RNA–Protein interactions for RNA: ENST00000577000.1

LINC00482-202, long intergenic non-protein coding RNA 482, humanhuman

TSL 3

Gene LINC00482, Length 461 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00482-202ENST00000577000 NISCHQ9Y2I1 1504 aa34.7■■■■□ 3.14
LINC00482-202ENST00000577000 ABCC9O60706 1549 aa31.87■■■□□ 2.69
LINC00482-202ENST00000577000 CCDC180Q9P1Z9 1646 aa31.47■■■□□ 2.63
LINC00482-202ENST00000577000 DNAJC5BQ9UF47 199 aa30.3■■■□□ 2.44
LINC00482-202ENST00000577000 RB1CC1Q8TDY2 1594 aa30.19■■■□□ 2.42
LINC00482-202ENST00000577000 NACADO15069 1562 aa29.85■■■□□ 2.37
LINC00482-202ENST00000577000 PABPN1Q86U42 306 aaKnown RBP eCLIP29.53■■■□□ 2.32
LINC00482-202ENST00000577000 UNC13AQ9UPW8 1703 aa29.53■■■□□ 2.32
LINC00482-202ENST00000577000 DCAF8L2P0C7V8 631 aa29.47■■■□□ 2.31
LINC00482-202ENST00000577000 BICRAQ9NZM4 1560 aa29.26■■■□□ 2.28
LINC00482-202ENST00000577000 MYO15BQ96JP2 1530 aa29.25■■■□□ 2.27
LINC00482-202ENST00000577000 SHROOM4Q9ULL8 1493 aa28.91■■■□□ 2.22
LINC00482-202ENST00000577000 CC2D2AQ9P2K1 1620 aa28.81■■■□□ 2.2
LINC00482-202ENST00000577000 CECR2Q9BXF3 1484 aa28.79■■■□□ 2.2
LINC00482-202ENST00000577000 DCAF1Q9Y4B6 1507 aa28.67■■■□□ 2.18
LINC00482-202ENST00000577000 ZCCHC6Q5VYS8 1495 aaKnown RBP28.63■■■□□ 2.17
LINC00482-202ENST00000577000 EIF4G1Q04637 1599 aaKnown RBP28.61■■■□□ 2.17
LINC00482-202ENST00000577000 SCRIBQ14160 1630 aa28.55■■■□□ 2.16
LINC00482-202ENST00000577000 DNAJC5Q9H3Z4 198 aa28.31■■■□□ 2.12
LINC00482-202ENST00000577000 CUX2O14529 1486 aa27.76■■■□□ 2.04
LINC00482-202ENST00000577000 ERCC6Q03468 1493 aa27.61■■■□□ 2.01
LINC00482-202ENST00000577000 NCAPD3P42695 1498 aa27.51■■■□□ 2
LINC00482-202ENST00000577000 ATAD2BQ9ULI0 1458 aa27.33■■□□□ 1.97
LINC00482-202ENST00000577000 HMGXB3Q12766 1538 aa27.3■■□□□ 1.96
LINC00482-202ENST00000577000 SMARCA2P51531 1590 aa27.29■■□□□ 1.96
LINC00482-202ENST00000577000 NESP48681 1621 aa27.2■■□□□ 1.95
LINC00482-202ENST00000577000 SMARCA4P51532 1647 aa27.2■■□□□ 1.95
LINC00482-202ENST00000577000 THOC2Q8NI27 1593 aaKnown RBP27.1■■□□□ 1.93
LINC00482-202ENST00000577000 BAZ1BQ9UIG0 1483 aaKnown RBP27.06■■□□□ 1.92
LINC00482-202ENST00000577000 LAMC3Q9Y6N6 1575 aa27.03■■□□□ 1.92
LINC00482-202ENST00000577000 BAZ1AQ9NRL2 1556 aaPredicted RBP27.01■■□□□ 1.91
LINC00482-202ENST00000577000 PEG3Q9GZU2 1588 aa26.96■■□□□ 1.91
LINC00482-202ENST00000577000 KIF21AQ7Z4S6 1674 aa26.92■■□□□ 1.9
LINC00482-202ENST00000577000 PDS5BQ9NTI5 1447 aa26.87■■□□□ 1.89
LINC00482-202ENST00000577000 TRIM41Q8WV44 630 aa26.82■■□□□ 1.88
LINC00482-202ENST00000577000 MROH2BQ7Z745 1585 aa26.69■■□□□ 1.86
LINC00482-202ENST00000577000 MRC2Q9UBG0 1479 aa26.65■■□□□ 1.86
LINC00482-202ENST00000577000 CADPSQ9ULU8 1353 aa26.64■■□□□ 1.86
LINC00482-202ENST00000577000 WDR62O43379 1518 aa26.6■■□□□ 1.85
LINC00482-202ENST00000577000 CEP164Q9UPV0 1460 aa26.45■■□□□ 1.82
LINC00482-202ENST00000577000 WIZO95785 1651 aa26.38■■□□□ 1.81
LINC00482-202ENST00000577000 OSCARQ8IYS5 282 aa26.37■■□□□ 1.81
LINC00482-202ENST00000577000 FANCD2Q9BXW9 1451 aa26.34■■□□□ 1.81
LINC00482-202ENST00000577000 CFTRP13569 1480 aa26.23■■□□□ 1.79
LINC00482-202ENST00000577000 URB2Q14146 1524 aaKnown RBP26.14■■□□□ 1.77
LINC00482-202ENST00000577000 RIMBP3CA6NJZ7 1639 aa26.11■■□□□ 1.77
LINC00482-202ENST00000577000 RIMBP3BA6NNM3 1639 aa26.11■■□□□ 1.77
LINC00482-202ENST00000577000 RIMBP3Q9UFD9 1639 aa26.11■■□□□ 1.77
LINC00482-202ENST00000577000 PRDM2Q13029 1718 aa26.06■■□□□ 1.76
LINC00482-202ENST00000577000 TOP2AP11388 1531 aaKnown RBP26.03■■□□□ 1.76
LINC00482-202ENST00000577000 ARHGEF11O15085 1522 aa25.95■■□□□ 1.74
LINC00482-202ENST00000577000 IFT140Q96RY7 1462 aa25.93■■□□□ 1.74
LINC00482-202ENST00000577000 RSF1Q96T23 1441 aaPredicted RBP25.93■■□□□ 1.74
LINC00482-202ENST00000577000 ZNF608Q9ULD9 1512 aaPredicted RBP25.89■■□□□ 1.74
LINC00482-202ENST00000577000 TOPBP1Q92547 1522 aa25.78■■□□□ 1.72
LINC00482-202ENST00000577000 EIF4G3O43432 1585 aaKnown RBP25.78■■□□□ 1.72
LINC00482-202ENST00000577000 CYB5RLQ6IPT4 315 aa25.76■■□□□ 1.71
LINC00482-202ENST00000577000 ABCC8Q09428 1581 aa25.76■■□□□ 1.71
LINC00482-202ENST00000577000 CHD1O14646 1710 aa25.73■■□□□ 1.71
LINC00482-202ENST00000577000 CCDC88BA6NC98 1476 aa25.7■■□□□ 1.7
LINC00482-202ENST00000577000 DNMBPQ6XZF7 1577 aa25.67■■□□□ 1.7
LINC00482-202ENST00000577000 TRHP20396 242 aaPredicted RBP25.66■■□□□ 1.7
LINC00482-202ENST00000577000 ARAP1Q96P48 1450 aa25.64■■□□□ 1.69
LINC00482-202ENST00000577000 TARBP1Q13395 1621 aaKnown RBP25.62■■□□□ 1.69
LINC00482-202ENST00000577000 AQRO60306 1485 aaKnown RBP eCLIP25.59■■□□□ 1.69
LINC00482-202ENST00000577000 FBLN2P98095 1184 aa25.54■■□□□ 1.68
LINC00482-202ENST00000577000 POLA1P09884 1462 aaPredicted RBP25.47■■□□□ 1.67
LINC00482-202ENST00000577000 WDR97A6NE52 1622 aa25.4■■□□□ 1.66
LINC00482-202ENST00000577000 CLASP1Q7Z460 1538 aa25.37■■□□□ 1.65
LINC00482-202ENST00000577000 AEBP2Q6ZN18 517 aaPredicted RBP25.36■■□□□ 1.65
LINC00482-202ENST00000577000 SOGA1O94964 1423 aa25.36■■□□□ 1.65
LINC00482-202ENST00000577000 SYNJ1O43426 1573 aa25.35■■□□□ 1.65
LINC00482-202ENST00000577000 RAD54L2Q9Y4B4 1467 aa25.35■■□□□ 1.65
LINC00482-202ENST00000577000 SNAPC4Q5SXM2 1469 aa25.34■■□□□ 1.65
LINC00482-202ENST00000577000 TDRD9Q8NDG6 1382 aaKnown RBP25.33■■□□□ 1.65
LINC00482-202ENST00000577000 MAGI1Q96QZ7 1491 aaPredicted RBP25.29■■□□□ 1.64
LINC00482-202ENST00000577000 CHMP7Q8WUX9 453 aaPredicted RBP25.29■■□□□ 1.64
LINC00482-202ENST00000577000 FGD5Q6ZNL6 1462 aa25.24■■□□□ 1.63
LINC00482-202ENST00000577000 GRIN2BQ13224 1484 aa25.21■■□□□ 1.63
LINC00482-202ENST00000577000 SYNJ2O15056 1496 aa25.2■■□□□ 1.62
LINC00482-202ENST00000577000 GAPVD1Q14C86 1478 aa25.14■■□□□ 1.61
LINC00482-202ENST00000577000 PBRM1Q86U86 1689 aa25.13■■□□□ 1.61
LINC00482-202ENST00000577000 CUX1P39880 1505 aa25.12■■□□□ 1.61
LINC00482-202ENST00000577000 ABCA5Q8WWZ7 1642 aa24.97■■□□□ 1.59
LINC00482-202ENST00000577000 ABCA10Q8WWZ4 1543 aa24.95■■□□□ 1.58
LINC00482-202ENST00000577000 ERCC6L2Q5T890 1561 aa24.89■■□□□ 1.58
LINC00482-202ENST00000577000 GRIN2AQ12879 1464 aa24.89■■□□□ 1.57
LINC00482-202ENST00000577000 CEP170Q5SW79 1584 aa24.85■■□□□ 1.57
LINC00482-202ENST00000577000 ADAMTS12P58397 1594 aa24.82■■□□□ 1.56
LINC00482-202ENST00000577000 NUP160Q12769 1436 aa24.81■■□□□ 1.56
LINC00482-202ENST00000577000 SHROOM2Q13796 1616 aa24.81■■□□□ 1.56
LINC00482-202ENST00000577000 KIF13AQ9H1H9 1805 aa24.81■■□□□ 1.56
LINC00482-202ENST00000577000 WRNQ14191 1432 aaPredicted RBP eCLIP24.74■■□□□ 1.55
LINC00482-202ENST00000577000 FHAD1B1AJZ9 1412 aa24.71■■□□□ 1.55
LINC00482-202ENST00000577000 ERICH3Q5RHP9 1530 aa24.65■■□□□ 1.54
LINC00482-202ENST00000577000 BIVM-ERCC5R4GMW8 1640 aa24.64■■□□□ 1.54
LINC00482-202ENST00000577000 TOP2BQ02880 1626 aa24.62■■□□□ 1.53
LINC00482-202ENST00000577000 PRG4Q92954 1404 aaPredicted RBP24.61■■□□□ 1.53
LINC00482-202ENST00000577000 ABCC10Q5T3U5 1492 aa24.56■■□□□ 1.52
LINC00482-202ENST00000577000 JPH4Q96JJ6 628 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms