RNA–Protein interactions for RNA: ENST00000577586.5

ATPAF2-210, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 4

Gene ATPAF2, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-210ENST00000577586 NISCHQ9Y2I1 1504 aa40.91■■■■■ 4.14
ATPAF2-210ENST00000577586 CCDC180Q9P1Z9 1646 aa36.67■■■■□ 3.46
ATPAF2-210ENST00000577586 ABCC9O60706 1549 aa36.45■■■■□ 3.43
ATPAF2-210ENST00000577586 RB1CC1Q8TDY2 1594 aa34.84■■■■□ 3.17
ATPAF2-210ENST00000577586 NACADO15069 1562 aa34.66■■■■□ 3.14
ATPAF2-210ENST00000577586 DCAF8L2P0C7V8 631 aa34.36■■■■□ 3.09
ATPAF2-210ENST00000577586 MYO15BQ96JP2 1530 aa34.3■■■■□ 3.08
ATPAF2-210ENST00000577586 DNAJC5BQ9UF47 199 aa34.07■■■■□ 3.04
ATPAF2-210ENST00000577586 UNC13AQ9UPW8 1703 aa33.95■■■■□ 3.03
ATPAF2-210ENST00000577586 PABPN1Q86U42 306 aaKnown RBP eCLIP33.93■■■■□ 3.02
ATPAF2-210ENST00000577586 ZCCHC6Q5VYS8 1495 aaKnown RBP33.93■■■■□ 3.02
ATPAF2-210ENST00000577586 DCAF1Q9Y4B6 1507 aa33.88■■■■□ 3.01
ATPAF2-210ENST00000577586 BICRAQ9NZM4 1560 aa33.77■■■■□ 3
ATPAF2-210ENST00000577586 SHROOM4Q9ULL8 1493 aa33.49■■■□□ 2.95
ATPAF2-210ENST00000577586 SCRIBQ14160 1630 aa33.31■■■□□ 2.92
ATPAF2-210ENST00000577586 CC2D2AQ9P2K1 1620 aa32.96■■■□□ 2.87
ATPAF2-210ENST00000577586 EIF4G1Q04637 1599 aaKnown RBP32.95■■■□□ 2.86
ATPAF2-210ENST00000577586 CECR2Q9BXF3 1484 aa32.87■■■□□ 2.85
ATPAF2-210ENST00000577586 NCAPD3P42695 1498 aa32.01■■■□□ 2.71
ATPAF2-210ENST00000577586 ATAD2BQ9ULI0 1458 aa31.88■■■□□ 2.69
ATPAF2-210ENST00000577586 SMARCA4P51532 1647 aa31.86■■■□□ 2.69
ATPAF2-210ENST00000577586 SMARCA2P51531 1590 aa31.83■■■□□ 2.69
ATPAF2-210ENST00000577586 HMGXB3Q12766 1538 aa31.77■■■□□ 2.68
ATPAF2-210ENST00000577586 BAZ1AQ9NRL2 1556 aaPredicted RBP31.76■■■□□ 2.67
ATPAF2-210ENST00000577586 PEG3Q9GZU2 1588 aa31.61■■■□□ 2.65
ATPAF2-210ENST00000577586 BAZ1BQ9UIG0 1483 aaKnown RBP31.57■■■□□ 2.64
ATPAF2-210ENST00000577586 ERCC6Q03468 1493 aa31.51■■■□□ 2.63
ATPAF2-210ENST00000577586 CUX2O14529 1486 aa31.47■■■□□ 2.63
ATPAF2-210ENST00000577586 MROH2BQ7Z745 1585 aa31.47■■■□□ 2.63
ATPAF2-210ENST00000577586 NESP48681 1621 aa31.34■■■□□ 2.61
ATPAF2-210ENST00000577586 DNAJC5Q9H3Z4 198 aa31.29■■■□□ 2.6
ATPAF2-210ENST00000577586 LAMC3Q9Y6N6 1575 aa31.25■■■□□ 2.59
ATPAF2-210ENST00000577586 PDS5BQ9NTI5 1447 aa31.07■■■□□ 2.57
ATPAF2-210ENST00000577586 WIZO95785 1651 aa31.06■■■□□ 2.56
ATPAF2-210ENST00000577586 THOC2Q8NI27 1593 aaKnown RBP31.04■■■□□ 2.56
ATPAF2-210ENST00000577586 CADPSQ9ULU8 1353 aa31.02■■■□□ 2.56
ATPAF2-210ENST00000577586 KIF21AQ7Z4S6 1674 aa30.93■■■□□ 2.54
ATPAF2-210ENST00000577586 RSF1Q96T23 1441 aaPredicted RBP30.9■■■□□ 2.54
ATPAF2-210ENST00000577586 MRC2Q9UBG0 1479 aa30.76■■■□□ 2.52
ATPAF2-210ENST00000577586 TOP2AP11388 1531 aaKnown RBP30.76■■■□□ 2.51
ATPAF2-210ENST00000577586 CFTRP13569 1480 aa30.69■■■□□ 2.5
ATPAF2-210ENST00000577586 WDR62O43379 1518 aa30.68■■■□□ 2.5
ATPAF2-210ENST00000577586 CEP164Q9UPV0 1460 aa30.66■■■□□ 2.5
ATPAF2-210ENST00000577586 FANCD2Q9BXW9 1451 aa30.63■■■□□ 2.49
ATPAF2-210ENST00000577586 CCDC88BA6NC98 1476 aa30.38■■■□□ 2.45
ATPAF2-210ENST00000577586 URB2Q14146 1524 aaKnown RBP30.35■■■□□ 2.45
ATPAF2-210ENST00000577586 PRDM2Q13029 1718 aa30.34■■■□□ 2.45
ATPAF2-210ENST00000577586 ABCC8Q09428 1581 aa30.1■■■□□ 2.41
ATPAF2-210ENST00000577586 IFT140Q96RY7 1462 aa30.07■■■□□ 2.4
ATPAF2-210ENST00000577586 TOPBP1Q92547 1522 aa30.06■■■□□ 2.4
ATPAF2-210ENST00000577586 OSCARQ8IYS5 282 aa30.04■■■□□ 2.4
ATPAF2-210ENST00000577586 DNMBPQ6XZF7 1577 aa29.98■■■□□ 2.39
ATPAF2-210ENST00000577586 ZNF608Q9ULD9 1512 aaPredicted RBP29.92■■■□□ 2.38
ATPAF2-210ENST00000577586 TRIM41Q8WV44 630 aa29.86■■■□□ 2.37
ATPAF2-210ENST00000577586 EIF4G3O43432 1585 aaKnown RBP29.78■■■□□ 2.36
ATPAF2-210ENST00000577586 TARBP1Q13395 1621 aaKnown RBP29.78■■■□□ 2.36
ATPAF2-210ENST00000577586 POLA1P09884 1462 aaPredicted RBP29.76■■■□□ 2.35
ATPAF2-210ENST00000577586 AQRO60306 1485 aaKnown RBP eCLIP29.68■■■□□ 2.34
ATPAF2-210ENST00000577586 SOGA1O94964 1423 aa29.64■■■□□ 2.34
ATPAF2-210ENST00000577586 RAD54L2Q9Y4B4 1467 aa29.61■■■□□ 2.33
ATPAF2-210ENST00000577586 WDR97A6NE52 1622 aa29.58■■■□□ 2.33
ATPAF2-210ENST00000577586 FGD5Q6ZNL6 1462 aa29.58■■■□□ 2.33
ATPAF2-210ENST00000577586 CUX1P39880 1505 aa29.57■■■□□ 2.32
ATPAF2-210ENST00000577586 RIMBP3CA6NJZ7 1639 aa29.56■■■□□ 2.32
ATPAF2-210ENST00000577586 RIMBP3BA6NNM3 1639 aa29.56■■■□□ 2.32
ATPAF2-210ENST00000577586 RIMBP3Q9UFD9 1639 aa29.56■■■□□ 2.32
ATPAF2-210ENST00000577586 SUPT5HO00267 1087 aaKnown RBP29.54■■■□□ 2.32
ATPAF2-210ENST00000577586 TDRD9Q8NDG6 1382 aaKnown RBP29.52■■■□□ 2.32
ATPAF2-210ENST00000577586 ARHGEF11O15085 1522 aa29.51■■■□□ 2.32
ATPAF2-210ENST00000577586 CHD1O14646 1710 aa29.51■■■□□ 2.31
ATPAF2-210ENST00000577586 FBLN2P98095 1184 aa29.45■■■□□ 2.31
ATPAF2-210ENST00000577586 MAGI1Q96QZ7 1491 aaPredicted RBP29.4■■■□□ 2.3
ATPAF2-210ENST00000577586 GRIN2BQ13224 1484 aa29.39■■■□□ 2.3
ATPAF2-210ENST00000577586 SNAPC4Q5SXM2 1469 aa29.39■■■□□ 2.3
ATPAF2-210ENST00000577586 CHMP7Q8WUX9 453 aaPredicted RBP29.31■■■□□ 2.28
ATPAF2-210ENST00000577586 ABCA10Q8WWZ4 1543 aa29.3■■■□□ 2.28
ATPAF2-210ENST00000577586 GAPVD1Q14C86 1478 aa29.29■■■□□ 2.28
ATPAF2-210ENST00000577586 SYNJ2O15056 1496 aa29.28■■■□□ 2.28
ATPAF2-210ENST00000577586 CYB5RLQ6IPT4 315 aa29.26■■■□□ 2.27
ATPAF2-210ENST00000577586 SYNJ1O43426 1573 aa29.25■■■□□ 2.27
ATPAF2-210ENST00000577586 CLASP1Q7Z460 1538 aa29.25■■■□□ 2.27
ATPAF2-210ENST00000577586 ARAP1Q96P48 1450 aa29.23■■■□□ 2.27
ATPAF2-210ENST00000577586 WRNQ14191 1432 aaPredicted RBP eCLIP29.21■■■□□ 2.27
ATPAF2-210ENST00000577586 PBRM1Q86U86 1689 aa29.21■■■□□ 2.27
ATPAF2-210ENST00000577586 ABCA5Q8WWZ7 1642 aa29.2■■■□□ 2.27
ATPAF2-210ENST00000577586 TOP2BQ02880 1626 aa29.16■■■□□ 2.26
ATPAF2-210ENST00000577586 BIVM-ERCC5R4GMW8 1640 aa29.15■■■□□ 2.26
ATPAF2-210ENST00000577586 GRIN2AQ12879 1464 aa28.99■■■□□ 2.23
ATPAF2-210ENST00000577586 ADAMTS12P58397 1594 aa28.97■■■□□ 2.23
ATPAF2-210ENST00000577586 FHAD1B1AJZ9 1412 aa28.94■■■□□ 2.22
ATPAF2-210ENST00000577586 ERICH3Q5RHP9 1530 aa28.94■■■□□ 2.22
ATPAF2-210ENST00000577586 NUP160Q12769 1436 aa28.92■■■□□ 2.22
ATPAF2-210ENST00000577586 TRHP20396 242 aaPredicted RBP28.89■■■□□ 2.22
ATPAF2-210ENST00000577586 CEP170Q5SW79 1584 aa28.84■■■□□ 2.21
ATPAF2-210ENST00000577586 SHROOM2Q13796 1616 aa28.75■■■□□ 2.19
ATPAF2-210ENST00000577586 ERCC6L2Q5T890 1561 aa28.71■■■□□ 2.19
ATPAF2-210ENST00000577586 KIF27Q86VH2 1401 aa28.62■■■□□ 2.17
ATPAF2-210ENST00000577586 JPH4Q96JJ6 628 aa28.6■■■□□ 2.17
ATPAF2-210ENST00000577586 IGF1RP08069 1367 aa28.59■■■□□ 2.17
ATPAF2-210ENST00000577586 PRG4Q92954 1404 aaPredicted RBP28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms