RNA–Protein interactions for RNA: ENST00000577535.1

TNFAIP1-203, Transcript of TNF alpha induced protein 1, humanhuman

TSL 3

Gene TNFAIP1, Length 482 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-203ENST00000577535 NISCHQ9Y2I1 1504 aa29.76■■■□□ 2.35
TNFAIP1-203ENST00000577535 CCDC180Q9P1Z9 1646 aa26.5■■□□□ 1.83
TNFAIP1-203ENST00000577535 ABCC9O60706 1549 aa26.26■■□□□ 1.79
TNFAIP1-203ENST00000577535 RB1CC1Q8TDY2 1594 aa25.14■■□□□ 1.61
TNFAIP1-203ENST00000577535 DCAF8L2P0C7V8 631 aa25.09■■□□□ 1.61
TNFAIP1-203ENST00000577535 NACADO15069 1562 aa25.05■■□□□ 1.6
TNFAIP1-203ENST00000577535 MYO15BQ96JP2 1530 aa24.82■■□□□ 1.56
TNFAIP1-203ENST00000577535 ZCCHC6Q5VYS8 1495 aaKnown RBP24.7■■□□□ 1.55
TNFAIP1-203ENST00000577535 DCAF1Q9Y4B6 1507 aa24.61■■□□□ 1.53
TNFAIP1-203ENST00000577535 PABPN1Q86U42 306 aaKnown RBP eCLIP24.55■■□□□ 1.52
TNFAIP1-203ENST00000577535 UNC13AQ9UPW8 1703 aa24.43■■□□□ 1.5
TNFAIP1-203ENST00000577535 DNAJC5BQ9UF47 199 aa24.39■■□□□ 1.49
TNFAIP1-203ENST00000577535 BICRAQ9NZM4 1560 aa24.34■■□□□ 1.49
TNFAIP1-203ENST00000577535 SCRIBQ14160 1630 aa24.17■■□□□ 1.46
TNFAIP1-203ENST00000577535 SHROOM4Q9ULL8 1493 aa24.12■■□□□ 1.45
TNFAIP1-203ENST00000577535 EIF4G1Q04637 1599 aaKnown RBP23.74■■□□□ 1.39
TNFAIP1-203ENST00000577535 CC2D2AQ9P2K1 1620 aa23.7■■□□□ 1.39
TNFAIP1-203ENST00000577535 CECR2Q9BXF3 1484 aa23.64■■□□□ 1.38
TNFAIP1-203ENST00000577535 NCAPD3P42695 1498 aa23.16■■□□□ 1.3
TNFAIP1-203ENST00000577535 SMARCA4P51532 1647 aa23.1■■□□□ 1.29
TNFAIP1-203ENST00000577535 ATAD2BQ9ULI0 1458 aa23.1■■□□□ 1.29
TNFAIP1-203ENST00000577535 BAZ1AQ9NRL2 1556 aaPredicted RBP23.08■■□□□ 1.29
TNFAIP1-203ENST00000577535 SMARCA2P51531 1590 aa23.05■■□□□ 1.28
TNFAIP1-203ENST00000577535 HMGXB3Q12766 1538 aa22.96■■□□□ 1.27
TNFAIP1-203ENST00000577535 MROH2BQ7Z745 1585 aa22.91■■□□□ 1.26
TNFAIP1-203ENST00000577535 PEG3Q9GZU2 1588 aa22.9■■□□□ 1.26
TNFAIP1-203ENST00000577535 BAZ1BQ9UIG0 1483 aaKnown RBP22.89■■□□□ 1.25
TNFAIP1-203ENST00000577535 ERCC6Q03468 1493 aa22.68■■□□□ 1.22
TNFAIP1-203ENST00000577535 NESP48681 1621 aa22.63■■□□□ 1.21
TNFAIP1-203ENST00000577535 WIZO95785 1651 aa22.62■■□□□ 1.21
TNFAIP1-203ENST00000577535 RSF1Q96T23 1441 aaPredicted RBP22.59■■□□□ 1.21
TNFAIP1-203ENST00000577535 LAMC3Q9Y6N6 1575 aa22.54■■□□□ 1.2
TNFAIP1-203ENST00000577535 CUX2O14529 1486 aa22.53■■□□□ 1.2
TNFAIP1-203ENST00000577535 CADPSQ9ULU8 1353 aa22.48■■□□□ 1.19
TNFAIP1-203ENST00000577535 PDS5BQ9NTI5 1447 aa22.47■■□□□ 1.19
TNFAIP1-203ENST00000577535 TOP2AP11388 1531 aaKnown RBP22.39■■□□□ 1.17
TNFAIP1-203ENST00000577535 THOC2Q8NI27 1593 aaKnown RBP22.29■■□□□ 1.16
TNFAIP1-203ENST00000577535 KIF21AQ7Z4S6 1674 aa22.28■■□□□ 1.16
TNFAIP1-203ENST00000577535 CFTRP13569 1480 aa22.26■■□□□ 1.15
TNFAIP1-203ENST00000577535 DNAJC5Q9H3Z4 198 aa22.23■■□□□ 1.15
TNFAIP1-203ENST00000577535 MRC2Q9UBG0 1479 aa22.2■■□□□ 1.14
TNFAIP1-203ENST00000577535 FANCD2Q9BXW9 1451 aa22.18■■□□□ 1.14
TNFAIP1-203ENST00000577535 CEP164Q9UPV0 1460 aa22.17■■□□□ 1.14
TNFAIP1-203ENST00000577535 CCDC88BA6NC98 1476 aa22.16■■□□□ 1.14
TNFAIP1-203ENST00000577535 WDR62O43379 1518 aa22.11■■□□□ 1.13
TNFAIP1-203ENST00000577535 URB2Q14146 1524 aaKnown RBP21.96■■□□□ 1.11
TNFAIP1-203ENST00000577535 PRDM2Q13029 1718 aa21.92■■□□□ 1.1
TNFAIP1-203ENST00000577535 SUPT5HO00267 1087 aaKnown RBP21.88■■□□□ 1.09
TNFAIP1-203ENST00000577535 ABCC8Q09428 1581 aa21.82■■□□□ 1.08
TNFAIP1-203ENST00000577535 TOPBP1Q92547 1522 aa21.78■■□□□ 1.08
TNFAIP1-203ENST00000577535 IFT140Q96RY7 1462 aa21.74■■□□□ 1.07
TNFAIP1-203ENST00000577535 DNMBPQ6XZF7 1577 aa21.71■■□□□ 1.07
TNFAIP1-203ENST00000577535 OSCARQ8IYS5 282 aa21.64■■□□□ 1.05
TNFAIP1-203ENST00000577535 ZNF608Q9ULD9 1512 aaPredicted RBP21.64■■□□□ 1.05
TNFAIP1-203ENST00000577535 POLA1P09884 1462 aaPredicted RBP21.58■■□□□ 1.05
TNFAIP1-203ENST00000577535 SOGA1O94964 1423 aa21.55■■□□□ 1.04
TNFAIP1-203ENST00000577535 TARBP1Q13395 1621 aaKnown RBP21.53■■□□□ 1.04
TNFAIP1-203ENST00000577535 AQRO60306 1485 aaKnown RBP eCLIP21.52■■□□□ 1.03
TNFAIP1-203ENST00000577535 RAD54L2Q9Y4B4 1467 aa21.5■■□□□ 1.03
TNFAIP1-203ENST00000577535 CUX1P39880 1505 aa21.5■■□□□ 1.03
TNFAIP1-203ENST00000577535 EIF4G3O43432 1585 aaKnown RBP21.49■■□□□ 1.03
TNFAIP1-203ENST00000577535 FGD5Q6ZNL6 1462 aa21.49■■□□□ 1.03
TNFAIP1-203ENST00000577535 TDRD9Q8NDG6 1382 aaKnown RBP21.45■■□□□ 1.02
TNFAIP1-203ENST00000577535 FBLN2P98095 1184 aa21.37■■□□□ 1.01
TNFAIP1-203ENST00000577535 WDR97A6NE52 1622 aa21.37■■□□□ 1.01
TNFAIP1-203ENST00000577535 TRIM41Q8WV44 630 aa21.36■■□□□ 1.01
TNFAIP1-203ENST00000577535 WRNQ14191 1432 aaPredicted RBP eCLIP21.31■■□□□ 1
TNFAIP1-203ENST00000577535 GRIN2BQ13224 1484 aa21.3■■□□□ 1
TNFAIP1-203ENST00000577535 CHMP7Q8WUX9 453 aaPredicted RBP21.28■■□□□ 1
TNFAIP1-203ENST00000577535 ABCA10Q8WWZ4 1543 aa21.28■■□□□ 1
TNFAIP1-203ENST00000577535 SNAPC4Q5SXM2 1469 aa21.27■■□□□ 1
TNFAIP1-203ENST00000577535 GAPVD1Q14C86 1478 aa21.26■□□□□ 0.99
TNFAIP1-203ENST00000577535 MAGI1Q96QZ7 1491 aaPredicted RBP21.26■□□□□ 0.99
TNFAIP1-203ENST00000577535 TOP2BQ02880 1626 aa21.24■□□□□ 0.99
TNFAIP1-203ENST00000577535 CHD1O14646 1710 aa21.24■□□□□ 0.99
TNFAIP1-203ENST00000577535 BIVM-ERCC5R4GMW8 1640 aa21.21■□□□□ 0.99
TNFAIP1-203ENST00000577535 SYNJ1O43426 1573 aa21.2■□□□□ 0.98
TNFAIP1-203ENST00000577535 SYNJ2O15056 1496 aa21.19■□□□□ 0.98
TNFAIP1-203ENST00000577535 ARHGEF11O15085 1522 aa21.18■□□□□ 0.98
TNFAIP1-203ENST00000577535 RIMBP3CA6NJZ7 1639 aa21.17■□□□□ 0.98
TNFAIP1-203ENST00000577535 RIMBP3BA6NNM3 1639 aa21.17■□□□□ 0.98
TNFAIP1-203ENST00000577535 RIMBP3Q9UFD9 1639 aa21.17■□□□□ 0.98
TNFAIP1-203ENST00000577535 ABCA5Q8WWZ7 1642 aa21.16■□□□□ 0.98
TNFAIP1-203ENST00000577535 PBRM1Q86U86 1689 aa21.12■□□□□ 0.97
TNFAIP1-203ENST00000577535 CYB5RLQ6IPT4 315 aa21.09■□□□□ 0.97
TNFAIP1-203ENST00000577535 CLASP1Q7Z460 1538 aa21.06■□□□□ 0.96
TNFAIP1-203ENST00000577535 ERICH3Q5RHP9 1530 aa21.02■□□□□ 0.96
TNFAIP1-203ENST00000577535 FHAD1B1AJZ9 1412 aa21.02■□□□□ 0.96
TNFAIP1-203ENST00000577535 GRIN2AQ12879 1464 aa21.01■□□□□ 0.95
TNFAIP1-203ENST00000577535 ARAP1Q96P48 1450 aa20.98■□□□□ 0.95
TNFAIP1-203ENST00000577535 ADAMTS12P58397 1594 aa20.97■□□□□ 0.95
TNFAIP1-203ENST00000577535 NUP160Q12769 1436 aa20.93■□□□□ 0.94
TNFAIP1-203ENST00000577535 KIF27Q86VH2 1401 aa20.91■□□□□ 0.94
TNFAIP1-203ENST00000577535 IGF1RP08069 1367 aa20.87■□□□□ 0.93
TNFAIP1-203ENST00000577535 CEP170Q5SW79 1584 aa20.87■□□□□ 0.93
TNFAIP1-203ENST00000577535 JPH4Q96JJ6 628 aa20.79■□□□□ 0.92
TNFAIP1-203ENST00000577535 TRHP20396 242 aaPredicted RBP20.77■□□□□ 0.92
TNFAIP1-203ENST00000577535 SHROOM2Q13796 1616 aa20.75■□□□□ 0.91
TNFAIP1-203ENST00000577535 CUL7Q14999 1698 aa20.73■□□□□ 0.91
TNFAIP1-203ENST00000577535 CARMIL1Q5VZK9 1371 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms