RNA–Protein interactions for RNA: ENST00000575957.1

EIF4A3-205, Transcript of eukaryotic translation initiation factor 4A3, humanhuman

TSL 2

Gene EIF4A3, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A3-205ENST00000575957 NISCHQ9Y2I1 1504 aa42.2■■■■■ 4.35
EIF4A3-205ENST00000575957 ABCC9O60706 1549 aa38.4■■■■□ 3.74
EIF4A3-205ENST00000575957 CCDC180Q9P1Z9 1646 aa38■■■■□ 3.67
EIF4A3-205ENST00000575957 RB1CC1Q8TDY2 1594 aa36.36■■■■□ 3.41
EIF4A3-205ENST00000575957 DNAJC5BQ9UF47 199 aa36.35■■■■□ 3.41
EIF4A3-205ENST00000575957 NACADO15069 1562 aa36.02■■■■□ 3.36
EIF4A3-205ENST00000575957 DCAF8L2P0C7V8 631 aa35.77■■■■□ 3.32
EIF4A3-205ENST00000575957 PABPN1Q86U42 306 aaKnown RBP eCLIP35.69■■■■□ 3.3
EIF4A3-205ENST00000575957 UNC13AQ9UPW8 1703 aa35.54■■■■□ 3.28
EIF4A3-205ENST00000575957 MYO15BQ96JP2 1530 aa35.38■■■■□ 3.25
EIF4A3-205ENST00000575957 BICRAQ9NZM4 1560 aa35.34■■■■□ 3.25
EIF4A3-205ENST00000575957 ZCCHC6Q5VYS8 1495 aaKnown RBP34.9■■■■□ 3.18
EIF4A3-205ENST00000575957 DCAF1Q9Y4B6 1507 aa34.81■■■■□ 3.16
EIF4A3-205ENST00000575957 SHROOM4Q9ULL8 1493 aa34.78■■■■□ 3.16
EIF4A3-205ENST00000575957 CC2D2AQ9P2K1 1620 aa34.66■■■■□ 3.14
EIF4A3-205ENST00000575957 SCRIBQ14160 1630 aa34.64■■■■□ 3.14
EIF4A3-205ENST00000575957 CECR2Q9BXF3 1484 aa34.62■■■■□ 3.13
EIF4A3-205ENST00000575957 EIF4G1Q04637 1599 aaKnown RBP34.49■■■■□ 3.11
EIF4A3-205ENST00000575957 DNAJC5Q9H3Z4 198 aa33.61■■■□□ 2.97
EIF4A3-205ENST00000575957 NCAPD3P42695 1498 aa33.26■■■□□ 2.92
EIF4A3-205ENST00000575957 CUX2O14529 1486 aa33.21■■■□□ 2.91
EIF4A3-205ENST00000575957 ERCC6Q03468 1493 aa33.17■■■□□ 2.9
EIF4A3-205ENST00000575957 ATAD2BQ9ULI0 1458 aa33.12■■■□□ 2.89
EIF4A3-205ENST00000575957 SMARCA4P51532 1647 aa32.99■■■□□ 2.87
EIF4A3-205ENST00000575957 SMARCA2P51531 1590 aa32.99■■■□□ 2.87
EIF4A3-205ENST00000575957 HMGXB3Q12766 1538 aa32.98■■■□□ 2.87
EIF4A3-205ENST00000575957 NESP48681 1621 aa32.89■■■□□ 2.86
EIF4A3-205ENST00000575957 BAZ1BQ9UIG0 1483 aaKnown RBP32.78■■■□□ 2.84
EIF4A3-205ENST00000575957 BAZ1AQ9NRL2 1556 aaPredicted RBP32.76■■■□□ 2.84
EIF4A3-205ENST00000575957 PEG3Q9GZU2 1588 aa32.66■■■□□ 2.82
EIF4A3-205ENST00000575957 THOC2Q8NI27 1593 aaKnown RBP32.62■■■□□ 2.81
EIF4A3-205ENST00000575957 LAMC3Q9Y6N6 1575 aa32.56■■■□□ 2.8
EIF4A3-205ENST00000575957 MROH2BQ7Z745 1585 aa32.52■■■□□ 2.8
EIF4A3-205ENST00000575957 KIF21AQ7Z4S6 1674 aa32.43■■■□□ 2.78
EIF4A3-205ENST00000575957 PDS5BQ9NTI5 1447 aa32.38■■■□□ 2.77
EIF4A3-205ENST00000575957 CADPSQ9ULU8 1353 aa32.23■■■□□ 2.75
EIF4A3-205ENST00000575957 MRC2Q9UBG0 1479 aa32.16■■■□□ 2.74
EIF4A3-205ENST00000575957 WIZO95785 1651 aa32.11■■■□□ 2.73
EIF4A3-205ENST00000575957 WDR62O43379 1518 aa32.09■■■□□ 2.73
EIF4A3-205ENST00000575957 TRIM41Q8WV44 630 aa32.02■■■□□ 2.72
EIF4A3-205ENST00000575957 CEP164Q9UPV0 1460 aa31.95■■■□□ 2.7
EIF4A3-205ENST00000575957 FANCD2Q9BXW9 1451 aa31.88■■■□□ 2.69
EIF4A3-205ENST00000575957 CFTRP13569 1480 aa31.8■■■□□ 2.68
EIF4A3-205ENST00000575957 RSF1Q96T23 1441 aaPredicted RBP31.71■■■□□ 2.67
EIF4A3-205ENST00000575957 TOP2AP11388 1531 aaKnown RBP31.68■■■□□ 2.66
EIF4A3-205ENST00000575957 URB2Q14146 1524 aaKnown RBP31.65■■■□□ 2.66
EIF4A3-205ENST00000575957 OSCARQ8IYS5 282 aa31.62■■■□□ 2.65
EIF4A3-205ENST00000575957 PRDM2Q13029 1718 aa31.43■■■□□ 2.62
EIF4A3-205ENST00000575957 ZNF608Q9ULD9 1512 aaPredicted RBP31.34■■■□□ 2.61
EIF4A3-205ENST00000575957 CCDC88BA6NC98 1476 aa31.32■■■□□ 2.6
EIF4A3-205ENST00000575957 IFT140Q96RY7 1462 aa31.32■■■□□ 2.6
EIF4A3-205ENST00000575957 RIMBP3CA6NJZ7 1639 aa31.28■■■□□ 2.6
EIF4A3-205ENST00000575957 RIMBP3BA6NNM3 1639 aa31.28■■■□□ 2.6
EIF4A3-205ENST00000575957 RIMBP3Q9UFD9 1639 aa31.28■■■□□ 2.6
EIF4A3-205ENST00000575957 TOPBP1Q92547 1522 aa31.24■■■□□ 2.59
EIF4A3-205ENST00000575957 ARHGEF11O15085 1522 aa31.16■■■□□ 2.58
EIF4A3-205ENST00000575957 EIF4G3O43432 1585 aaKnown RBP31.13■■■□□ 2.57
EIF4A3-205ENST00000575957 ABCC8Q09428 1581 aa31.1■■■□□ 2.57
EIF4A3-205ENST00000575957 DNMBPQ6XZF7 1577 aa31.09■■■□□ 2.57
EIF4A3-205ENST00000575957 AQRO60306 1485 aaKnown RBP eCLIP31■■■□□ 2.552e-9■■■■□ 24.8
EIF4A3-205ENST00000575957 TARBP1Q13395 1621 aaKnown RBP30.99■■■□□ 2.55
EIF4A3-205ENST00000575957 CHD1O14646 1710 aa30.95■■■□□ 2.55
EIF4A3-205ENST00000575957 CYB5RLQ6IPT4 315 aa30.94■■■□□ 2.54
EIF4A3-205ENST00000575957 POLA1P09884 1462 aaPredicted RBP30.91■■■□□ 2.54
EIF4A3-205ENST00000575957 FBLN2P98095 1184 aa30.85■■■□□ 2.53
EIF4A3-205ENST00000575957 ARAP1Q96P48 1450 aa30.83■■■□□ 2.53
EIF4A3-205ENST00000575957 RAD54L2Q9Y4B4 1467 aa30.81■■■□□ 2.52
EIF4A3-205ENST00000575957 TDRD9Q8NDG6 1382 aaKnown RBP30.74■■■□□ 2.51
EIF4A3-205ENST00000575957 SOGA1O94964 1423 aa30.73■■■□□ 2.51
EIF4A3-205ENST00000575957 TRHP20396 242 aaPredicted RBP30.7■■■□□ 2.51
EIF4A3-205ENST00000575957 SNAPC4Q5SXM2 1469 aa30.67■■■□□ 2.5
EIF4A3-205ENST00000575957 FGD5Q6ZNL6 1462 aa30.66■■■□□ 2.5
EIF4A3-205ENST00000575957 WDR97A6NE52 1622 aa30.62■■■□□ 2.49
EIF4A3-205ENST00000575957 CLASP1Q7Z460 1538 aa30.6■■■□□ 2.49
EIF4A3-205ENST00000575957 CUX1P39880 1505 aa30.57■■■□□ 2.49
EIF4A3-205ENST00000575957 CHMP7Q8WUX9 453 aaPredicted RBP30.55■■■□□ 2.48
EIF4A3-205ENST00000575957 MAGI1Q96QZ7 1491 aaPredicted RBP30.55■■■□□ 2.48
EIF4A3-205ENST00000575957 SYNJ1O43426 1573 aa30.54■■■□□ 2.48
EIF4A3-205ENST00000575957 GRIN2BQ13224 1484 aa30.51■■■□□ 2.48
EIF4A3-205ENST00000575957 SYNJ2O15056 1496 aa30.46■■■□□ 2.47
EIF4A3-205ENST00000575957 PBRM1Q86U86 1689 aa30.37■■■□□ 2.45
EIF4A3-205ENST00000575957 GAPVD1Q14C86 1478 aa30.36■■■□□ 2.45
EIF4A3-205ENST00000575957 ABCA10Q8WWZ4 1543 aa30.28■■■□□ 2.44
EIF4A3-205ENST00000575957 ABCA5Q8WWZ7 1642 aa30.28■■■□□ 2.44
EIF4A3-205ENST00000575957 GRIN2AQ12879 1464 aa30.13■■■□□ 2.41
EIF4A3-205ENST00000575957 ERCC6L2Q5T890 1561 aa30.12■■■□□ 2.41
EIF4A3-205ENST00000575957 ADAMTS12P58397 1594 aa30.07■■■□□ 2.4
EIF4A3-205ENST00000575957 WRNQ14191 1432 aaPredicted RBP eCLIP30.07■■■□□ 2.4
EIF4A3-205ENST00000575957 AEBP2Q6ZN18 517 aaPredicted RBP30.06■■■□□ 2.4
EIF4A3-205ENST00000575957 CEP170Q5SW79 1584 aa30.05■■■□□ 2.4
EIF4A3-205ENST00000575957 NUP160Q12769 1436 aa30.05■■■□□ 2.4
EIF4A3-205ENST00000575957 SUPT5HO00267 1087 aaKnown RBP30.03■■■□□ 2.4
EIF4A3-205ENST00000575957 TOP2BQ02880 1626 aa29.97■■■□□ 2.39
EIF4A3-205ENST00000575957 BIVM-ERCC5R4GMW8 1640 aa29.97■■■□□ 2.39
EIF4A3-205ENST00000575957 FHAD1B1AJZ9 1412 aa29.96■■■□□ 2.39
EIF4A3-205ENST00000575957 SHROOM2Q13796 1616 aa29.95■■■□□ 2.38
EIF4A3-205ENST00000575957 ERICH3Q5RHP9 1530 aa29.88■■■□□ 2.37
EIF4A3-205ENST00000575957 PRG4Q92954 1404 aaPredicted RBP29.79■■■□□ 2.36
EIF4A3-205ENST00000575957 KIF13AQ9H1H9 1805 aa29.74■■■□□ 2.35
EIF4A3-205ENST00000575957 JPH4Q96JJ6 628 aa29.71■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms