RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 NISCHQ9Y2I1 1504 aa25.7■■□□□ 1.7
NPLOC4-220ENST00000576940 ABCC9O60706 1549 aa23.57■■□□□ 1.36
NPLOC4-220ENST00000576940 CCDC180Q9P1Z9 1646 aa23.08■■□□□ 1.29
NPLOC4-220ENST00000576940 DNAJC5BQ9UF47 199 aa22.5■■□□□ 1.19
NPLOC4-220ENST00000576940 RB1CC1Q8TDY2 1594 aa22.18■■□□□ 1.14
NPLOC4-220ENST00000576940 DCAF8L2P0C7V8 631 aa22.04■■□□□ 1.12
NPLOC4-220ENST00000576940 PABPN1Q86U42 306 aaKnown RBP eCLIP21.99■■□□□ 1.11
NPLOC4-220ENST00000576940 NACADO15069 1562 aa21.95■■□□□ 1.11
NPLOC4-220ENST00000576940 UNC13AQ9UPW8 1703 aa21.69■■□□□ 1.06
NPLOC4-220ENST00000576940 BICRAQ9NZM4 1560 aa21.59■■□□□ 1.05
NPLOC4-220ENST00000576940 MYO15BQ96JP2 1530 aa21.51■■□□□ 1.03
NPLOC4-220ENST00000576940 CECR2Q9BXF3 1484 aa21.23■□□□□ 0.99
NPLOC4-220ENST00000576940 CC2D2AQ9P2K1 1620 aa21.22■□□□□ 0.99
NPLOC4-220ENST00000576940 ZCCHC6Q5VYS8 1495 aaKnown RBP21.2■□□□□ 0.98
NPLOC4-220ENST00000576940 DCAF1Q9Y4B6 1507 aa21.14■□□□□ 0.97
NPLOC4-220ENST00000576940 SHROOM4Q9ULL8 1493 aa21.13■□□□□ 0.97
NPLOC4-220ENST00000576940 SCRIBQ14160 1630 aa21.12■□□□□ 0.97
NPLOC4-220ENST00000576940 EIF4G1Q04637 1599 aaKnown RBP21.08■□□□□ 0.97
NPLOC4-220ENST00000576940 DNAJC5Q9H3Z4 198 aa20.83■□□□□ 0.93
NPLOC4-220ENST00000576940 CUX2O14529 1486 aa20.34■□□□□ 0.85
NPLOC4-220ENST00000576940 NCAPD3P42695 1498 aa20.33■□□□□ 0.85
NPLOC4-220ENST00000576940 ERCC6Q03468 1493 aa20.33■□□□□ 0.85
NPLOC4-220ENST00000576940 ATAD2BQ9ULI0 1458 aa20.24■□□□□ 0.83
NPLOC4-220ENST00000576940 NESP48681 1621 aa20.16■□□□□ 0.82
NPLOC4-220ENST00000576940 SMARCA2P51531 1590 aa20.09■□□□□ 0.81
NPLOC4-220ENST00000576940 SMARCA4P51532 1647 aa20.09■□□□□ 0.81
NPLOC4-220ENST00000576940 HMGXB3Q12766 1538 aa20.07■□□□□ 0.8
NPLOC4-220ENST00000576940 BAZ1BQ9UIG0 1483 aaKnown RBP20■□□□□ 0.79
NPLOC4-220ENST00000576940 BAZ1AQ9NRL2 1556 aaPredicted RBP19.93■□□□□ 0.78
NPLOC4-220ENST00000576940 THOC2Q8NI27 1593 aaKnown RBP19.91■□□□□ 0.78
NPLOC4-220ENST00000576940 LAMC3Q9Y6N6 1575 aa19.87■□□□□ 0.77
NPLOC4-220ENST00000576940 PEG3Q9GZU2 1588 aa19.86■□□□□ 0.77
NPLOC4-220ENST00000576940 MROH2BQ7Z745 1585 aa19.83■□□□□ 0.77
NPLOC4-220ENST00000576940 TRIM41Q8WV44 630 aa19.83■□□□□ 0.77
NPLOC4-220ENST00000576940 PDS5BQ9NTI5 1447 aa19.81■□□□□ 0.76
NPLOC4-220ENST00000576940 KIF21AQ7Z4S6 1674 aa19.81■□□□□ 0.76
NPLOC4-220ENST00000576940 CADPSQ9ULU8 1353 aa19.72■□□□□ 0.75
NPLOC4-220ENST00000576940 MRC2Q9UBG0 1479 aa19.64■□□□□ 0.73
NPLOC4-220ENST00000576940 WDR62O43379 1518 aa19.58■□□□□ 0.73
NPLOC4-220ENST00000576940 WIZO95785 1651 aa19.57■□□□□ 0.72
NPLOC4-220ENST00000576940 CEP164Q9UPV0 1460 aa19.49■□□□□ 0.71
NPLOC4-220ENST00000576940 OSCARQ8IYS5 282 aa19.49■□□□□ 0.71
NPLOC4-220ENST00000576940 FANCD2Q9BXW9 1451 aa19.48■□□□□ 0.71
NPLOC4-220ENST00000576940 CFTRP13569 1480 aa19.4■□□□□ 0.7
NPLOC4-220ENST00000576940 URB2Q14146 1524 aaKnown RBP19.34■□□□□ 0.69
NPLOC4-220ENST00000576940 RSF1Q96T23 1441 aaPredicted RBP19.32■□□□□ 0.68
NPLOC4-220ENST00000576940 TOP2AP11388 1531 aaKnown RBP19.25■□□□□ 0.67
NPLOC4-220ENST00000576940 ZNF608Q9ULD9 1512 aaPredicted RBP19.19■□□□□ 0.66
NPLOC4-220ENST00000576940 RIMBP3CA6NJZ7 1639 aa19.18■□□□□ 0.66
NPLOC4-220ENST00000576940 RIMBP3BA6NNM3 1639 aa19.18■□□□□ 0.66
NPLOC4-220ENST00000576940 RIMBP3Q9UFD9 1639 aa19.18■□□□□ 0.66
NPLOC4-220ENST00000576940 IFT140Q96RY7 1462 aa19.13■□□□□ 0.65
NPLOC4-220ENST00000576940 CCDC88BA6NC98 1476 aa19.12■□□□□ 0.65
NPLOC4-220ENST00000576940 CYB5RLQ6IPT4 315 aa19.11■□□□□ 0.65
NPLOC4-220ENST00000576940 ARHGEF11O15085 1522 aa19.09■□□□□ 0.65
NPLOC4-220ENST00000576940 TOPBP1Q92547 1522 aa19.07■□□□□ 0.64
NPLOC4-220ENST00000576940 PRDM2Q13029 1718 aa19.06■□□□□ 0.64
NPLOC4-220ENST00000576940 FBLN2P98095 1184 aa19■□□□□ 0.63
NPLOC4-220ENST00000576940 AQRO60306 1485 aaKnown RBP eCLIP19■□□□□ 0.633e-6■□□□□ 10.4
NPLOC4-220ENST00000576940 TRHP20396 242 aaPredicted RBP18.99■□□□□ 0.63
NPLOC4-220ENST00000576940 EIF4G3O43432 1585 aaKnown RBP18.98■□□□□ 0.63
NPLOC4-220ENST00000576940 ABCC8Q09428 1581 aa18.97■□□□□ 0.63
NPLOC4-220ENST00000576940 DNMBPQ6XZF7 1577 aa18.93■□□□□ 0.62
NPLOC4-220ENST00000576940 CHD1O14646 1710 aa18.91■□□□□ 0.62
NPLOC4-220ENST00000576940 ARAP1Q96P48 1450 aa18.9■□□□□ 0.62
NPLOC4-220ENST00000576940 TARBP1Q13395 1621 aaKnown RBP18.89■□□□□ 0.62
NPLOC4-220ENST00000576940 RAD54L2Q9Y4B4 1467 aa18.86■□□□□ 0.61
NPLOC4-220ENST00000576940 POLA1P09884 1462 aaPredicted RBP18.85■□□□□ 0.61
NPLOC4-220ENST00000576940 TDRD9Q8NDG6 1382 aaKnown RBP18.85■□□□□ 0.61
NPLOC4-220ENST00000576940 SOGA1O94964 1423 aa18.82■□□□□ 0.6
NPLOC4-220ENST00000576940 CHMP7Q8WUX9 453 aaPredicted RBP18.77■□□□□ 0.6
NPLOC4-220ENST00000576940 SNAPC4Q5SXM2 1469 aa18.73■□□□□ 0.59
NPLOC4-220ENST00000576940 FGD5Q6ZNL6 1462 aa18.7■□□□□ 0.58
NPLOC4-220ENST00000576940 CLASP1Q7Z460 1538 aa18.68■□□□□ 0.58
NPLOC4-220ENST00000576940 AEBP2Q6ZN18 517 aaPredicted RBP18.64■□□□□ 0.57
NPLOC4-220ENST00000576940 GRIN2BQ13224 1484 aa18.63■□□□□ 0.57
NPLOC4-220ENST00000576940 MAGI1Q96QZ7 1491 aaPredicted RBP18.63■□□□□ 0.57
NPLOC4-220ENST00000576940 CUX1P39880 1505 aa18.63■□□□□ 0.57
NPLOC4-220ENST00000576940 SYNJ1O43426 1573 aa18.63■□□□□ 0.57
NPLOC4-220ENST00000576940 SYNJ2O15056 1496 aa18.59■□□□□ 0.57
NPLOC4-220ENST00000576940 WDR97A6NE52 1622 aa18.59■□□□□ 0.57
NPLOC4-220ENST00000576940 GAPVD1Q14C86 1478 aa18.55■□□□□ 0.56
NPLOC4-220ENST00000576940 PBRM1Q86U86 1689 aa18.48■□□□□ 0.55
NPLOC4-220ENST00000576940 ABCA10Q8WWZ4 1543 aa18.44■□□□□ 0.54
NPLOC4-220ENST00000576940 ERCC6L2Q5T890 1561 aa18.44■□□□□ 0.54
NPLOC4-220ENST00000576940 ABCA5Q8WWZ7 1642 aa18.41■□□□□ 0.54
NPLOC4-220ENST00000576940 GRIN2AQ12879 1464 aa18.39■□□□□ 0.53
NPLOC4-220ENST00000576940 SUPT5HO00267 1087 aaKnown RBP18.36■□□□□ 0.53
NPLOC4-220ENST00000576940 CEP170Q5SW79 1584 aa18.34■□□□□ 0.53
NPLOC4-220ENST00000576940 NUP160Q12769 1436 aa18.33■□□□□ 0.53
NPLOC4-220ENST00000576940 WRNQ14191 1432 aaPredicted RBP eCLIP18.33■□□□□ 0.53
NPLOC4-220ENST00000576940 ADAMTS12P58397 1594 aa18.29■□□□□ 0.52
NPLOC4-220ENST00000576940 FHAD1B1AJZ9 1412 aa18.28■□□□□ 0.52
NPLOC4-220ENST00000576940 JPH4Q96JJ6 628 aa18.26■□□□□ 0.51
NPLOC4-220ENST00000576940 SHROOM2Q13796 1616 aa18.24■□□□□ 0.51
NPLOC4-220ENST00000576940 PRG4Q92954 1404 aaPredicted RBP18.23■□□□□ 0.51
NPLOC4-220ENST00000576940 TOP2BQ02880 1626 aa18.2■□□□□ 0.5
NPLOC4-220ENST00000576940 FAM69CQ0P6D2 419 aa18.2■□□□□ 0.5
NPLOC4-220ENST00000576940 KIF13AQ9H1H9 1805 aa18.19■□□□□ 0.5
NPLOC4-220ENST00000576940 BIVM-ERCC5R4GMW8 1640 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms