RNA–Protein interactions for RNA: ENST00000577637.1

THRA-207, Transcript of thyroid hormone receptor alpha, humanhuman

TSL 2

Gene THRA, Length 677 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THRA-207ENST00000577637 NISCHQ9Y2I1 1504 aa27.38■■□□□ 1.97
THRA-207ENST00000577637 CCDC180Q9P1Z9 1646 aa24.28■■□□□ 1.48
THRA-207ENST00000577637 ABCC9O60706 1549 aa23.09■■□□□ 1.29
THRA-207ENST00000577637 ZCCHC6Q5VYS8 1495 aaKnown RBP22.92■■□□□ 1.26
THRA-207ENST00000577637 DCAF1Q9Y4B6 1507 aa22.79■■□□□ 1.24
THRA-207ENST00000577637 MYO15BQ96JP2 1530 aa22.75■■□□□ 1.23
THRA-207ENST00000577637 NACADO15069 1562 aa22.67■■□□□ 1.22
THRA-207ENST00000577637 RB1CC1Q8TDY2 1594 aa22.58■■□□□ 1.2
THRA-207ENST00000577637 DCAF8L2P0C7V8 631 aa22.51■■□□□ 1.19
THRA-207ENST00000577637 UNC13AQ9UPW8 1703 aa22.03■■□□□ 1.12
THRA-207ENST00000577637 SCRIBQ14160 1630 aa22.02■■□□□ 1.12
THRA-207ENST00000577637 SHROOM4Q9ULL8 1493 aa21.81■■□□□ 1.08
THRA-207ENST00000577637 BICRAQ9NZM4 1560 aa21.78■■□□□ 1.08
THRA-207ENST00000577637 PABPN1Q86U42 306 aaKnown RBP eCLIP21.56■■□□□ 1.04
THRA-207ENST00000577637 DNAJC5BQ9UF47 199 aa21.42■■□□□ 1.02
THRA-207ENST00000577637 BAZ1AQ9NRL2 1556 aaPredicted RBP21.25■□□□□ 0.99
THRA-207ENST00000577637 EIF4G1Q04637 1599 aaKnown RBP21.21■□□□□ 0.99
THRA-207ENST00000577637 SMARCA4P51532 1647 aa21.18■□□□□ 0.98
THRA-207ENST00000577637 CECR2Q9BXF3 1484 aa21.16■□□□□ 0.98
THRA-207ENST00000577637 MROH2BQ7Z745 1585 aa21.04■□□□□ 0.96
THRA-207ENST00000577637 PEG3Q9GZU2 1588 aa21.02■□□□□ 0.96
THRA-207ENST00000577637 SMARCA2P51531 1590 aa20.99■□□□□ 0.95
THRA-207ENST00000577637 CC2D2AQ9P2K1 1620 aa20.99■□□□□ 0.95
THRA-207ENST00000577637 RSF1Q96T23 1441 aaPredicted RBP20.97■□□□□ 0.95
THRA-207ENST00000577637 ATAD2BQ9ULI0 1458 aa20.9■□□□□ 0.94
THRA-207ENST00000577637 HMGXB3Q12766 1538 aa20.86■□□□□ 0.93
THRA-207ENST00000577637 NCAPD3P42695 1498 aa20.86■□□□□ 0.93
THRA-207ENST00000577637 WIZO95785 1651 aa20.86■□□□□ 0.93
THRA-207ENST00000577637 BAZ1BQ9UIG0 1483 aaKnown RBP20.79■□□□□ 0.92
THRA-207ENST00000577637 TOP2AP11388 1531 aaKnown RBP20.74■□□□□ 0.91
THRA-207ENST00000577637 SUPT5HO00267 1087 aaKnown RBP20.66■□□□□ 0.9
THRA-207ENST00000577637 CCDC88BA6NC98 1476 aa20.41■□□□□ 0.86
THRA-207ENST00000577637 LAMC3Q9Y6N6 1575 aa20.3■□□□□ 0.84
THRA-207ENST00000577637 PRDM2Q13029 1718 aa20.26■□□□□ 0.83
THRA-207ENST00000577637 CFTRP13569 1480 aa20.24■□□□□ 0.83
THRA-207ENST00000577637 CADPSQ9ULU8 1353 aa20.24■□□□□ 0.83
THRA-207ENST00000577637 PDS5BQ9NTI5 1447 aa20.1■□□□□ 0.81
THRA-207ENST00000577637 NESP48681 1621 aa20.09■□□□□ 0.81
THRA-207ENST00000577637 FANCD2Q9BXW9 1451 aa20.01■□□□□ 0.79
THRA-207ENST00000577637 KIF21AQ7Z4S6 1674 aa19.98■□□□□ 0.79
THRA-207ENST00000577637 CEP164Q9UPV0 1460 aa19.98■□□□□ 0.79
THRA-207ENST00000577637 ERCC6Q03468 1493 aa19.95■□□□□ 0.78
THRA-207ENST00000577637 DNAJC5Q9H3Z4 198 aa19.95■□□□□ 0.78
THRA-207ENST00000577637 ABCC8Q09428 1581 aa19.88■□□□□ 0.77
THRA-207ENST00000577637 MRC2Q9UBG0 1479 aa19.86■□□□□ 0.77
THRA-207ENST00000577637 THOC2Q8NI27 1593 aaKnown RBP19.83■□□□□ 0.76
THRA-207ENST00000577637 DNMBPQ6XZF7 1577 aa19.82■□□□□ 0.76
THRA-207ENST00000577637 WRNQ14191 1432 aaPredicted RBP eCLIP19.81■□□□□ 0.76
THRA-207ENST00000577637 WDR62O43379 1518 aa19.8■□□□□ 0.76
THRA-207ENST00000577637 BIVM-ERCC5R4GMW8 1640 aa19.78■□□□□ 0.76
THRA-207ENST00000577637 TOP2BQ02880 1626 aa19.76■□□□□ 0.75
THRA-207ENST00000577637 URB2Q14146 1524 aaKnown RBP19.75■□□□□ 0.75
THRA-207ENST00000577637 TOPBP1Q92547 1522 aa19.74■□□□□ 0.75
THRA-207ENST00000577637 CUX1P39880 1505 aa19.73■□□□□ 0.75
THRA-207ENST00000577637 SYNJ1O43426 1573 aa19.71■□□□□ 0.75
THRA-207ENST00000577637 CUX2O14529 1486 aa19.65■□□□□ 0.74
THRA-207ENST00000577637 FGD5Q6ZNL6 1462 aa19.61■□□□□ 0.73
THRA-207ENST00000577637 POLA1P09884 1462 aaPredicted RBP19.6■□□□□ 0.73
THRA-207ENST00000577637 CHIC1Q5VXU3 224 aa19.59■□□□□ 0.73
THRA-207ENST00000577637 TRIM41Q8WV44 630 aa19.59■□□□□ 0.73
THRA-207ENST00000577637 IFT140Q96RY7 1462 aa19.55■□□□□ 0.72
THRA-207ENST00000577637 WDR97A6NE52 1622 aa19.55■□□□□ 0.72
THRA-207ENST00000577637 TARBP1Q13395 1621 aaKnown RBP19.52■□□□□ 0.72
THRA-207ENST00000577637 SOGA1O94964 1423 aa19.51■□□□□ 0.71
THRA-207ENST00000577637 ABCA10Q8WWZ4 1543 aa19.5■□□□□ 0.71
THRA-207ENST00000577637 RAD54L2Q9Y4B4 1467 aa19.43■□□□□ 0.7
THRA-207ENST00000577637 EEA1Q15075 1411 aa19.39■□□□□ 0.69
THRA-207ENST00000577637 KIF27Q86VH2 1401 aa19.39■□□□□ 0.69
THRA-207ENST00000577637 ABCA5Q8WWZ7 1642 aa19.39■□□□□ 0.69
THRA-207ENST00000577637 EIF4G3O43432 1585 aaKnown RBP19.36■□□□□ 0.69
THRA-207ENST00000577637 GAPVD1Q14C86 1478 aa19.33■□□□□ 0.68
THRA-207ENST00000577637 PBRM1Q86U86 1689 aa19.31■□□□□ 0.68
THRA-207ENST00000577637 ERICH3Q5RHP9 1530 aa19.3■□□□□ 0.68
THRA-207ENST00000577637 ZNF608Q9ULD9 1512 aaPredicted RBP19.3■□□□□ 0.68
THRA-207ENST00000577637 GRIN2BQ13224 1484 aa19.28■□□□□ 0.68
THRA-207ENST00000577637 TDRD9Q8NDG6 1382 aaKnown RBP19.28■□□□□ 0.68
THRA-207ENST00000577637 CUL7Q14999 1698 aa19.26■□□□□ 0.67
THRA-207ENST00000577637 AQRO60306 1485 aaKnown RBP eCLIP19.25■□□□□ 0.67
THRA-207ENST00000577637 MAGI1Q96QZ7 1491 aaPredicted RBP19.22■□□□□ 0.67
THRA-207ENST00000577637 RUSC2Q8N2Y8 1516 aa19.18■□□□□ 0.66
THRA-207ENST00000577637 IGF1RP08069 1367 aa19.17■□□□□ 0.66
THRA-207ENST00000577637 ADAMTS12P58397 1594 aa19.16■□□□□ 0.66
THRA-207ENST00000577637 CSRNP3Q8WYN3 585 aa19.15■□□□□ 0.66
THRA-207ENST00000577637 SNAPC4Q5SXM2 1469 aa19.15■□□□□ 0.66
THRA-207ENST00000577637 FHAD1B1AJZ9 1412 aa19.14■□□□□ 0.65
THRA-207ENST00000577637 KIF21BO75037 1637 aa19.12■□□□□ 0.65
THRA-207ENST00000577637 SYNJ2O15056 1496 aa19.11■□□□□ 0.65
THRA-207ENST00000577637 PRXQ9BXM0 1461 aa19.1■□□□□ 0.65
THRA-207ENST00000577637 CARMIL1Q5VZK9 1371 aa19.09■□□□□ 0.65
THRA-207ENST00000577637 RAPGEF2Q9Y4G8 1499 aa19.07■□□□□ 0.64
THRA-207ENST00000577637 FAM9AQ8IZU1 332 aaPredicted RBP19.04■□□□□ 0.64
THRA-207ENST00000577637 GRIN2AQ12879 1464 aa19.03■□□□□ 0.64
THRA-207ENST00000577637 CHD1O14646 1710 aa19.02■□□□□ 0.63
THRA-207ENST00000577637 GOLGA3Q08378 1498 aa19.01■□□□□ 0.63
THRA-207ENST00000577637 CHMP7Q8WUX9 453 aaPredicted RBP18.99■□□□□ 0.63
THRA-207ENST00000577637 CTTNBP2Q8WZ74 1663 aa18.95■□□□□ 0.62
THRA-207ENST00000577637 NUP160Q12769 1436 aa18.92■□□□□ 0.62
THRA-207ENST00000577637 FBLN2P98095 1184 aa18.9■□□□□ 0.62
THRA-207ENST00000577637 CEP170Q5SW79 1584 aa18.88■□□□□ 0.61
THRA-207ENST00000577637 KIAA0586Q9BVV6 1533 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms