RNA–Protein interactions for RNA: ENST00000575857.3

SLC12A4-215, Transcript of solute carrier family 12 member 4, humanhuman

TSL 3

Gene SLC12A4, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-215ENST00000575857 NISCHQ9Y2I1 1504 aa26.16■■□□□ 1.78
SLC12A4-215ENST00000575857 ABCC9O60706 1549 aa23.19■■□□□ 1.3
SLC12A4-215ENST00000575857 CCDC180Q9P1Z9 1646 aa23.15■■□□□ 1.3
SLC12A4-215ENST00000575857 DNAJC5BQ9UF47 199 aa21.98■■□□□ 1.11
SLC12A4-215ENST00000575857 RB1CC1Q8TDY2 1594 aa21.87■■□□□ 1.09
SLC12A4-215ENST00000575857 ZCCHC6Q5VYS8 1495 aaKnown RBP21.83■■□□□ 1.09
SLC12A4-215ENST00000575857 NACADO15069 1562 aa21.74■■□□□ 1.07
SLC12A4-215ENST00000575857 MYO15BQ96JP2 1530 aa21.71■■□□□ 1.07
SLC12A4-215ENST00000575857 DCAF8L2P0C7V8 631 aa21.71■■□□□ 1.07
SLC12A4-215ENST00000575857 DCAF1Q9Y4B6 1507 aa21.67■■□□□ 1.06
SLC12A4-215ENST00000575857 PABPN1Q86U42 306 aaKnown RBP eCLIP21.63■■□□□ 1.055e-7■□□□□ 8
SLC12A4-215ENST00000575857 UNC13AQ9UPW8 1703 aa21.37■■□□□ 1.01
SLC12A4-215ENST00000575857 BICRAQ9NZM4 1560 aa21.32■■□□□ 1
SLC12A4-215ENST00000575857 SCRIBQ14160 1630 aa21.12■□□□□ 0.97
SLC12A4-215ENST00000575857 CC2D2AQ9P2K1 1620 aa20.88■□□□□ 0.93
SLC12A4-215ENST00000575857 SHROOM4Q9ULL8 1493 aa20.88■□□□□ 0.93
SLC12A4-215ENST00000575857 CECR2Q9BXF3 1484 aa20.87■□□□□ 0.93
SLC12A4-215ENST00000575857 EIF4G1Q04637 1599 aaKnown RBP20.78■□□□□ 0.92
SLC12A4-215ENST00000575857 SMARCA4P51532 1647 aa20.24■□□□□ 0.83
SLC12A4-215ENST00000575857 BAZ1AQ9NRL2 1556 aaPredicted RBP20.24■□□□□ 0.83
SLC12A4-215ENST00000575857 DNAJC5Q9H3Z4 198 aa20.18■□□□□ 0.82
SLC12A4-215ENST00000575857 MROH2BQ7Z745 1585 aa20.17■□□□□ 0.82
SLC12A4-215ENST00000575857 ATAD2BQ9ULI0 1458 aa20.12■□□□□ 0.81
SLC12A4-215ENST00000575857 NCAPD3P42695 1498 aa20.1■□□□□ 0.81
SLC12A4-215ENST00000575857 PEG3Q9GZU2 1588 aa20.08■□□□□ 0.8
SLC12A4-215ENST00000575857 SMARCA2P51531 1590 aa20.07■□□□□ 0.8
SLC12A4-215ENST00000575857 RSF1Q96T23 1441 aaPredicted RBP20.02■□□□□ 0.79
SLC12A4-215ENST00000575857 HMGXB3Q12766 1538 aa19.98■□□□□ 0.79
SLC12A4-215ENST00000575857 ERCC6Q03468 1493 aa19.97■□□□□ 0.79
SLC12A4-215ENST00000575857 CUX2O14529 1486 aa19.93■□□□□ 0.78
SLC12A4-215ENST00000575857 WIZO95785 1651 aa19.93■□□□□ 0.78
SLC12A4-215ENST00000575857 BAZ1BQ9UIG0 1483 aaKnown RBP19.92■□□□□ 0.78
SLC12A4-215ENST00000575857 NESP48681 1621 aa19.91■□□□□ 0.78
SLC12A4-215ENST00000575857 TOP2AP11388 1531 aaKnown RBP19.74■□□□□ 0.75
SLC12A4-215ENST00000575857 THOC2Q8NI27 1593 aaKnown RBP19.64■□□□□ 0.73
SLC12A4-215ENST00000575857 LAMC3Q9Y6N6 1575 aa19.58■□□□□ 0.73
SLC12A4-215ENST00000575857 SUPT5HO00267 1087 aaKnown RBP19.55■□□□□ 0.72
SLC12A4-215ENST00000575857 KIF21AQ7Z4S6 1674 aa19.52■□□□□ 0.72
SLC12A4-215ENST00000575857 CCDC88BA6NC98 1476 aa19.52■□□□□ 0.72
SLC12A4-215ENST00000575857 CADPSQ9ULU8 1353 aa19.51■□□□□ 0.71
SLC12A4-215ENST00000575857 PDS5BQ9NTI5 1447 aa19.51■□□□□ 0.71
SLC12A4-215ENST00000575857 CFTRP13569 1480 aa19.43■□□□□ 0.7
SLC12A4-215ENST00000575857 MRC2Q9UBG0 1479 aa19.38■□□□□ 0.69
SLC12A4-215ENST00000575857 WDR62O43379 1518 aa19.32■□□□□ 0.68
SLC12A4-215ENST00000575857 TRIM41Q8WV44 630 aa19.31■□□□□ 0.68
SLC12A4-215ENST00000575857 CEP164Q9UPV0 1460 aa19.27■□□□□ 0.67
SLC12A4-215ENST00000575857 FANCD2Q9BXW9 1451 aa19.26■□□□□ 0.67
SLC12A4-215ENST00000575857 PRDM2Q13029 1718 aa19.2■□□□□ 0.66
SLC12A4-215ENST00000575857 URB2Q14146 1524 aaKnown RBP19.15■□□□□ 0.66
SLC12A4-215ENST00000575857 OSCARQ8IYS5 282 aa19.05■□□□□ 0.64
SLC12A4-215ENST00000575857 TOPBP1Q92547 1522 aa18.98■□□□□ 0.63
SLC12A4-215ENST00000575857 ZNF608Q9ULD9 1512 aaPredicted RBP18.96■□□□□ 0.63
SLC12A4-215ENST00000575857 ABCC8Q09428 1581 aa18.96■□□□□ 0.63
SLC12A4-215ENST00000575857 DNMBPQ6XZF7 1577 aa18.96■□□□□ 0.63
SLC12A4-215ENST00000575857 CUX1P39880 1505 aa18.9■□□□□ 0.62
SLC12A4-215ENST00000575857 IFT140Q96RY7 1462 aa18.87■□□□□ 0.61
SLC12A4-215ENST00000575857 POLA1P09884 1462 aaPredicted RBP18.84■□□□□ 0.61
SLC12A4-215ENST00000575857 WRNQ14191 1432 aaPredicted RBP eCLIP18.83■□□□□ 0.6
SLC12A4-215ENST00000575857 RIMBP3CA6NJZ7 1639 aa18.82■□□□□ 0.6
SLC12A4-215ENST00000575857 RIMBP3BA6NNM3 1639 aa18.82■□□□□ 0.6
SLC12A4-215ENST00000575857 RIMBP3Q9UFD9 1639 aa18.82■□□□□ 0.6
SLC12A4-215ENST00000575857 FGD5Q6ZNL6 1462 aa18.8■□□□□ 0.6
SLC12A4-215ENST00000575857 SYNJ1O43426 1573 aa18.78■□□□□ 0.6
SLC12A4-215ENST00000575857 TOP2BQ02880 1626 aa18.77■□□□□ 0.6
SLC12A4-215ENST00000575857 TARBP1Q13395 1621 aaKnown RBP18.77■□□□□ 0.6
SLC12A4-215ENST00000575857 AQRO60306 1485 aaKnown RBP eCLIP18.77■□□□□ 0.591e-7■■■■□ 19.7
SLC12A4-215ENST00000575857 EIF4G3O43432 1585 aaKnown RBP18.76■□□□□ 0.59
SLC12A4-215ENST00000575857 BIVM-ERCC5R4GMW8 1640 aa18.76■□□□□ 0.59
SLC12A4-215ENST00000575857 ARHGEF11O15085 1522 aa18.75■□□□□ 0.59
SLC12A4-215ENST00000575857 RAD54L2Q9Y4B4 1467 aa18.75■□□□□ 0.59
SLC12A4-215ENST00000575857 SOGA1O94964 1423 aa18.74■□□□□ 0.59
SLC12A4-215ENST00000575857 CYB5RLQ6IPT4 315 aa18.68■□□□□ 0.58
SLC12A4-215ENST00000575857 FBLN2P98095 1184 aa18.67■□□□□ 0.58
SLC12A4-215ENST00000575857 ABCA10Q8WWZ4 1543 aa18.64■□□□□ 0.58
SLC12A4-215ENST00000575857 TDRD9Q8NDG6 1382 aaKnown RBP18.63■□□□□ 0.57
SLC12A4-215ENST00000575857 WDR97A6NE52 1622 aa18.63■□□□□ 0.57
SLC12A4-215ENST00000575857 CHD1O14646 1710 aa18.63■□□□□ 0.57
SLC12A4-215ENST00000575857 ARAP1Q96P48 1450 aa18.59■□□□□ 0.57
SLC12A4-215ENST00000575857 SNAPC4Q5SXM2 1469 aa18.54■□□□□ 0.56
SLC12A4-215ENST00000575857 ABCA5Q8WWZ7 1642 aa18.54■□□□□ 0.56
SLC12A4-215ENST00000575857 GAPVD1Q14C86 1478 aa18.52■□□□□ 0.56
SLC12A4-215ENST00000575857 TRHP20396 242 aaPredicted RBP18.51■□□□□ 0.55
SLC12A4-215ENST00000575857 GRIN2BQ13224 1484 aa18.51■□□□□ 0.55
SLC12A4-215ENST00000575857 CHMP7Q8WUX9 453 aaPredicted RBP18.46■□□□□ 0.55
SLC12A4-215ENST00000575857 MAGI1Q96QZ7 1491 aaPredicted RBP18.45■□□□□ 0.54
SLC12A4-215ENST00000575857 CLASP1Q7Z460 1538 aa18.44■□□□□ 0.54
SLC12A4-215ENST00000575857 PBRM1Q86U86 1689 aa18.43■□□□□ 0.54
SLC12A4-215ENST00000575857 KIF27Q86VH2 1401 aa18.41■□□□□ 0.54
SLC12A4-215ENST00000575857 ERICH3Q5RHP9 1530 aa18.4■□□□□ 0.54
SLC12A4-215ENST00000575857 CHIC1Q5VXU3 224 aa18.4■□□□□ 0.54
SLC12A4-215ENST00000575857 SYNJ2O15056 1496 aa18.37■□□□□ 0.53
SLC12A4-215ENST00000575857 IGF1RP08069 1367 aa18.36■□□□□ 0.53
SLC12A4-215ENST00000575857 ADAMTS12P58397 1594 aa18.35■□□□□ 0.53
SLC12A4-215ENST00000575857 RUSC2Q8N2Y8 1516 aa18.33■□□□□ 0.53
SLC12A4-215ENST00000575857 FHAD1B1AJZ9 1412 aa18.33■□□□□ 0.53
SLC12A4-215ENST00000575857 GRIN2AQ12879 1464 aa18.27■□□□□ 0.52
SLC12A4-215ENST00000575857 ERCC6L2Q5T890 1561 aa18.24■□□□□ 0.51
SLC12A4-215ENST00000575857 CUL7Q14999 1698 aa18.24■□□□□ 0.51
SLC12A4-215ENST00000575857 CARMIL1Q5VZK9 1371 aa18.22■□□□□ 0.51
SLC12A4-215ENST00000575857 NUP160Q12769 1436 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms