RNA–Protein interactions for RNA: ENST00000576718.1

POLR2A-207, Transcript of RNA polymerase II subunit A, humanhuman

TSL 2

Gene POLR2A, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-207ENST00000576718 NISCHQ9Y2I1 1504 aa35.37■■■■□ 3.25
POLR2A-207ENST00000576718 CCDC180Q9P1Z9 1646 aa31.82■■■□□ 2.69
POLR2A-207ENST00000576718 ABCC9O60706 1549 aa31.33■■■□□ 2.61
POLR2A-207ENST00000576718 RB1CC1Q8TDY2 1594 aa30.13■■■□□ 2.41
POLR2A-207ENST00000576718 NACADO15069 1562 aa29.98■■■□□ 2.39
POLR2A-207ENST00000576718 MYO15BQ96JP2 1530 aa29.66■■■□□ 2.34
POLR2A-207ENST00000576718 DCAF8L2P0C7V8 631 aa29.62■■■□□ 2.33
POLR2A-207ENST00000576718 UNC13AQ9UPW8 1703 aa29.4■■■□□ 2.3
POLR2A-207ENST00000576718 ZCCHC6Q5VYS8 1495 aaKnown RBP29.38■■■□□ 2.29
POLR2A-207ENST00000576718 DCAF1Q9Y4B6 1507 aa29.35■■■□□ 2.29
POLR2A-207ENST00000576718 PABPN1Q86U42 306 aaKnown RBP eCLIP29.1■■■□□ 2.25
POLR2A-207ENST00000576718 BICRAQ9NZM4 1560 aa29.06■■■□□ 2.24
POLR2A-207ENST00000576718 SHROOM4Q9ULL8 1493 aa28.97■■■□□ 2.23
POLR2A-207ENST00000576718 DNAJC5BQ9UF47 199 aa28.96■■■□□ 2.23
POLR2A-207ENST00000576718 SCRIBQ14160 1630 aa28.84■■■□□ 2.21
POLR2A-207ENST00000576718 EIF4G1Q04637 1599 aaKnown RBP28.41■■■□□ 2.14
POLR2A-207ENST00000576718 CC2D2AQ9P2K1 1620 aa28.4■■■□□ 2.14
POLR2A-207ENST00000576718 CECR2Q9BXF3 1484 aa28.27■■■□□ 2.12
POLR2A-207ENST00000576718 SMARCA4P51532 1647 aa27.59■■■□□ 2.01
POLR2A-207ENST00000576718 NCAPD3P42695 1498 aa27.57■■■□□ 2
POLR2A-207ENST00000576718 SMARCA2P51531 1590 aa27.56■■■□□ 2
POLR2A-207ENST00000576718 BAZ1AQ9NRL2 1556 aaPredicted RBP27.54■■■□□ 2
POLR2A-207ENST00000576718 ATAD2BQ9ULI0 1458 aa27.49■■□□□ 1.99
POLR2A-207ENST00000576718 HMGXB3Q12766 1538 aa27.48■■□□□ 1.99
POLR2A-207ENST00000576718 PEG3Q9GZU2 1588 aa27.35■■□□□ 1.97
POLR2A-207ENST00000576718 BAZ1BQ9UIG0 1483 aaKnown RBP27.31■■□□□ 1.96
POLR2A-207ENST00000576718 ERCC6Q03468 1493 aa27.18■■□□□ 1.94
POLR2A-207ENST00000576718 MROH2BQ7Z745 1585 aa27.17■■□□□ 1.94
POLR2A-207ENST00000576718 CUX2O14529 1486 aa27.08■■□□□ 1.93
POLR2A-207ENST00000576718 LAMC3Q9Y6N6 1575 aa27.02■■□□□ 1.92
POLR2A-207ENST00000576718 NESP48681 1621 aa26.93■■□□□ 1.9
POLR2A-207ENST00000576718 WIZO95785 1651 aa26.91■■□□□ 1.9
POLR2A-207ENST00000576718 PDS5BQ9NTI5 1447 aa26.82■■□□□ 1.88
POLR2A-207ENST00000576718 THOC2Q8NI27 1593 aaKnown RBP26.76■■□□□ 1.87
POLR2A-207ENST00000576718 KIF21AQ7Z4S6 1674 aa26.76■■□□□ 1.87
POLR2A-207ENST00000576718 CADPSQ9ULU8 1353 aa26.72■■□□□ 1.87
POLR2A-207ENST00000576718 RSF1Q96T23 1441 aaPredicted RBP26.7■■□□□ 1.86
POLR2A-207ENST00000576718 TOP2AP11388 1531 aaKnown RBP26.67■■□□□ 1.86
POLR2A-207ENST00000576718 DNAJC5Q9H3Z4 198 aa26.61■■□□□ 1.85
POLR2A-207ENST00000576718 MRC2Q9UBG0 1479 aa26.54■■□□□ 1.84
POLR2A-207ENST00000576718 CEP164Q9UPV0 1460 aa26.5■■□□□ 1.83
POLR2A-207ENST00000576718 CFTRP13569 1480 aa26.49■■□□□ 1.83
POLR2A-207ENST00000576718 WDR62O43379 1518 aa26.48■■□□□ 1.83
POLR2A-207ENST00000576718 PRDM2Q13029 1718 aa26.46■■□□□ 1.83
POLR2A-207ENST00000576718 FANCD2Q9BXW9 1451 aa26.44■■□□□ 1.82
POLR2A-207ENST00000576718 CCDC88BA6NC98 1476 aa26.25■■□□□ 1.79
POLR2A-207ENST00000576718 URB2Q14146 1524 aaKnown RBP26.14■■□□□ 1.78
POLR2A-207ENST00000576718 ABCC8Q09428 1581 aa26.07■■□□□ 1.76
POLR2A-207ENST00000576718 TOPBP1Q92547 1522 aa25.96■■□□□ 1.75
POLR2A-207ENST00000576718 IFT140Q96RY7 1462 aa25.96■■□□□ 1.75
POLR2A-207ENST00000576718 DNMBPQ6XZF7 1577 aa25.95■■□□□ 1.75
POLR2A-207ENST00000576718 OSCARQ8IYS5 282 aa25.77■■□□□ 1.72
POLR2A-207ENST00000576718 EIF4G3O43432 1585 aaKnown RBP25.76■■□□□ 1.71
POLR2A-207ENST00000576718 ZNF608Q9ULD9 1512 aaPredicted RBP25.73■■□□□ 1.71
POLR2A-207ENST00000576718 TARBP1Q13395 1621 aaKnown RBP25.71■■□□□ 1.71
POLR2A-207ENST00000576718 POLA1P09884 1462 aaPredicted RBP25.69■■□□□ 1.7
POLR2A-207ENST00000576718 WDR97A6NE52 1622 aa25.69■■□□□ 1.7
POLR2A-207ENST00000576718 SUPT5HO00267 1087 aaKnown RBP25.62■■□□□ 1.69
POLR2A-207ENST00000576718 SOGA1O94964 1423 aa25.57■■□□□ 1.68
POLR2A-207ENST00000576718 FGD5Q6ZNL6 1462 aa25.57■■□□□ 1.68
POLR2A-207ENST00000576718 CUX1P39880 1505 aa25.55■■□□□ 1.68
POLR2A-207ENST00000576718 CHD1O14646 1710 aa25.54■■□□□ 1.68
POLR2A-207ENST00000576718 AQRO60306 1485 aaKnown RBP eCLIP25.53■■□□□ 1.68
POLR2A-207ENST00000576718 TRIM41Q8WV44 630 aa25.53■■□□□ 1.68
POLR2A-207ENST00000576718 RAD54L2Q9Y4B4 1467 aa25.51■■□□□ 1.67
POLR2A-207ENST00000576718 RIMBP3CA6NJZ7 1639 aa25.45■■□□□ 1.66
POLR2A-207ENST00000576718 RIMBP3BA6NNM3 1639 aa25.45■■□□□ 1.66
POLR2A-207ENST00000576718 RIMBP3Q9UFD9 1639 aa25.45■■□□□ 1.66
POLR2A-207ENST00000576718 MAGI1Q96QZ7 1491 aaPredicted RBP25.41■■□□□ 1.66
POLR2A-207ENST00000576718 TDRD9Q8NDG6 1382 aaKnown RBP25.41■■□□□ 1.66
POLR2A-207ENST00000576718 GRIN2BQ13224 1484 aa25.39■■□□□ 1.65
POLR2A-207ENST00000576718 ARHGEF11O15085 1522 aa25.38■■□□□ 1.65
POLR2A-207ENST00000576718 SNAPC4Q5SXM2 1469 aa25.38■■□□□ 1.65
POLR2A-207ENST00000576718 PBRM1Q86U86 1689 aa25.38■■□□□ 1.65
POLR2A-207ENST00000576718 FBLN2P98095 1184 aa25.36■■□□□ 1.65
POLR2A-207ENST00000576718 ABCA10Q8WWZ4 1543 aa25.33■■□□□ 1.65
POLR2A-207ENST00000576718 BIVM-ERCC5R4GMW8 1640 aa25.33■■□□□ 1.65
POLR2A-207ENST00000576718 SYNJ1O43426 1573 aa25.32■■□□□ 1.64
POLR2A-207ENST00000576718 GAPVD1Q14C86 1478 aa25.31■■□□□ 1.64
POLR2A-207ENST00000576718 TOP2BQ02880 1626 aa25.3■■□□□ 1.64
POLR2A-207ENST00000576718 ABCA5Q8WWZ7 1642 aa25.3■■□□□ 1.64
POLR2A-207ENST00000576718 WRNQ14191 1432 aaPredicted RBP eCLIP25.29■■□□□ 1.64
POLR2A-207ENST00000576718 SYNJ2O15056 1496 aa25.28■■□□□ 1.64
POLR2A-207ENST00000576718 CHMP7Q8WUX9 453 aaPredicted RBP25.26■■□□□ 1.63
POLR2A-207ENST00000576718 CLASP1Q7Z460 1538 aa25.21■■□□□ 1.63
POLR2A-207ENST00000576718 ADAMTS12P58397 1594 aa25.1■■□□□ 1.61
POLR2A-207ENST00000576718 ARAP1Q96P48 1450 aa25.09■■□□□ 1.61
POLR2A-207ENST00000576718 ERICH3Q5RHP9 1530 aa25.08■■□□□ 1.61
POLR2A-207ENST00000576718 CYB5RLQ6IPT4 315 aa25.08■■□□□ 1.61
POLR2A-207ENST00000576718 GRIN2AQ12879 1464 aa25.05■■□□□ 1.6
POLR2A-207ENST00000576718 FHAD1B1AJZ9 1412 aa25.02■■□□□ 1.6
POLR2A-207ENST00000576718 NUP160Q12769 1436 aa24.94■■□□□ 1.58
POLR2A-207ENST00000576718 CEP170Q5SW79 1584 aa24.9■■□□□ 1.58
POLR2A-207ENST00000576718 SHROOM2Q13796 1616 aa24.85■■□□□ 1.57
POLR2A-207ENST00000576718 CUL7Q14999 1698 aa24.83■■□□□ 1.57
POLR2A-207ENST00000576718 KIF27Q86VH2 1401 aa24.82■■□□□ 1.56
POLR2A-207ENST00000576718 TRHP20396 242 aaPredicted RBP24.78■■□□□ 1.56
POLR2A-207ENST00000576718 RUSC2Q8N2Y8 1516 aa24.74■■□□□ 1.55
POLR2A-207ENST00000576718 ERCC6L2Q5T890 1561 aa24.69■■□□□ 1.54
POLR2A-207ENST00000576718 PRG4Q92954 1404 aaPredicted RBP24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms