RNA–Protein interactions for RNA: ENST00000576462.1

SLC12A4-217, Transcript of solute carrier family 12 member 4, humanhuman

TSL 2

Gene SLC12A4, Length 673 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-217ENST00000576462 NISCHQ9Y2I1 1504 aa49.94■■■■■ 5.58
SLC12A4-217ENST00000576462 ABCC9O60706 1549 aa45.15■■■■■ 4.82
SLC12A4-217ENST00000576462 CCDC180Q9P1Z9 1646 aa44.83■■■■■ 4.77
SLC12A4-217ENST00000576462 RB1CC1Q8TDY2 1594 aa42.8■■■■■ 4.44
SLC12A4-217ENST00000576462 DNAJC5BQ9UF47 199 aa42.51■■■■■ 4.4
SLC12A4-217ENST00000576462 NACADO15069 1562 aa42.44■■■■■ 4.39
SLC12A4-217ENST00000576462 DCAF8L2P0C7V8 631 aa42.42■■■■■ 4.38
SLC12A4-217ENST00000576462 PABPN1Q86U42 306 aaKnown RBP eCLIP42.06■■■■■ 4.322e-9■□□□□ 10.9
SLC12A4-217ENST00000576462 UNC13AQ9UPW8 1703 aa41.81■■■■■ 4.28
SLC12A4-217ENST00000576462 MYO15BQ96JP2 1530 aa41.74■■■■■ 4.27
SLC12A4-217ENST00000576462 BICRAQ9NZM4 1560 aa41.57■■■■■ 4.25
SLC12A4-217ENST00000576462 ZCCHC6Q5VYS8 1495 aaKnown RBP41.34■■■■■ 4.21
SLC12A4-217ENST00000576462 DCAF1Q9Y4B6 1507 aa41.17■■■■■ 4.18
SLC12A4-217ENST00000576462 SCRIBQ14160 1630 aa40.96■■■■■ 4.15
SLC12A4-217ENST00000576462 SHROOM4Q9ULL8 1493 aa40.9■■■■■ 4.14
SLC12A4-217ENST00000576462 CC2D2AQ9P2K1 1620 aa40.71■■■■■ 4.11
SLC12A4-217ENST00000576462 CECR2Q9BXF3 1484 aa40.65■■■■■ 4.1
SLC12A4-217ENST00000576462 EIF4G1Q04637 1599 aaKnown RBP40.57■■■■■ 4.09
SLC12A4-217ENST00000576462 NCAPD3P42695 1498 aa39.2■■■■□ 3.87
SLC12A4-217ENST00000576462 DNAJC5Q9H3Z4 198 aa39.12■■■■□ 3.85
SLC12A4-217ENST00000576462 ATAD2BQ9ULI0 1458 aa39.09■■■■□ 3.85
SLC12A4-217ENST00000576462 SMARCA4P51532 1647 aa39■■■■□ 3.83
SLC12A4-217ENST00000576462 ERCC6Q03468 1493 aa38.99■■■■□ 3.83
SLC12A4-217ENST00000576462 SMARCA2P51531 1590 aa38.95■■■■□ 3.83
SLC12A4-217ENST00000576462 CUX2O14529 1486 aa38.89■■■■□ 3.82
SLC12A4-217ENST00000576462 HMGXB3Q12766 1538 aa38.87■■■■□ 3.81
SLC12A4-217ENST00000576462 BAZ1AQ9NRL2 1556 aaPredicted RBP38.77■■■■□ 3.8
SLC12A4-217ENST00000576462 NESP48681 1621 aa38.73■■■■□ 3.79
SLC12A4-217ENST00000576462 BAZ1BQ9UIG0 1483 aaKnown RBP38.73■■■■□ 3.79
SLC12A4-217ENST00000576462 PEG3Q9GZU2 1588 aa38.56■■■■□ 3.76
SLC12A4-217ENST00000576462 MROH2BQ7Z745 1585 aa38.52■■■■□ 3.76
SLC12A4-217ENST00000576462 LAMC3Q9Y6N6 1575 aa38.34■■■■□ 3.73
SLC12A4-217ENST00000576462 THOC2Q8NI27 1593 aaKnown RBP38.29■■■■□ 3.72
SLC12A4-217ENST00000576462 PDS5BQ9NTI5 1447 aa38.17■■■■□ 3.7
SLC12A4-217ENST00000576462 KIF21AQ7Z4S6 1674 aa38.17■■■■□ 3.7
SLC12A4-217ENST00000576462 WIZO95785 1651 aa38.04■■■■□ 3.68
SLC12A4-217ENST00000576462 CADPSQ9ULU8 1353 aa38.04■■■■□ 3.68
SLC12A4-217ENST00000576462 MRC2Q9UBG0 1479 aa37.85■■■■□ 3.65
SLC12A4-217ENST00000576462 WDR62O43379 1518 aa37.73■■■■□ 3.63
SLC12A4-217ENST00000576462 CEP164Q9UPV0 1460 aa37.68■■■■□ 3.62
SLC12A4-217ENST00000576462 RSF1Q96T23 1441 aaPredicted RBP37.65■■■■□ 3.62
SLC12A4-217ENST00000576462 FANCD2Q9BXW9 1451 aa37.62■■■■□ 3.61
SLC12A4-217ENST00000576462 CFTRP13569 1480 aa37.55■■■■□ 3.6
SLC12A4-217ENST00000576462 TOP2AP11388 1531 aaKnown RBP37.52■■■■□ 3.6
SLC12A4-217ENST00000576462 TRIM41Q8WV44 630 aa37.45■■■■□ 3.59
SLC12A4-217ENST00000576462 URB2Q14146 1524 aaKnown RBP37.32■■■■□ 3.57
SLC12A4-217ENST00000576462 OSCARQ8IYS5 282 aa37.16■■■■□ 3.54
SLC12A4-217ENST00000576462 CCDC88BA6NC98 1476 aa37.13■■■■□ 3.54
SLC12A4-217ENST00000576462 PRDM2Q13029 1718 aa37.09■■■■□ 3.53
SLC12A4-217ENST00000576462 ZNF608Q9ULD9 1512 aaPredicted RBP36.92■■■■□ 3.5
SLC12A4-217ENST00000576462 IFT140Q96RY7 1462 aa36.91■■■■□ 3.5
SLC12A4-217ENST00000576462 TOPBP1Q92547 1522 aa36.88■■■■□ 3.49
SLC12A4-217ENST00000576462 ABCC8Q09428 1581 aa36.74■■■■□ 3.47
SLC12A4-217ENST00000576462 DNMBPQ6XZF7 1577 aa36.71■■■■□ 3.47
SLC12A4-217ENST00000576462 RIMBP3CA6NJZ7 1639 aa36.67■■■■□ 3.46
SLC12A4-217ENST00000576462 RIMBP3BA6NNM3 1639 aa36.67■■■■□ 3.46
SLC12A4-217ENST00000576462 RIMBP3Q9UFD9 1639 aa36.67■■■■□ 3.46
SLC12A4-217ENST00000576462 EIF4G3O43432 1585 aaKnown RBP36.66■■■■□ 3.46
SLC12A4-217ENST00000576462 AQRO60306 1485 aaKnown RBP eCLIP36.57■■■■□ 3.456e-7■■□□□ 14.3
SLC12A4-217ENST00000576462 TARBP1Q13395 1621 aaKnown RBP36.53■■■■□ 3.44
SLC12A4-217ENST00000576462 ARHGEF11O15085 1522 aa36.53■■■■□ 3.44
SLC12A4-217ENST00000576462 POLA1P09884 1462 aaPredicted RBP36.5■■■■□ 3.43
SLC12A4-217ENST00000576462 FBLN2P98095 1184 aa36.44■■■■□ 3.42
SLC12A4-217ENST00000576462 CHD1O14646 1710 aa36.42■■■■□ 3.42
SLC12A4-217ENST00000576462 RAD54L2Q9Y4B4 1467 aa36.42■■■■□ 3.42
SLC12A4-217ENST00000576462 CYB5RLQ6IPT4 315 aa36.36■■■■□ 3.41
SLC12A4-217ENST00000576462 SOGA1O94964 1423 aa36.35■■■■□ 3.41
SLC12A4-217ENST00000576462 TDRD9Q8NDG6 1382 aaKnown RBP36.34■■■■□ 3.41
SLC12A4-217ENST00000576462 FGD5Q6ZNL6 1462 aa36.26■■■■□ 3.4
SLC12A4-217ENST00000576462 CUX1P39880 1505 aa36.19■■■■□ 3.38
SLC12A4-217ENST00000576462 SNAPC4Q5SXM2 1469 aa36.18■■■■□ 3.38
SLC12A4-217ENST00000576462 ARAP1Q96P48 1450 aa36.17■■■■□ 3.38
SLC12A4-217ENST00000576462 CHMP7Q8WUX9 453 aaPredicted RBP36.1■■■■□ 3.37
SLC12A4-217ENST00000576462 WDR97A6NE52 1622 aa36.09■■■■□ 3.37
SLC12A4-217ENST00000576462 TRHP20396 242 aaPredicted RBP36.04■■■■□ 3.36
SLC12A4-217ENST00000576462 GRIN2BQ13224 1484 aa36.03■■■■□ 3.36
SLC12A4-217ENST00000576462 MAGI1Q96QZ7 1491 aaPredicted RBP36.02■■■■□ 3.36
SLC12A4-217ENST00000576462 SUPT5HO00267 1087 aaKnown RBP35.99■■■■□ 3.35
SLC12A4-217ENST00000576462 CLASP1Q7Z460 1538 aa35.98■■■■□ 3.35
SLC12A4-217ENST00000576462 SYNJ1O43426 1573 aa35.96■■■■□ 3.35
SLC12A4-217ENST00000576462 SYNJ2O15056 1496 aa35.92■■■■□ 3.34
SLC12A4-217ENST00000576462 GAPVD1Q14C86 1478 aa35.89■■■■□ 3.34
SLC12A4-217ENST00000576462 PBRM1Q86U86 1689 aa35.85■■■■□ 3.33
SLC12A4-217ENST00000576462 ABCA10Q8WWZ4 1543 aa35.79■■■■□ 3.32
SLC12A4-217ENST00000576462 ABCA5Q8WWZ7 1642 aa35.75■■■■□ 3.31
SLC12A4-217ENST00000576462 WRNQ14191 1432 aaPredicted RBP eCLIP35.65■■■■□ 3.3
SLC12A4-217ENST00000576462 GRIN2AQ12879 1464 aa35.56■■■■□ 3.28
SLC12A4-217ENST00000576462 TOP2BQ02880 1626 aa35.53■■■■□ 3.28
SLC12A4-217ENST00000576462 BIVM-ERCC5R4GMW8 1640 aa35.52■■■■□ 3.28
SLC12A4-217ENST00000576462 ADAMTS12P58397 1594 aa35.51■■■■□ 3.28
SLC12A4-217ENST00000576462 ERCC6L2Q5T890 1561 aa35.47■■■■□ 3.27
SLC12A4-217ENST00000576462 CEP170Q5SW79 1584 aa35.45■■■■□ 3.27
SLC12A4-217ENST00000576462 NUP160Q12769 1436 aa35.43■■■■□ 3.26
SLC12A4-217ENST00000576462 FHAD1B1AJZ9 1412 aa35.42■■■■□ 3.26
SLC12A4-217ENST00000576462 ERICH3Q5RHP9 1530 aa35.33■■■■□ 3.25
SLC12A4-217ENST00000576462 SHROOM2Q13796 1616 aa35.26■■■■□ 3.24
SLC12A4-217ENST00000576462 PRG4Q92954 1404 aaPredicted RBP35.16■■■■□ 3.22
SLC12A4-217ENST00000576462 JPH4Q96JJ6 628 aa35.13■■■■□ 3.21
SLC12A4-217ENST00000576462 AEBP2Q6ZN18 517 aaPredicted RBP35.1■■■■□ 3.21
SLC12A4-217ENST00000576462 RUSC2Q8N2Y8 1516 aa35.01■■■■□ 3.2
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