RNA–Protein interactions for RNA: ENST00000577617.5

C19orf47-203, Transcript of chromosome 19 open reading frame 47, humanhuman

TSL 3

Gene C19orf47, Length 550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf47-203ENST00000577617 NISCHQ9Y2I1 1504 aa35.67■■■■□ 3.3
C19orf47-203ENST00000577617 CCDC180Q9P1Z9 1646 aa32.04■■■□□ 2.72
C19orf47-203ENST00000577617 ABCC9O60706 1549 aa31.85■■■□□ 2.69
C19orf47-203ENST00000577617 RB1CC1Q8TDY2 1594 aa30.43■■■□□ 2.46
C19orf47-203ENST00000577617 NACADO15069 1562 aa30.21■■■□□ 2.43
C19orf47-203ENST00000577617 DCAF8L2P0C7V8 631 aa30.18■■■□□ 2.42
C19orf47-203ENST00000577617 MYO15BQ96JP2 1530 aa29.76■■■□□ 2.36
C19orf47-203ENST00000577617 UNC13AQ9UPW8 1703 aa29.73■■■□□ 2.35
C19orf47-203ENST00000577617 PABPN1Q86U42 306 aaKnown RBP eCLIP29.64■■■□□ 2.34
C19orf47-203ENST00000577617 ZCCHC6Q5VYS8 1495 aaKnown RBP29.61■■■□□ 2.33
C19orf47-203ENST00000577617 DNAJC5BQ9UF47 199 aa29.52■■■□□ 2.32
C19orf47-203ENST00000577617 DCAF1Q9Y4B6 1507 aa29.45■■■□□ 2.31
C19orf47-203ENST00000577617 BICRAQ9NZM4 1560 aa29.39■■■□□ 2.3
C19orf47-203ENST00000577617 SCRIBQ14160 1630 aa29.24■■■□□ 2.27
C19orf47-203ENST00000577617 SHROOM4Q9ULL8 1493 aa29.1■■■□□ 2.25
C19orf47-203ENST00000577617 CC2D2AQ9P2K1 1620 aa28.78■■■□□ 2.2
C19orf47-203ENST00000577617 EIF4G1Q04637 1599 aaKnown RBP28.74■■■□□ 2.19
C19orf47-203ENST00000577617 CECR2Q9BXF3 1484 aa28.66■■■□□ 2.18
C19orf47-203ENST00000577617 SMARCA4P51532 1647 aa27.85■■■□□ 2.05
C19orf47-203ENST00000577617 NCAPD3P42695 1498 aa27.8■■■□□ 2.04
C19orf47-203ENST00000577617 SMARCA2P51531 1590 aa27.8■■■□□ 2.04
C19orf47-203ENST00000577617 ATAD2BQ9ULI0 1458 aa27.77■■■□□ 2.04
C19orf47-203ENST00000577617 BAZ1AQ9NRL2 1556 aaPredicted RBP27.75■■■□□ 2.03
C19orf47-203ENST00000577617 HMGXB3Q12766 1538 aa27.69■■■□□ 2.02
C19orf47-203ENST00000577617 BAZ1BQ9UIG0 1483 aaKnown RBP27.62■■■□□ 2.01
C19orf47-203ENST00000577617 ERCC6Q03468 1493 aa27.59■■■□□ 2.01
C19orf47-203ENST00000577617 PEG3Q9GZU2 1588 aa27.51■■□□□ 1.99
C19orf47-203ENST00000577617 MROH2BQ7Z745 1585 aa27.48■■□□□ 1.99
C19orf47-203ENST00000577617 CUX2O14529 1486 aa27.38■■□□□ 1.97
C19orf47-203ENST00000577617 NESP48681 1621 aa27.36■■□□□ 1.97
C19orf47-203ENST00000577617 LAMC3Q9Y6N6 1575 aa27.25■■□□□ 1.95
C19orf47-203ENST00000577617 WIZO95785 1651 aa27.23■■□□□ 1.95
C19orf47-203ENST00000577617 KIF21AQ7Z4S6 1674 aa27.11■■□□□ 1.93
C19orf47-203ENST00000577617 THOC2Q8NI27 1593 aaKnown RBP27.09■■□□□ 1.93
C19orf47-203ENST00000577617 PDS5BQ9NTI5 1447 aa27.08■■□□□ 1.93
C19orf47-203ENST00000577617 DNAJC5Q9H3Z4 198 aa27.06■■□□□ 1.92
C19orf47-203ENST00000577617 CADPSQ9ULU8 1353 aa26.99■■□□□ 1.91
C19orf47-203ENST00000577617 RSF1Q96T23 1441 aaPredicted RBP26.95■■□□□ 1.9
C19orf47-203ENST00000577617 TOP2AP11388 1531 aaKnown RBP26.9■■□□□ 1.9
C19orf47-203ENST00000577617 MRC2Q9UBG0 1479 aa26.85■■□□□ 1.89
C19orf47-203ENST00000577617 CEP164Q9UPV0 1460 aa26.81■■□□□ 1.88
C19orf47-203ENST00000577617 FANCD2Q9BXW9 1451 aa26.75■■□□□ 1.87
C19orf47-203ENST00000577617 WDR62O43379 1518 aa26.75■■□□□ 1.87
C19orf47-203ENST00000577617 CFTRP13569 1480 aa26.71■■□□□ 1.87
C19orf47-203ENST00000577617 PRDM2Q13029 1718 aa26.65■■□□□ 1.86
C19orf47-203ENST00000577617 CCDC88BA6NC98 1476 aa26.53■■□□□ 1.84
C19orf47-203ENST00000577617 URB2Q14146 1524 aaKnown RBP26.47■■□□□ 1.83
C19orf47-203ENST00000577617 TOPBP1Q92547 1522 aa26.25■■□□□ 1.79
C19orf47-203ENST00000577617 ABCC8Q09428 1581 aa26.24■■□□□ 1.79
C19orf47-203ENST00000577617 IFT140Q96RY7 1462 aa26.23■■□□□ 1.79
C19orf47-203ENST00000577617 DNMBPQ6XZF7 1577 aa26.2■■□□□ 1.79
C19orf47-203ENST00000577617 OSCARQ8IYS5 282 aa26.14■■□□□ 1.78
C19orf47-203ENST00000577617 TRIM41Q8WV44 630 aa26.12■■□□□ 1.77
C19orf47-203ENST00000577617 ZNF608Q9ULD9 1512 aaPredicted RBP26.12■■□□□ 1.77
C19orf47-203ENST00000577617 EIF4G3O43432 1585 aaKnown RBP26.07■■□□□ 1.76
C19orf47-203ENST00000577617 SUPT5HO00267 1087 aaKnown RBP26.03■■□□□ 1.76
C19orf47-203ENST00000577617 POLA1P09884 1462 aaPredicted RBP25.98■■□□□ 1.75
C19orf47-203ENST00000577617 TARBP1Q13395 1621 aaKnown RBP25.97■■□□□ 1.75
C19orf47-203ENST00000577617 AQRO60306 1485 aaKnown RBP eCLIP25.91■■□□□ 1.744e-6■■■□□ 17.5
C19orf47-203ENST00000577617 CHD1O14646 1710 aa25.89■■□□□ 1.74
C19orf47-203ENST00000577617 SOGA1O94964 1423 aa25.88■■□□□ 1.73
C19orf47-203ENST00000577617 FGD5Q6ZNL6 1462 aa25.87■■□□□ 1.73
C19orf47-203ENST00000577617 RAD54L2Q9Y4B4 1467 aa25.87■■□□□ 1.73
C19orf47-203ENST00000577617 CUX1P39880 1505 aa25.83■■□□□ 1.73
C19orf47-203ENST00000577617 FBLN2P98095 1184 aa25.83■■□□□ 1.73
C19orf47-203ENST00000577617 RIMBP3CA6NJZ7 1639 aa25.82■■□□□ 1.72
C19orf47-203ENST00000577617 RIMBP3BA6NNM3 1639 aa25.82■■□□□ 1.72
C19orf47-203ENST00000577617 RIMBP3Q9UFD9 1639 aa25.82■■□□□ 1.72
C19orf47-203ENST00000577617 WDR97A6NE52 1622 aa25.79■■□□□ 1.72
C19orf47-203ENST00000577617 TDRD9Q8NDG6 1382 aaKnown RBP25.79■■□□□ 1.72
C19orf47-203ENST00000577617 ARHGEF11O15085 1522 aa25.73■■□□□ 1.71
C19orf47-203ENST00000577617 SNAPC4Q5SXM2 1469 aa25.72■■□□□ 1.71
C19orf47-203ENST00000577617 GRIN2BQ13224 1484 aa25.66■■□□□ 1.7
C19orf47-203ENST00000577617 PBRM1Q86U86 1689 aa25.65■■□□□ 1.7
C19orf47-203ENST00000577617 MAGI1Q96QZ7 1491 aaPredicted RBP25.65■■□□□ 1.7
C19orf47-203ENST00000577617 CHMP7Q8WUX9 453 aaPredicted RBP25.62■■□□□ 1.69
C19orf47-203ENST00000577617 SYNJ1O43426 1573 aa25.6■■□□□ 1.69
C19orf47-203ENST00000577617 GAPVD1Q14C86 1478 aa25.59■■□□□ 1.69
C19orf47-203ENST00000577617 ABCA10Q8WWZ4 1543 aa25.55■■□□□ 1.68
C19orf47-203ENST00000577617 SYNJ2O15056 1496 aa25.54■■□□□ 1.68
C19orf47-203ENST00000577617 ABCA5Q8WWZ7 1642 aa25.53■■□□□ 1.68
C19orf47-203ENST00000577617 CYB5RLQ6IPT4 315 aa25.53■■□□□ 1.68
C19orf47-203ENST00000577617 WRNQ14191 1432 aaPredicted RBP eCLIP25.53■■□□□ 1.68
C19orf47-203ENST00000577617 BIVM-ERCC5R4GMW8 1640 aa25.52■■□□□ 1.68
C19orf47-203ENST00000577617 TOP2BQ02880 1626 aa25.5■■□□□ 1.67
C19orf47-203ENST00000577617 CLASP1Q7Z460 1538 aa25.47■■□□□ 1.67
C19orf47-203ENST00000577617 ARAP1Q96P48 1450 aa25.46■■□□□ 1.67
C19orf47-203ENST00000577617 ADAMTS12P58397 1594 aa25.36■■□□□ 1.65
C19orf47-203ENST00000577617 GRIN2AQ12879 1464 aa25.32■■□□□ 1.64
C19orf47-203ENST00000577617 TRHP20396 242 aaPredicted RBP25.3■■□□□ 1.64
C19orf47-203ENST00000577617 ERICH3Q5RHP9 1530 aa25.27■■□□□ 1.64
C19orf47-203ENST00000577617 FHAD1B1AJZ9 1412 aa25.26■■□□□ 1.63
C19orf47-203ENST00000577617 CEP170Q5SW79 1584 aa25.22■■□□□ 1.63
C19orf47-203ENST00000577617 NUP160Q12769 1436 aa25.17■■□□□ 1.62
C19orf47-203ENST00000577617 ERCC6L2Q5T890 1561 aa25.08■■□□□ 1.61
C19orf47-203ENST00000577617 SHROOM2Q13796 1616 aa25.07■■□□□ 1.6
C19orf47-203ENST00000577617 KIF27Q86VH2 1401 aa25.04■■□□□ 1.6
C19orf47-203ENST00000577617 CUL7Q14999 1698 aa25.01■■□□□ 1.59
C19orf47-203ENST00000577617 RUSC2Q8N2Y8 1516 aa24.99■■□□□ 1.59
C19orf47-203ENST00000577617 PRG4Q92954 1404 aaPredicted RBP24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms