RNA–Protein interactions for RNA: ENST00000575981.1

PKMYT1-219, Transcript of protein kinase, membrane associated tyrosine/threonine 1, humanhuman

TSL 2

Gene PKMYT1, Length 910 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKMYT1-219ENST00000575981 NISCHQ9Y2I1 1504 aa46.4■■■■■ 5.02
PKMYT1-219ENST00000575981 CCDC180Q9P1Z9 1646 aa41.44■■■■■ 4.22
PKMYT1-219ENST00000575981 ABCC9O60706 1549 aa40.91■■■■■ 4.14
PKMYT1-219ENST00000575981 RB1CC1Q8TDY2 1594 aa39.18■■■■□ 3.86
PKMYT1-219ENST00000575981 NACADO15069 1562 aa39.03■■■■□ 3.84
PKMYT1-219ENST00000575981 DCAF8L2P0C7V8 631 aa38.95■■■■□ 3.83
PKMYT1-219ENST00000575981 MYO15BQ96JP2 1530 aa38.64■■■■□ 3.78
PKMYT1-219ENST00000575981 ZCCHC6Q5VYS8 1495 aaKnown RBP38.58■■■■□ 3.77
PKMYT1-219ENST00000575981 DCAF1Q9Y4B6 1507 aa38.35■■■■□ 3.73
PKMYT1-219ENST00000575981 UNC13AQ9UPW8 1703 aa38.32■■■■□ 3.73
PKMYT1-219ENST00000575981 PABPN1Q86U42 306 aaKnown RBP eCLIP38.15■■■■□ 3.7
PKMYT1-219ENST00000575981 BICRAQ9NZM4 1560 aa38■■■■□ 3.67
PKMYT1-219ENST00000575981 DNAJC5BQ9UF47 199 aa37.84■■■■□ 3.65
PKMYT1-219ENST00000575981 SCRIBQ14160 1630 aa37.81■■■■□ 3.64
PKMYT1-219ENST00000575981 SHROOM4Q9ULL8 1493 aa37.55■■■■□ 3.6
PKMYT1-219ENST00000575981 EIF4G1Q04637 1599 aaKnown RBP37.04■■■■□ 3.52
PKMYT1-219ENST00000575981 CC2D2AQ9P2K1 1620 aa36.99■■■■□ 3.51
PKMYT1-219ENST00000575981 CECR2Q9BXF3 1484 aa36.79■■■■□ 3.48
PKMYT1-219ENST00000575981 SMARCA4P51532 1647 aa36.11■■■■□ 3.37
PKMYT1-219ENST00000575981 BAZ1AQ9NRL2 1556 aaPredicted RBP36.01■■■■□ 3.35
PKMYT1-219ENST00000575981 NCAPD3P42695 1498 aa35.99■■■■□ 3.35
PKMYT1-219ENST00000575981 ATAD2BQ9ULI0 1458 aa35.98■■■■□ 3.35
PKMYT1-219ENST00000575981 SMARCA2P51531 1590 aa35.93■■■■□ 3.34
PKMYT1-219ENST00000575981 HMGXB3Q12766 1538 aa35.82■■■■□ 3.32
PKMYT1-219ENST00000575981 MROH2BQ7Z745 1585 aa35.76■■■■□ 3.32
PKMYT1-219ENST00000575981 PEG3Q9GZU2 1588 aa35.73■■■■□ 3.31
PKMYT1-219ENST00000575981 BAZ1BQ9UIG0 1483 aaKnown RBP35.69■■■■□ 3.3
PKMYT1-219ENST00000575981 WIZO95785 1651 aa35.39■■■■□ 3.26
PKMYT1-219ENST00000575981 ERCC6Q03468 1493 aa35.3■■■■□ 3.24
PKMYT1-219ENST00000575981 NESP48681 1621 aa35.29■■■■□ 3.24
PKMYT1-219ENST00000575981 RSF1Q96T23 1441 aaPredicted RBP35.21■■■■□ 3.23
PKMYT1-219ENST00000575981 LAMC3Q9Y6N6 1575 aa35.13■■■■□ 3.21
PKMYT1-219ENST00000575981 CUX2O14529 1486 aa35.03■■■■□ 3.2
PKMYT1-219ENST00000575981 TOP2AP11388 1531 aaKnown RBP34.97■■■■□ 3.19
PKMYT1-219ENST00000575981 CADPSQ9ULU8 1353 aa34.94■■■■□ 3.18
PKMYT1-219ENST00000575981 PDS5BQ9NTI5 1447 aa34.9■■■■□ 3.18
PKMYT1-219ENST00000575981 KIF21AQ7Z4S6 1674 aa34.89■■■■□ 3.18
PKMYT1-219ENST00000575981 THOC2Q8NI27 1593 aaKnown RBP34.84■■■■□ 3.17
PKMYT1-219ENST00000575981 CFTRP13569 1480 aa34.65■■■■□ 3.14
PKMYT1-219ENST00000575981 MRC2Q9UBG0 1479 aa34.58■■■■□ 3.13
PKMYT1-219ENST00000575981 FANCD2Q9BXW9 1451 aa34.56■■■■□ 3.12
PKMYT1-219ENST00000575981 CEP164Q9UPV0 1460 aa34.56■■■■□ 3.12
PKMYT1-219ENST00000575981 CCDC88BA6NC98 1476 aa34.55■■■■□ 3.12
PKMYT1-219ENST00000575981 WDR62O43379 1518 aa34.48■■■■□ 3.11
PKMYT1-219ENST00000575981 PRDM2Q13029 1718 aa34.42■■■■□ 3.1
PKMYT1-219ENST00000575981 DNAJC5Q9H3Z4 198 aa34.36■■■■□ 3.09
PKMYT1-219ENST00000575981 URB2Q14146 1524 aaKnown RBP34.25■■■■□ 3.07
PKMYT1-219ENST00000575981 SUPT5HO00267 1087 aaKnown RBP34.07■■■■□ 3.04
PKMYT1-219ENST00000575981 TOPBP1Q92547 1522 aa33.97■■■■□ 3.03
PKMYT1-219ENST00000575981 ABCC8Q09428 1581 aa33.92■■■■□ 3.02
PKMYT1-219ENST00000575981 DNMBPQ6XZF7 1577 aa33.9■■■■□ 3.02
PKMYT1-219ENST00000575981 IFT140Q96RY7 1462 aa33.84■■■■□ 3.01
PKMYT1-219ENST00000575981 ZNF608Q9ULD9 1512 aaPredicted RBP33.74■■■□□ 2.99
PKMYT1-219ENST00000575981 POLA1P09884 1462 aaPredicted RBP33.66■■■□□ 2.98
PKMYT1-219ENST00000575981 TARBP1Q13395 1621 aaKnown RBP33.63■■■□□ 2.97
PKMYT1-219ENST00000575981 EIF4G3O43432 1585 aaKnown RBP33.6■■■□□ 2.97
PKMYT1-219ENST00000575981 CUX1P39880 1505 aa33.58■■■□□ 2.97
PKMYT1-219ENST00000575981 FGD5Q6ZNL6 1462 aa33.53■■■□□ 2.96
PKMYT1-219ENST00000575981 RAD54L2Q9Y4B4 1467 aa33.52■■■□□ 2.96
PKMYT1-219ENST00000575981 OSCARQ8IYS5 282 aa33.5■■■□□ 2.95
PKMYT1-219ENST00000575981 SOGA1O94964 1423 aa33.5■■■□□ 2.95
PKMYT1-219ENST00000575981 AQRO60306 1485 aaKnown RBP eCLIP33.49■■■□□ 2.954e-11■■■■■ 27.6
PKMYT1-219ENST00000575981 TDRD9Q8NDG6 1382 aaKnown RBP33.37■■■□□ 2.93
PKMYT1-219ENST00000575981 WDR97A6NE52 1622 aa33.33■■■□□ 2.93
PKMYT1-219ENST00000575981 CHD1O14646 1710 aa33.27■■■□□ 2.92
PKMYT1-219ENST00000575981 WRNQ14191 1432 aaPredicted RBP eCLIP33.22■■■□□ 2.91
PKMYT1-219ENST00000575981 BIVM-ERCC5R4GMW8 1640 aa33.2■■■□□ 2.91
PKMYT1-219ENST00000575981 TOP2BQ02880 1626 aa33.2■■■□□ 2.9
PKMYT1-219ENST00000575981 SNAPC4Q5SXM2 1469 aa33.18■■■□□ 2.9
PKMYT1-219ENST00000575981 SYNJ1O43426 1573 aa33.18■■■□□ 2.9
PKMYT1-219ENST00000575981 FBLN2P98095 1184 aa33.18■■■□□ 2.9
PKMYT1-219ENST00000575981 ABCA10Q8WWZ4 1543 aa33.17■■■□□ 2.9
PKMYT1-219ENST00000575981 GRIN2BQ13224 1484 aa33.16■■■□□ 2.9
PKMYT1-219ENST00000575981 TRIM41Q8WV44 630 aa33.13■■■□□ 2.89
PKMYT1-219ENST00000575981 GAPVD1Q14C86 1478 aa33.12■■■□□ 2.89
PKMYT1-219ENST00000575981 MAGI1Q96QZ7 1491 aaPredicted RBP33.12■■■□□ 2.89
PKMYT1-219ENST00000575981 PBRM1Q86U86 1689 aa33.11■■■□□ 2.89
PKMYT1-219ENST00000575981 ABCA5Q8WWZ7 1642 aa33.1■■■□□ 2.89
PKMYT1-219ENST00000575981 RIMBP3CA6NJZ7 1639 aa33.05■■■□□ 2.88
PKMYT1-219ENST00000575981 RIMBP3BA6NNM3 1639 aa33.05■■■□□ 2.88
PKMYT1-219ENST00000575981 RIMBP3Q9UFD9 1639 aa33.05■■■□□ 2.88
PKMYT1-219ENST00000575981 CHMP7Q8WUX9 453 aaPredicted RBP33.01■■■□□ 2.87
PKMYT1-219ENST00000575981 SYNJ2O15056 1496 aa32.99■■■□□ 2.87
PKMYT1-219ENST00000575981 ARHGEF11O15085 1522 aa32.99■■■□□ 2.87
PKMYT1-219ENST00000575981 CLASP1Q7Z460 1538 aa32.86■■■□□ 2.85
PKMYT1-219ENST00000575981 ADAMTS12P58397 1594 aa32.81■■■□□ 2.84
PKMYT1-219ENST00000575981 ERICH3Q5RHP9 1530 aa32.77■■■□□ 2.84
PKMYT1-219ENST00000575981 GRIN2AQ12879 1464 aa32.74■■■□□ 2.83
PKMYT1-219ENST00000575981 FHAD1B1AJZ9 1412 aa32.71■■■□□ 2.83
PKMYT1-219ENST00000575981 ARAP1Q96P48 1450 aa32.7■■■□□ 2.83
PKMYT1-219ENST00000575981 CYB5RLQ6IPT4 315 aa32.69■■■□□ 2.82
PKMYT1-219ENST00000575981 CEP170Q5SW79 1584 aa32.6■■■□□ 2.81
PKMYT1-219ENST00000575981 NUP160Q12769 1436 aa32.6■■■□□ 2.81
PKMYT1-219ENST00000575981 KIF27Q86VH2 1401 aa32.55■■■□□ 2.8
PKMYT1-219ENST00000575981 IGF1RP08069 1367 aa32.45■■■□□ 2.78
PKMYT1-219ENST00000575981 CUL7Q14999 1698 aa32.43■■■□□ 2.78
PKMYT1-219ENST00000575981 SHROOM2Q13796 1616 aa32.4■■■□□ 2.78
PKMYT1-219ENST00000575981 ERCC6L2Q5T890 1561 aa32.4■■■□□ 2.78
PKMYT1-219ENST00000575981 RUSC2Q8N2Y8 1516 aa32.34■■■□□ 2.77
PKMYT1-219ENST00000575981 CARMIL1Q5VZK9 1371 aa32.26■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 390 ms