RNA–Protein interactions for RNA: ENST00000577419.5

TMEM11-202, Transcript of transmembrane protein 11, humanhuman

TSL 2

Gene TMEM11, Length 1,246 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM11-202ENST00000577419 NISCHQ9Y2I1 1504 aa43.96■■■■■ 4.63
TMEM11-202ENST00000577419 CCDC180Q9P1Z9 1646 aa39.23■■■■□ 3.87
TMEM11-202ENST00000577419 ABCC9O60706 1549 aa38.58■■■■□ 3.77
TMEM11-202ENST00000577419 RB1CC1Q8TDY2 1594 aa37■■■■□ 3.51
TMEM11-202ENST00000577419 NACADO15069 1562 aa36.91■■■■□ 3.5
TMEM11-202ENST00000577419 MYO15BQ96JP2 1530 aa36.66■■■■□ 3.46
TMEM11-202ENST00000577419 DCAF8L2P0C7V8 631 aa36.62■■■■□ 3.45
TMEM11-202ENST00000577419 ZCCHC6Q5VYS8 1495 aaKnown RBP36.61■■■■□ 3.45
TMEM11-202ENST00000577419 DCAF1Q9Y4B6 1507 aa36.39■■■■□ 3.42
TMEM11-202ENST00000577419 UNC13AQ9UPW8 1703 aa36.18■■■■□ 3.38
TMEM11-202ENST00000577419 BICRAQ9NZM4 1560 aa35.97■■■■□ 3.35
TMEM11-202ENST00000577419 PABPN1Q86U42 306 aaKnown RBP eCLIP35.95■■■■□ 3.35
TMEM11-202ENST00000577419 SCRIBQ14160 1630 aa35.73■■■■□ 3.31
TMEM11-202ENST00000577419 DNAJC5BQ9UF47 199 aa35.65■■■■□ 3.3
TMEM11-202ENST00000577419 SHROOM4Q9ULL8 1493 aa35.57■■■■□ 3.28
TMEM11-202ENST00000577419 EIF4G1Q04637 1599 aaKnown RBP35■■■■□ 3.19
TMEM11-202ENST00000577419 CC2D2AQ9P2K1 1620 aa34.91■■■■□ 3.18
TMEM11-202ENST00000577419 CECR2Q9BXF3 1484 aa34.71■■■■□ 3.15
TMEM11-202ENST00000577419 SMARCA4P51532 1647 aa34.19■■■■□ 3.06
TMEM11-202ENST00000577419 BAZ1AQ9NRL2 1556 aaPredicted RBP34.08■■■■□ 3.05
TMEM11-202ENST00000577419 NCAPD3P42695 1498 aa34.07■■■■□ 3.05
TMEM11-202ENST00000577419 ATAD2BQ9ULI0 1458 aa34.06■■■■□ 3.04
TMEM11-202ENST00000577419 SMARCA2P51531 1590 aa33.99■■■■□ 3.03
TMEM11-202ENST00000577419 HMGXB3Q12766 1538 aa33.91■■■■□ 3.02
TMEM11-202ENST00000577419 MROH2BQ7Z745 1585 aa33.89■■■■□ 3.02
TMEM11-202ENST00000577419 PEG3Q9GZU2 1588 aa33.89■■■■□ 3.02
TMEM11-202ENST00000577419 BAZ1BQ9UIG0 1483 aaKnown RBP33.73■■■□□ 2.99
TMEM11-202ENST00000577419 WIZO95785 1651 aa33.48■■■□□ 2.95
TMEM11-202ENST00000577419 RSF1Q96T23 1441 aaPredicted RBP33.38■■■□□ 2.93
TMEM11-202ENST00000577419 NESP48681 1621 aa33.33■■■□□ 2.93
TMEM11-202ENST00000577419 ERCC6Q03468 1493 aa33.25■■■□□ 2.91
TMEM11-202ENST00000577419 LAMC3Q9Y6N6 1575 aa33.21■■■□□ 2.91
TMEM11-202ENST00000577419 TOP2AP11388 1531 aaKnown RBP33.14■■■□□ 2.9
TMEM11-202ENST00000577419 CUX2O14529 1486 aa33.05■■■□□ 2.88
TMEM11-202ENST00000577419 CADPSQ9ULU8 1353 aa33.03■■■□□ 2.88
TMEM11-202ENST00000577419 PDS5BQ9NTI5 1447 aa32.95■■■□□ 2.87
TMEM11-202ENST00000577419 THOC2Q8NI27 1593 aaKnown RBP32.94■■■□□ 2.86
TMEM11-202ENST00000577419 KIF21AQ7Z4S6 1674 aa32.93■■■□□ 2.86
TMEM11-202ENST00000577419 CFTRP13569 1480 aa32.82■■■□□ 2.84
TMEM11-202ENST00000577419 CCDC88BA6NC98 1476 aa32.72■■■□□ 2.83
TMEM11-202ENST00000577419 MRC2Q9UBG0 1479 aa32.67■■■□□ 2.82
TMEM11-202ENST00000577419 FANCD2Q9BXW9 1451 aa32.67■■■□□ 2.82
TMEM11-202ENST00000577419 CEP164Q9UPV0 1460 aa32.66■■■□□ 2.82
TMEM11-202ENST00000577419 WDR62O43379 1518 aa32.61■■■□□ 2.81
TMEM11-202ENST00000577419 PRDM2Q13029 1718 aa32.54■■■□□ 2.8
TMEM11-202ENST00000577419 URB2Q14146 1524 aaKnown RBP32.4■■■□□ 2.78
TMEM11-202ENST00000577419 DNAJC5Q9H3Z4 198 aa32.28■■■□□ 2.76
TMEM11-202ENST00000577419 SUPT5HO00267 1087 aaKnown RBP32.19■■■□□ 2.74
TMEM11-202ENST00000577419 TOPBP1Q92547 1522 aa32.14■■■□□ 2.74
TMEM11-202ENST00000577419 DNMBPQ6XZF7 1577 aa32.08■■■□□ 2.73
TMEM11-202ENST00000577419 ABCC8Q09428 1581 aa32.07■■■□□ 2.72
TMEM11-202ENST00000577419 IFT140Q96RY7 1462 aa31.97■■■□□ 2.71
TMEM11-202ENST00000577419 ZNF608Q9ULD9 1512 aaPredicted RBP31.88■■■□□ 2.69
TMEM11-202ENST00000577419 POLA1P09884 1462 aaPredicted RBP31.85■■■□□ 2.69
TMEM11-202ENST00000577419 TARBP1Q13395 1621 aaKnown RBP31.83■■■□□ 2.69
TMEM11-202ENST00000577419 CUX1P39880 1505 aa31.81■■■□□ 2.68
TMEM11-202ENST00000577419 EIF4G3O43432 1585 aaKnown RBP31.77■■■□□ 2.68
TMEM11-202ENST00000577419 FGD5Q6ZNL6 1462 aa31.72■■■□□ 2.67
TMEM11-202ENST00000577419 RAD54L2Q9Y4B4 1467 aa31.69■■■□□ 2.66
TMEM11-202ENST00000577419 SOGA1O94964 1423 aa31.65■■■□□ 2.66
TMEM11-202ENST00000577419 AQRO60306 1485 aaKnown RBP eCLIP31.62■■■□□ 2.65
TMEM11-202ENST00000577419 WDR97A6NE52 1622 aa31.56■■■□□ 2.64
TMEM11-202ENST00000577419 OSCARQ8IYS5 282 aa31.51■■■□□ 2.63
TMEM11-202ENST00000577419 TDRD9Q8NDG6 1382 aaKnown RBP31.51■■■□□ 2.63
TMEM11-202ENST00000577419 BIVM-ERCC5R4GMW8 1640 aa31.46■■■□□ 2.63
TMEM11-202ENST00000577419 WRNQ14191 1432 aaPredicted RBP eCLIP31.46■■■□□ 2.63
TMEM11-202ENST00000577419 TOP2BQ02880 1626 aa31.46■■■□□ 2.63
TMEM11-202ENST00000577419 SYNJ1O43426 1573 aa31.45■■■□□ 2.63
TMEM11-202ENST00000577419 ABCA10Q8WWZ4 1543 aa31.41■■■□□ 2.62
TMEM11-202ENST00000577419 CHD1O14646 1710 aa31.38■■■□□ 2.61
TMEM11-202ENST00000577419 SNAPC4Q5SXM2 1469 aa31.36■■■□□ 2.61
TMEM11-202ENST00000577419 ABCA5Q8WWZ7 1642 aa31.35■■■□□ 2.61
TMEM11-202ENST00000577419 GRIN2BQ13224 1484 aa31.35■■■□□ 2.61
TMEM11-202ENST00000577419 MAGI1Q96QZ7 1491 aaPredicted RBP31.32■■■□□ 2.6
TMEM11-202ENST00000577419 GAPVD1Q14C86 1478 aa31.31■■■□□ 2.6
TMEM11-202ENST00000577419 PBRM1Q86U86 1689 aa31.28■■■□□ 2.6
TMEM11-202ENST00000577419 FBLN2P98095 1184 aa31.19■■■□□ 2.58
TMEM11-202ENST00000577419 SYNJ2O15056 1496 aa31.19■■■□□ 2.58
TMEM11-202ENST00000577419 RIMBP3CA6NJZ7 1639 aa31.15■■■□□ 2.58
TMEM11-202ENST00000577419 RIMBP3BA6NNM3 1639 aa31.15■■■□□ 2.58
TMEM11-202ENST00000577419 RIMBP3Q9UFD9 1639 aa31.15■■■□□ 2.58
TMEM11-202ENST00000577419 ARHGEF11O15085 1522 aa31.13■■■□□ 2.57
TMEM11-202ENST00000577419 CLASP1Q7Z460 1538 aa31.09■■■□□ 2.57
TMEM11-202ENST00000577419 CHMP7Q8WUX9 453 aaPredicted RBP31.08■■■□□ 2.57
TMEM11-202ENST00000577419 ADAMTS12P58397 1594 aa31.06■■■□□ 2.56
TMEM11-202ENST00000577419 TRIM41Q8WV44 630 aa31.04■■■□□ 2.56
TMEM11-202ENST00000577419 ERICH3Q5RHP9 1530 aa31.03■■■□□ 2.56
TMEM11-202ENST00000577419 GRIN2AQ12879 1464 aa30.97■■■□□ 2.55
TMEM11-202ENST00000577419 FHAD1B1AJZ9 1412 aa30.94■■■□□ 2.54
TMEM11-202ENST00000577419 ARAP1Q96P48 1450 aa30.88■■■□□ 2.53
TMEM11-202ENST00000577419 NUP160Q12769 1436 aa30.87■■■□□ 2.53
TMEM11-202ENST00000577419 CEP170Q5SW79 1584 aa30.84■■■□□ 2.53
TMEM11-202ENST00000577419 KIF27Q86VH2 1401 aa30.81■■■□□ 2.52
TMEM11-202ENST00000577419 CYB5RLQ6IPT4 315 aa30.73■■■□□ 2.51
TMEM11-202ENST00000577419 IGF1RP08069 1367 aa30.72■■■□□ 2.51
TMEM11-202ENST00000577419 CUL7Q14999 1698 aa30.68■■■□□ 2.5
TMEM11-202ENST00000577419 SHROOM2Q13796 1616 aa30.68■■■□□ 2.5
TMEM11-202ENST00000577419 RUSC2Q8N2Y8 1516 aa30.63■■■□□ 2.49
TMEM11-202ENST00000577419 ERCC6L2Q5T890 1561 aa30.62■■■□□ 2.49
TMEM11-202ENST00000577419 CARMIL1Q5VZK9 1371 aa30.51■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms