RNA–Protein interactions for RNA: ENST00000577422.5

CUEDC1-203, Transcript of CUE domain containing 1, humanhuman

TSL 3

Gene CUEDC1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-203ENST00000577422 NISCHQ9Y2I1 1504 aa34.34■■■■□ 3.09
CUEDC1-203ENST00000577422 CCDC180Q9P1Z9 1646 aa30.79■■■□□ 2.52
CUEDC1-203ENST00000577422 ABCC9O60706 1549 aa30.75■■■□□ 2.51
CUEDC1-203ENST00000577422 RB1CC1Q8TDY2 1594 aa29.26■■■□□ 2.28
CUEDC1-203ENST00000577422 NACADO15069 1562 aa29.09■■■□□ 2.25
CUEDC1-203ENST00000577422 DNAJC5BQ9UF47 199 aa28.92■■■□□ 2.22
CUEDC1-203ENST00000577422 DCAF8L2P0C7V8 631 aa28.8■■■□□ 2.2
CUEDC1-203ENST00000577422 MYO15BQ96JP2 1530 aa28.74■■■□□ 2.19
CUEDC1-203ENST00000577422 UNC13AQ9UPW8 1703 aa28.69■■■□□ 2.18
CUEDC1-203ENST00000577422 PABPN1Q86U42 306 aaKnown RBP eCLIP28.62■■■□□ 2.17
CUEDC1-203ENST00000577422 BICRAQ9NZM4 1560 aa28.54■■■□□ 2.16
CUEDC1-203ENST00000577422 ZCCHC6Q5VYS8 1495 aaKnown RBP28.48■■■□□ 2.15
CUEDC1-203ENST00000577422 DCAF1Q9Y4B6 1507 aa28.38■■■□□ 2.13
CUEDC1-203ENST00000577422 SHROOM4Q9ULL8 1493 aa28.07■■■□□ 2.08
CUEDC1-203ENST00000577422 SCRIBQ14160 1630 aa28.03■■■□□ 2.08
CUEDC1-203ENST00000577422 CC2D2AQ9P2K1 1620 aa27.81■■■□□ 2.04
CUEDC1-203ENST00000577422 EIF4G1Q04637 1599 aaKnown RBP27.77■■■□□ 2.04
CUEDC1-203ENST00000577422 CECR2Q9BXF3 1484 aa27.7■■■□□ 2.02
CUEDC1-203ENST00000577422 NCAPD3P42695 1498 aa26.89■■□□□ 1.9
CUEDC1-203ENST00000577422 ATAD2BQ9ULI0 1458 aa26.81■■□□□ 1.88
CUEDC1-203ENST00000577422 SMARCA4P51532 1647 aa26.78■■□□□ 1.88
CUEDC1-203ENST00000577422 HMGXB3Q12766 1538 aa26.69■■□□□ 1.86
CUEDC1-203ENST00000577422 SMARCA2P51531 1590 aa26.68■■□□□ 1.86
CUEDC1-203ENST00000577422 BAZ1AQ9NRL2 1556 aaPredicted RBP26.62■■□□□ 1.85
CUEDC1-203ENST00000577422 PEG3Q9GZU2 1588 aa26.56■■□□□ 1.84
CUEDC1-203ENST00000577422 CUX2O14529 1486 aa26.5■■□□□ 1.83
CUEDC1-203ENST00000577422 BAZ1BQ9UIG0 1483 aaKnown RBP26.49■■□□□ 1.83
CUEDC1-203ENST00000577422 ERCC6Q03468 1493 aa26.48■■□□□ 1.83
CUEDC1-203ENST00000577422 NESP48681 1621 aa26.47■■□□□ 1.83
CUEDC1-203ENST00000577422 MROH2BQ7Z745 1585 aa26.47■■□□□ 1.83
CUEDC1-203ENST00000577422 DNAJC5Q9H3Z4 198 aa26.47■■□□□ 1.83
CUEDC1-203ENST00000577422 LAMC3Q9Y6N6 1575 aa26.25■■□□□ 1.79
CUEDC1-203ENST00000577422 THOC2Q8NI27 1593 aaKnown RBP26.22■■□□□ 1.79
CUEDC1-203ENST00000577422 WIZO95785 1651 aa26.15■■□□□ 1.78
CUEDC1-203ENST00000577422 KIF21AQ7Z4S6 1674 aa26.12■■□□□ 1.77
CUEDC1-203ENST00000577422 PDS5BQ9NTI5 1447 aa26.05■■□□□ 1.76
CUEDC1-203ENST00000577422 CADPSQ9ULU8 1353 aa26.04■■□□□ 1.76
CUEDC1-203ENST00000577422 RSF1Q96T23 1441 aaPredicted RBP25.92■■□□□ 1.74
CUEDC1-203ENST00000577422 MRC2Q9UBG0 1479 aa25.86■■□□□ 1.73
CUEDC1-203ENST00000577422 WDR62O43379 1518 aa25.84■■□□□ 1.73
CUEDC1-203ENST00000577422 TOP2AP11388 1531 aaKnown RBP25.79■■□□□ 1.72
CUEDC1-203ENST00000577422 CFTRP13569 1480 aa25.78■■□□□ 1.72
CUEDC1-203ENST00000577422 CEP164Q9UPV0 1460 aa25.74■■□□□ 1.71
CUEDC1-203ENST00000577422 FANCD2Q9BXW9 1451 aa25.73■■□□□ 1.71
CUEDC1-203ENST00000577422 URB2Q14146 1524 aaKnown RBP25.58■■□□□ 1.68
CUEDC1-203ENST00000577422 CCDC88BA6NC98 1476 aa25.52■■□□□ 1.68
CUEDC1-203ENST00000577422 PRDM2Q13029 1718 aa25.49■■□□□ 1.67
CUEDC1-203ENST00000577422 TOPBP1Q92547 1522 aa25.27■■□□□ 1.64
CUEDC1-203ENST00000577422 ZNF608Q9ULD9 1512 aaPredicted RBP25.25■■□□□ 1.63
CUEDC1-203ENST00000577422 IFT140Q96RY7 1462 aa25.23■■□□□ 1.63
CUEDC1-203ENST00000577422 OSCARQ8IYS5 282 aa25.23■■□□□ 1.63
CUEDC1-203ENST00000577422 TRIM41Q8WV44 630 aa25.22■■□□□ 1.63
CUEDC1-203ENST00000577422 DNMBPQ6XZF7 1577 aa25.17■■□□□ 1.62
CUEDC1-203ENST00000577422 ABCC8Q09428 1581 aa25.16■■□□□ 1.62
CUEDC1-203ENST00000577422 EIF4G3O43432 1585 aaKnown RBP25.1■■□□□ 1.61
CUEDC1-203ENST00000577422 TARBP1Q13395 1621 aaKnown RBP25.09■■□□□ 1.61
CUEDC1-203ENST00000577422 POLA1P09884 1462 aaPredicted RBP25.02■■□□□ 1.6
CUEDC1-203ENST00000577422 AQRO60306 1485 aaKnown RBP eCLIP25■■□□□ 1.59
CUEDC1-203ENST00000577422 RIMBP3CA6NJZ7 1639 aa24.98■■□□□ 1.59
CUEDC1-203ENST00000577422 RIMBP3BA6NNM3 1639 aa24.98■■□□□ 1.59
CUEDC1-203ENST00000577422 RIMBP3Q9UFD9 1639 aa24.98■■□□□ 1.59
CUEDC1-203ENST00000577422 RAD54L2Q9Y4B4 1467 aa24.93■■□□□ 1.58
CUEDC1-203ENST00000577422 ARHGEF11O15085 1522 aa24.91■■□□□ 1.58
CUEDC1-203ENST00000577422 CHD1O14646 1710 aa24.89■■□□□ 1.58
CUEDC1-203ENST00000577422 CUX1P39880 1505 aa24.87■■□□□ 1.57
CUEDC1-203ENST00000577422 SOGA1O94964 1423 aa24.86■■□□□ 1.57
CUEDC1-203ENST00000577422 FGD5Q6ZNL6 1462 aa24.85■■□□□ 1.57
CUEDC1-203ENST00000577422 TDRD9Q8NDG6 1382 aaKnown RBP24.82■■□□□ 1.56
CUEDC1-203ENST00000577422 WDR97A6NE52 1622 aa24.78■■□□□ 1.56
CUEDC1-203ENST00000577422 SNAPC4Q5SXM2 1469 aa24.73■■□□□ 1.55
CUEDC1-203ENST00000577422 FBLN2P98095 1184 aa24.7■■□□□ 1.54
CUEDC1-203ENST00000577422 ARAP1Q96P48 1450 aa24.68■■□□□ 1.54
CUEDC1-203ENST00000577422 CLASP1Q7Z460 1538 aa24.66■■□□□ 1.54
CUEDC1-203ENST00000577422 MAGI1Q96QZ7 1491 aaPredicted RBP24.65■■□□□ 1.54
CUEDC1-203ENST00000577422 GRIN2BQ13224 1484 aa24.64■■□□□ 1.54
CUEDC1-203ENST00000577422 SUPT5HO00267 1087 aaKnown RBP24.64■■□□□ 1.54
CUEDC1-203ENST00000577422 CYB5RLQ6IPT4 315 aa24.64■■□□□ 1.54
CUEDC1-203ENST00000577422 ABCA10Q8WWZ4 1543 aa24.58■■□□□ 1.53
CUEDC1-203ENST00000577422 PBRM1Q86U86 1689 aa24.58■■□□□ 1.53
CUEDC1-203ENST00000577422 SYNJ2O15056 1496 aa24.58■■□□□ 1.52
CUEDC1-203ENST00000577422 ABCA5Q8WWZ7 1642 aa24.57■■□□□ 1.52
CUEDC1-203ENST00000577422 GAPVD1Q14C86 1478 aa24.57■■□□□ 1.52
CUEDC1-203ENST00000577422 SYNJ1O43426 1573 aa24.55■■□□□ 1.52
CUEDC1-203ENST00000577422 CHMP7Q8WUX9 453 aaPredicted RBP24.55■■□□□ 1.52
CUEDC1-203ENST00000577422 BIVM-ERCC5R4GMW8 1640 aa24.46■■□□□ 1.51
CUEDC1-203ENST00000577422 TOP2BQ02880 1626 aa24.46■■□□□ 1.51
CUEDC1-203ENST00000577422 WRNQ14191 1432 aaPredicted RBP eCLIP24.43■■□□□ 1.5
CUEDC1-203ENST00000577422 ADAMTS12P58397 1594 aa24.37■■□□□ 1.49
CUEDC1-203ENST00000577422 GRIN2AQ12879 1464 aa24.36■■□□□ 1.49
CUEDC1-203ENST00000577422 NUP160Q12769 1436 aa24.31■■□□□ 1.48
CUEDC1-203ENST00000577422 CEP170Q5SW79 1584 aa24.3■■□□□ 1.48
CUEDC1-203ENST00000577422 TRHP20396 242 aaPredicted RBP24.3■■□□□ 1.48
CUEDC1-203ENST00000577422 ERCC6L2Q5T890 1561 aa24.29■■□□□ 1.48
CUEDC1-203ENST00000577422 ERICH3Q5RHP9 1530 aa24.26■■□□□ 1.47
CUEDC1-203ENST00000577422 FHAD1B1AJZ9 1412 aa24.26■■□□□ 1.47
CUEDC1-203ENST00000577422 SHROOM2Q13796 1616 aa24.21■■□□□ 1.47
CUEDC1-203ENST00000577422 RUSC2Q8N2Y8 1516 aa24.03■■□□□ 1.44
CUEDC1-203ENST00000577422 PRG4Q92954 1404 aaPredicted RBP24.01■■□□□ 1.43
CUEDC1-203ENST00000577422 JPH4Q96JJ6 628 aa23.98■■□□□ 1.43
CUEDC1-203ENST00000577422 IGF1RP08069 1367 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms