1.74
SMARCD2-205ENST00000577686 AQRO60306 1485 aaKnown RBP eCLIP25.93■■□□□ 1.743e-8■■■■□ 23.4
SMARCD2-205ENST00000577686 FBLN2P98095 1184 aa25.87■■□□□ 1.73
SMARCD2-205ENST00000577686 SOGA1O94964 1423 aa25.87■■□□□ 1.73
SMARCD2-205ENST00000577686 WDR97A6NE52 1622 aa25.85■■□□□ 1.73
SMARCD2-205ENST00000577686 CHD1O14646 1710 aa25.85■■□□□ 1.73
SMARCD2-205ENST00000577686 RAD54L2Q9Y4B4 1467 aa25.8■■□□□ 1.72
SMARCD2-205ENST00000577686 FGD5Q6ZNL6 1462 aa25.79■■□□□ 1.72
SMARCD2-205ENST00000577686 TDRD9Q8NDG6 1382 aaKnown RBP25.78■■□□□ 1.72
SMARCD2-205ENST00000577686 CYB5RLQ6IPT4 315 aa25.77■■□□□ 1.72
SMARCD2-205ENST00000577686 SNAPC4Q5SXM2 1469 aa25.72■■□□□ 1.71
SMARCD2-205ENST00000577686 MAGI1Q96QZ7 1491 aaPredicted RBP25.72■■□□□ 1.71
SMARCD2-205ENST00000577686 CUX1P39880 1505 aa25.7■■□□□ 1.7
SMARCD2-205ENST00000577686 CHMP7Q8WUX9 453 aaPredicted RBP25.7■■□□□ 1.7
SMARCD2-205ENST00000577686 GRIN2BQ13224 1484 aa25.69■■□□□ 1.7
SMARCD2-205ENST00000577686 ARAP1Q96P48 1450 aa25.67■■□□□ 1.7
SMARCD2-205ENST00000577686 SYNJ1O43426 1573 aa25.66■■□□□ 1.7
SMARCD2-205ENST00000577686 SYNJ2O15056 1496 aa25.61■■□□□ 1.69
SMARCD2-205ENST00000577686 CLASP1Q7Z460 1538 aa25.59■■□□□ 1.69
SMARCD2-205ENST00000577686 TRHP20396 242 aaPredicted RBP25.59■■□□□ 1.69
SMARCD2-205ENST00000577686 GAPVD1Q14C86 1478 aa25.56■■□□□ 1.68
SMARCD2-205ENST00000577686 SUPT5HO00267 1087 aaKnown RBP25.52■■□□□ 1.68
SMARCD2-205ENST00000577686 ABCA10Q8WWZ4 1543 aa25.51■■□□□ 1.67
SMARCD2-205ENST00000577686 PBRM1Q86U86 1689 aa25.5■■□□□ 1.67
SMARCD2-205ENST00000577686 ABCA5Q8WWZ7 1642 aa25.45■■□□□ 1.66
SMARCD2-205ENST00000577686 WRNQ14191 1432 aaPredicted RBP eCLIP25.44■■□□□ 1.66
SMARCD2-205ENST00000577686 GRIN2AQ12879 1464 aa25.33■■□□□ 1.65
SMARCD2-205ENST00000577686 TOP2BQ02880 1626 aa25.31■■□□□ 1.64
SMARCD2-205ENST00000577686 BIVM-ERCC5R4GMW8 1640 aa25.3■■□□□ 1.64
SMARCD2-205ENST00000577686 ADAMTS12P58397 1594 aa25.28■■□□□ 1.64
SMARCD2-205ENST00000577686 FHAD1B1AJZ9 1412 aa25.26■■□□□ 1.63
SMARCD2-205ENST00000577686 NUP160Q12769 1436 aa25.23■■□□□ 1.63
SMARCD2-205ENST00000577686 ERICH3Q5RHP9 1530 aa25.22■■□□□ 1.63
SMARCD2-205ENST00000577686 CEP170Q5SW79 1584 aa25.17■■□□□ 1.62
SMARCD2-205ENST00000577686 SHROOM2Q13796 1616 aa25.1■■□□□ 1.61
SMARCD2-205ENST00000577686 ERCC6L2Q5T890 1561 aa25.08■■□□□ 1.61
SMARCD2-205ENST00000577686 PRG4Q92954 1404 aaPredicted RBP25.01■■□□□ 1.59
SMARCD2-205ENST00000577686 AEBP2Q6ZN18 517 aaPredicted RBP24.99■■□□□ 1.59
SMARCD2-205ENST00000577686 JPH4Q96JJ6 628 aa24.98■■□□□ 1.59
SMARCD2-205ENST00000577686 RUSC2Q8N2Y8 1516 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms