RNA–Protein interactions for RNA: ENST00000577486.1

THRA-206, Transcript of thyroid hormone receptor alpha, humanhuman

TSL 4

Gene THRA, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THRA-206ENST00000577486 NISCHQ9Y2I1 1504 aa62.14■■■■■ 7.54
THRA-206ENST00000577486 CCDC180Q9P1Z9 1646 aa55.43■■■■■ 6.46
THRA-206ENST00000577486 ABCC9O60706 1549 aa55.02■■■■■ 6.4
THRA-206ENST00000577486 RB1CC1Q8TDY2 1594 aa52.56■■■■■ 6
THRA-206ENST00000577486 DCAF8L2P0C7V8 631 aa52.44■■■■■ 5.99
THRA-206ENST00000577486 NACADO15069 1562 aa52.33■■■■■ 5.97
THRA-206ENST00000577486 MYO15BQ96JP2 1530 aa51.76■■■■■ 5.88
THRA-206ENST00000577486 ZCCHC6Q5VYS8 1495 aaKnown RBP51.61■■■■■ 5.85
THRA-206ENST00000577486 PABPN1Q86U42 306 aaKnown RBP eCLIP51.38■■■■■ 5.82
THRA-206ENST00000577486 DCAF1Q9Y4B6 1507 aa51.32■■■■■ 5.81
THRA-206ENST00000577486 UNC13AQ9UPW8 1703 aa51.26■■■■■ 5.8
THRA-206ENST00000577486 DNAJC5BQ9UF47 199 aa51.08■■■■■ 5.77
THRA-206ENST00000577486 BICRAQ9NZM4 1560 aa50.95■■■■■ 5.75
THRA-206ENST00000577486 SCRIBQ14160 1630 aa50.65■■■■■ 5.7
THRA-206ENST00000577486 SHROOM4Q9ULL8 1493 aa50.33■■■■■ 5.65
THRA-206ENST00000577486 EIF4G1Q04637 1599 aaKnown RBP49.7■■■■■ 5.55
THRA-206ENST00000577486 CC2D2AQ9P2K1 1620 aa49.67■■■■■ 5.54
THRA-206ENST00000577486 CECR2Q9BXF3 1484 aa49.49■■■■■ 5.51
THRA-206ENST00000577486 SMARCA4P51532 1647 aa48.33■■■■■ 5.33
THRA-206ENST00000577486 NCAPD3P42695 1498 aa48.33■■■■■ 5.33
THRA-206ENST00000577486 ATAD2BQ9ULI0 1458 aa48.27■■■■■ 5.32
THRA-206ENST00000577486 BAZ1AQ9NRL2 1556 aaPredicted RBP48.22■■■■■ 5.31
THRA-206ENST00000577486 SMARCA2P51531 1590 aa48.16■■■■■ 5.3
THRA-206ENST00000577486 HMGXB3Q12766 1538 aa47.98■■■■■ 5.27
THRA-206ENST00000577486 MROH2BQ7Z745 1585 aa47.91■■■■■ 5.26
THRA-206ENST00000577486 BAZ1BQ9UIG0 1483 aaKnown RBP47.86■■■■■ 5.25
THRA-206ENST00000577486 PEG3Q9GZU2 1588 aa47.81■■■■■ 5.24
THRA-206ENST00000577486 ERCC6Q03468 1493 aa47.49■■■■■ 5.19
THRA-206ENST00000577486 NESP48681 1621 aa47.4■■■■■ 5.18
THRA-206ENST00000577486 WIZO95785 1651 aa47.35■■■■■ 5.17
THRA-206ENST00000577486 RSF1Q96T23 1441 aaPredicted RBP47.14■■■■■ 5.14
THRA-206ENST00000577486 CUX2O14529 1486 aa47.13■■■■■ 5.13
THRA-206ENST00000577486 LAMC3Q9Y6N6 1575 aa47.12■■■■■ 5.13
THRA-206ENST00000577486 CADPSQ9ULU8 1353 aa46.93■■■■■ 5.1
THRA-206ENST00000577486 PDS5BQ9NTI5 1447 aa46.9■■■■■ 5.1
THRA-206ENST00000577486 TOP2AP11388 1531 aaKnown RBP46.79■■■■■ 5.08
THRA-206ENST00000577486 KIF21AQ7Z4S6 1674 aa46.73■■■■■ 5.07
THRA-206ENST00000577486 THOC2Q8NI27 1593 aaKnown RBP46.73■■■■■ 5.07
THRA-206ENST00000577486 DNAJC5Q9H3Z4 198 aa46.49■■■■■ 5.03
THRA-206ENST00000577486 CFTRP13569 1480 aa46.47■■■■■ 5.03
THRA-206ENST00000577486 MRC2Q9UBG0 1479 aa46.44■■■■■ 5.02
THRA-206ENST00000577486 FANCD2Q9BXW9 1451 aa46.38■■■■■ 5.02
THRA-206ENST00000577486 CEP164Q9UPV0 1460 aa46.38■■■■■ 5.02
THRA-206ENST00000577486 CCDC88BA6NC98 1476 aa46.3■■■■■ 5
THRA-206ENST00000577486 WDR62O43379 1518 aa46.26■■■■■ 5
THRA-206ENST00000577486 PRDM2Q13029 1718 aa45.94■■■■■ 4.94
THRA-206ENST00000577486 URB2Q14146 1524 aaKnown RBP45.93■■■■■ 4.94
THRA-206ENST00000577486 SUPT5HO00267 1087 aaKnown RBP45.66■■■■■ 4.9
THRA-206ENST00000577486 TOPBP1Q92547 1522 aa45.55■■■■■ 4.88
THRA-206ENST00000577486 ABCC8Q09428 1581 aa45.5■■■■■ 4.87
THRA-206ENST00000577486 IFT140Q96RY7 1462 aa45.43■■■■■ 4.86
THRA-206ENST00000577486 DNMBPQ6XZF7 1577 aa45.41■■■■■ 4.86
THRA-206ENST00000577486 ZNF608Q9ULD9 1512 aaPredicted RBP45.29■■■■■ 4.84
THRA-206ENST00000577486 OSCARQ8IYS5 282 aa45.18■■■■■ 4.82
THRA-206ENST00000577486 POLA1P09884 1462 aaPredicted RBP45.12■■■■■ 4.81
THRA-206ENST00000577486 TARBP1Q13395 1621 aaKnown RBP45.04■■■■■ 4.8
THRA-206ENST00000577486 EIF4G3O43432 1585 aaKnown RBP45.03■■■■■ 4.8
THRA-206ENST00000577486 SOGA1O94964 1423 aa45■■■■■ 4.79
THRA-206ENST00000577486 AQRO60306 1485 aaKnown RBP eCLIP44.99■■■■■ 4.792e-6■■■■□ 25.7
THRA-206ENST00000577486 RAD54L2Q9Y4B4 1467 aa44.99■■■■■ 4.79
THRA-206ENST00000577486 CUX1P39880 1505 aa44.96■■■■■ 4.79
THRA-206ENST00000577486 FGD5Q6ZNL6 1462 aa44.95■■■■■ 4.79
THRA-206ENST00000577486 TDRD9Q8NDG6 1382 aaKnown RBP44.83■■■■■ 4.77
THRA-206ENST00000577486 TRIM41Q8WV44 630 aa44.8■■■■■ 4.76
THRA-206ENST00000577486 FBLN2P98095 1184 aa44.7■■■■■ 4.75
THRA-206ENST00000577486 WDR97A6NE52 1622 aa44.62■■■■■ 4.73
THRA-206ENST00000577486 CHD1O14646 1710 aa44.56■■■■■ 4.72
THRA-206ENST00000577486 SNAPC4Q5SXM2 1469 aa44.53■■■■■ 4.72
THRA-206ENST00000577486 WRNQ14191 1432 aaPredicted RBP eCLIP44.5■■■■■ 4.71
THRA-206ENST00000577486 GRIN2BQ13224 1484 aa44.5■■■■■ 4.71
THRA-206ENST00000577486 ABCA10Q8WWZ4 1543 aa44.45■■■■■ 4.71
THRA-206ENST00000577486 CHMP7Q8WUX9 453 aaPredicted RBP44.43■■■■■ 4.7
THRA-206ENST00000577486 GAPVD1Q14C86 1478 aa44.42■■■■■ 4.7
THRA-206ENST00000577486 MAGI1Q96QZ7 1491 aaPredicted RBP44.41■■■■■ 4.7
THRA-206ENST00000577486 RIMBP3CA6NJZ7 1639 aa44.41■■■■■ 4.7
THRA-206ENST00000577486 RIMBP3BA6NNM3 1639 aa44.41■■■■■ 4.7
THRA-206ENST00000577486 RIMBP3Q9UFD9 1639 aa44.41■■■■■ 4.7
THRA-206ENST00000577486 TOP2BQ02880 1626 aa44.39■■■■■ 4.7
THRA-206ENST00000577486 BIVM-ERCC5R4GMW8 1640 aa44.36■■■■■ 4.69
THRA-206ENST00000577486 SYNJ1O43426 1573 aa44.36■■■■■ 4.69
THRA-206ENST00000577486 ARHGEF11O15085 1522 aa44.35■■■■■ 4.69
THRA-206ENST00000577486 PBRM1Q86U86 1689 aa44.28■■■■■ 4.68
THRA-206ENST00000577486 ABCA5Q8WWZ7 1642 aa44.28■■■■■ 4.68
THRA-206ENST00000577486 SYNJ2O15056 1496 aa44.27■■■■■ 4.68
THRA-206ENST00000577486 CYB5RLQ6IPT4 315 aa44.11■■■■■ 4.65
THRA-206ENST00000577486 CLASP1Q7Z460 1538 aa44.08■■■■■ 4.65
THRA-206ENST00000577486 ARAP1Q96P48 1450 aa43.96■■■■■ 4.63
THRA-206ENST00000577486 ADAMTS12P58397 1594 aa43.92■■■■■ 4.62
THRA-206ENST00000577486 GRIN2AQ12879 1464 aa43.91■■■■■ 4.62
THRA-206ENST00000577486 FHAD1B1AJZ9 1412 aa43.89■■■■■ 4.62
THRA-206ENST00000577486 ERICH3Q5RHP9 1530 aa43.89■■■■■ 4.62
THRA-206ENST00000577486 NUP160Q12769 1436 aa43.72■■■■■ 4.59
THRA-206ENST00000577486 CEP170Q5SW79 1584 aa43.71■■■■■ 4.59
THRA-206ENST00000577486 KIF27Q86VH2 1401 aa43.63■■■■■ 4.57
THRA-206ENST00000577486 IGF1RP08069 1367 aa43.52■■■■■ 4.56
THRA-206ENST00000577486 TRHP20396 242 aaPredicted RBP43.48■■■■■ 4.55
THRA-206ENST00000577486 ERCC6L2Q5T890 1561 aa43.46■■■■■ 4.55
THRA-206ENST00000577486 SHROOM2Q13796 1616 aa43.4■■■■■ 4.54
THRA-206ENST00000577486 JPH4Q96JJ6 628 aa43.38■■■■■ 4.53
THRA-206ENST00000577486 CUL7Q14999 1698 aa43.35■■■■■ 4.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms