RNA–Protein interactions for RNA: ENST00000577424.1

PER1-204, Transcript of period circadian regulator 1, humanhuman

TSL 3

Gene PER1, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PER1-204ENST00000577424 NISCHQ9Y2I1 1504 aa33.47■■■□□ 2.95
PER1-204ENST00000577424 CCDC180Q9P1Z9 1646 aa30.08■■■□□ 2.41
PER1-204ENST00000577424 ABCC9O60706 1549 aa29.67■■■□□ 2.34
PER1-204ENST00000577424 RB1CC1Q8TDY2 1594 aa28.44■■■□□ 2.14
PER1-204ENST00000577424 NACADO15069 1562 aa28.31■■■□□ 2.12
PER1-204ENST00000577424 MYO15BQ96JP2 1530 aa28.05■■■□□ 2.08
PER1-204ENST00000577424 UNC13AQ9UPW8 1703 aa27.92■■■□□ 2.06
PER1-204ENST00000577424 DCAF8L2P0C7V8 631 aa27.83■■■□□ 2.05
PER1-204ENST00000577424 ZCCHC6Q5VYS8 1495 aaKnown RBP27.83■■■□□ 2.04
PER1-204ENST00000577424 DCAF1Q9Y4B6 1507 aa27.74■■■□□ 2.03
PER1-204ENST00000577424 BICRAQ9NZM4 1560 aa27.65■■■□□ 2.02
PER1-204ENST00000577424 DNAJC5BQ9UF47 199 aa27.64■■■□□ 2.02
PER1-204ENST00000577424 PABPN1Q86U42 306 aaKnown RBP eCLIP27.55■■■□□ 2
PER1-204ENST00000577424 SHROOM4Q9ULL8 1493 aa27.34■■□□□ 1.97
PER1-204ENST00000577424 SCRIBQ14160 1630 aa27.27■■□□□ 1.96
PER1-204ENST00000577424 EIF4G1Q04637 1599 aaKnown RBP26.92■■□□□ 1.9
PER1-204ENST00000577424 CC2D2AQ9P2K1 1620 aa26.91■■□□□ 1.9
PER1-204ENST00000577424 CECR2Q9BXF3 1484 aa26.74■■□□□ 1.87
PER1-204ENST00000577424 SMARCA4P51532 1647 aa26.11■■□□□ 1.77
PER1-204ENST00000577424 NCAPD3P42695 1498 aa26.1■■□□□ 1.77
PER1-204ENST00000577424 ATAD2BQ9ULI0 1458 aa26.03■■□□□ 1.76
PER1-204ENST00000577424 SMARCA2P51531 1590 aa25.99■■□□□ 1.75
PER1-204ENST00000577424 HMGXB3Q12766 1538 aa25.98■■□□□ 1.75
PER1-204ENST00000577424 BAZ1AQ9NRL2 1556 aaPredicted RBP25.97■■□□□ 1.75
PER1-204ENST00000577424 PEG3Q9GZU2 1588 aa25.91■■□□□ 1.74
PER1-204ENST00000577424 MROH2BQ7Z745 1585 aa25.77■■□□□ 1.72
PER1-204ENST00000577424 BAZ1BQ9UIG0 1483 aaKnown RBP25.76■■□□□ 1.71
PER1-204ENST00000577424 CUX2O14529 1486 aa25.6■■□□□ 1.69
PER1-204ENST00000577424 ERCC6Q03468 1493 aa25.59■■□□□ 1.69
PER1-204ENST00000577424 NESP48681 1621 aa25.58■■□□□ 1.69
PER1-204ENST00000577424 LAMC3Q9Y6N6 1575 aa25.52■■□□□ 1.68
PER1-204ENST00000577424 WIZO95785 1651 aa25.49■■□□□ 1.67
PER1-204ENST00000577424 THOC2Q8NI27 1593 aaKnown RBP25.42■■□□□ 1.66
PER1-204ENST00000577424 KIF21AQ7Z4S6 1674 aa25.37■■□□□ 1.65
PER1-204ENST00000577424 RSF1Q96T23 1441 aaPredicted RBP25.27■■□□□ 1.64
PER1-204ENST00000577424 PDS5BQ9NTI5 1447 aa25.26■■□□□ 1.63
PER1-204ENST00000577424 DNAJC5Q9H3Z4 198 aa25.25■■□□□ 1.63
PER1-204ENST00000577424 CADPSQ9ULU8 1353 aa25.25■■□□□ 1.63
PER1-204ENST00000577424 TOP2AP11388 1531 aaKnown RBP25.21■■□□□ 1.63
PER1-204ENST00000577424 MRC2Q9UBG0 1479 aa25.09■■□□□ 1.61
PER1-204ENST00000577424 WDR62O43379 1518 aa25.07■■□□□ 1.6
PER1-204ENST00000577424 CFTRP13569 1480 aa25.06■■□□□ 1.6
PER1-204ENST00000577424 PRDM2Q13029 1718 aa25■■□□□ 1.59
PER1-204ENST00000577424 CEP164Q9UPV0 1460 aa25■■□□□ 1.59
PER1-204ENST00000577424 FANCD2Q9BXW9 1451 aa24.98■■□□□ 1.59
PER1-204ENST00000577424 CCDC88BA6NC98 1476 aa24.84■■□□□ 1.57
PER1-204ENST00000577424 URB2Q14146 1524 aaKnown RBP24.8■■□□□ 1.56
PER1-204ENST00000577424 TOPBP1Q92547 1522 aa24.56■■□□□ 1.52
PER1-204ENST00000577424 DNMBPQ6XZF7 1577 aa24.53■■□□□ 1.52
PER1-204ENST00000577424 ABCC8Q09428 1581 aa24.52■■□□□ 1.52
PER1-204ENST00000577424 IFT140Q96RY7 1462 aa24.51■■□□□ 1.51
PER1-204ENST00000577424 ZNF608Q9ULD9 1512 aaPredicted RBP24.42■■□□□ 1.5
PER1-204ENST00000577424 TARBP1Q13395 1621 aaKnown RBP24.39■■□□□ 1.5
PER1-204ENST00000577424 EIF4G3O43432 1585 aaKnown RBP24.38■■□□□ 1.49
PER1-204ENST00000577424 POLA1P09884 1462 aaPredicted RBP24.32■■□□□ 1.48
PER1-204ENST00000577424 OSCARQ8IYS5 282 aa24.29■■□□□ 1.48
PER1-204ENST00000577424 WDR97A6NE52 1622 aa24.21■■□□□ 1.47
PER1-204ENST00000577424 CUX1P39880 1505 aa24.21■■□□□ 1.47
PER1-204ENST00000577424 CHD1O14646 1710 aa24.2■■□□□ 1.46
PER1-204ENST00000577424 AQRO60306 1485 aaKnown RBP eCLIP24.18■■□□□ 1.46
PER1-204ENST00000577424 FGD5Q6ZNL6 1462 aa24.18■■□□□ 1.46
PER1-204ENST00000577424 RAD54L2Q9Y4B4 1467 aa24.17■■□□□ 1.46
PER1-204ENST00000577424 RIMBP3CA6NJZ7 1639 aa24.13■■□□□ 1.45
PER1-204ENST00000577424 RIMBP3BA6NNM3 1639 aa24.13■■□□□ 1.45
PER1-204ENST00000577424 RIMBP3Q9UFD9 1639 aa24.13■■□□□ 1.45
PER1-204ENST00000577424 SOGA1O94964 1423 aa24.13■■□□□ 1.45
PER1-204ENST00000577424 TRIM41Q8WV44 630 aa24.09■■□□□ 1.45
PER1-204ENST00000577424 SUPT5HO00267 1087 aaKnown RBP24.07■■□□□ 1.44
PER1-204ENST00000577424 ARHGEF11O15085 1522 aa24.05■■□□□ 1.44
PER1-204ENST00000577424 TDRD9Q8NDG6 1382 aaKnown RBP24.03■■□□□ 1.44
PER1-204ENST00000577424 SNAPC4Q5SXM2 1469 aa24■■□□□ 1.43
PER1-204ENST00000577424 PBRM1Q86U86 1689 aa23.99■■□□□ 1.43
PER1-204ENST00000577424 MAGI1Q96QZ7 1491 aaPredicted RBP23.98■■□□□ 1.43
PER1-204ENST00000577424 ABCA5Q8WWZ7 1642 aa23.96■■□□□ 1.43
PER1-204ENST00000577424 BIVM-ERCC5R4GMW8 1640 aa23.96■■□□□ 1.43
PER1-204ENST00000577424 ABCA10Q8WWZ4 1543 aa23.95■■□□□ 1.43
PER1-204ENST00000577424 GRIN2BQ13224 1484 aa23.95■■□□□ 1.42
PER1-204ENST00000577424 CLASP1Q7Z460 1538 aa23.92■■□□□ 1.42
PER1-204ENST00000577424 TOP2BQ02880 1626 aa23.91■■□□□ 1.42
PER1-204ENST00000577424 GAPVD1Q14C86 1478 aa23.88■■□□□ 1.41
PER1-204ENST00000577424 SYNJ2O15056 1496 aa23.87■■□□□ 1.41
PER1-204ENST00000577424 SYNJ1O43426 1573 aa23.86■■□□□ 1.41
PER1-204ENST00000577424 ARAP1Q96P48 1450 aa23.83■■□□□ 1.41
PER1-204ENST00000577424 FBLN2P98095 1184 aa23.83■■□□□ 1.41
PER1-204ENST00000577424 WRNQ14191 1432 aaPredicted RBP eCLIP23.82■■□□□ 1.4
PER1-204ENST00000577424 ADAMTS12P58397 1594 aa23.75■■□□□ 1.39
PER1-204ENST00000577424 CHMP7Q8WUX9 453 aaPredicted RBP23.75■■□□□ 1.39
PER1-204ENST00000577424 ERICH3Q5RHP9 1530 aa23.67■■□□□ 1.38
PER1-204ENST00000577424 GRIN2AQ12879 1464 aa23.67■■□□□ 1.38
PER1-204ENST00000577424 CYB5RLQ6IPT4 315 aa23.66■■□□□ 1.38
PER1-204ENST00000577424 CEP170Q5SW79 1584 aa23.61■■□□□ 1.37
PER1-204ENST00000577424 NUP160Q12769 1436 aa23.61■■□□□ 1.37
PER1-204ENST00000577424 FHAD1B1AJZ9 1412 aa23.59■■□□□ 1.37
PER1-204ENST00000577424 SHROOM2Q13796 1616 aa23.56■■□□□ 1.36
PER1-204ENST00000577424 ERCC6L2Q5T890 1561 aa23.5■■□□□ 1.35
PER1-204ENST00000577424 RUSC2Q8N2Y8 1516 aa23.42■■□□□ 1.34
PER1-204ENST00000577424 CUL7Q14999 1698 aa23.39■■□□□ 1.34
PER1-204ENST00000577424 KIF27Q86VH2 1401 aa23.34■■□□□ 1.33
PER1-204ENST00000577424 IGF1RP08069 1367 aa23.3■■□□□ 1.32
PER1-204ENST00000577424 TRHP20396 242 aaPredicted RBP23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms