RNA–Protein interactions for RNA: ENST00000575796.1

SPNS3-205, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 5

Gene SPNS3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-205ENST00000575796 NISCHQ9Y2I1 1504 aa30.9■■■□□ 2.54
SPNS3-205ENST00000575796 CCDC180Q9P1Z9 1646 aa27.41■■□□□ 1.98
SPNS3-205ENST00000575796 ABCC9O60706 1549 aa26.81■■□□□ 1.88
SPNS3-205ENST00000575796 DCAF8L2P0C7V8 631 aa25.79■■□□□ 1.72
SPNS3-205ENST00000575796 ZCCHC6Q5VYS8 1495 aaKnown RBP25.79■■□□□ 1.72
SPNS3-205ENST00000575796 RB1CC1Q8TDY2 1594 aa25.74■■□□□ 1.71
SPNS3-205ENST00000575796 NACADO15069 1562 aa25.73■■□□□ 1.71
SPNS3-205ENST00000575796 MYO15BQ96JP2 1530 aa25.56■■□□□ 1.68
SPNS3-205ENST00000575796 DCAF1Q9Y4B6 1507 aa25.51■■□□□ 1.67
SPNS3-205ENST00000575796 UNC13AQ9UPW8 1703 aa25.28■■□□□ 1.64
SPNS3-205ENST00000575796 SCRIBQ14160 1630 aa25.12■■□□□ 1.61
SPNS3-205ENST00000575796 PABPN1Q86U42 306 aaKnown RBP eCLIP25.07■■□□□ 1.6
SPNS3-205ENST00000575796 BICRAQ9NZM4 1560 aa25.05■■□□□ 1.6
SPNS3-205ENST00000575796 SHROOM4Q9ULL8 1493 aa24.64■■□□□ 1.53
SPNS3-205ENST00000575796 DNAJC5BQ9UF47 199 aa24.54■■□□□ 1.52
SPNS3-205ENST00000575796 EIF4G1Q04637 1599 aaKnown RBP24.34■■□□□ 1.49
SPNS3-205ENST00000575796 CC2D2AQ9P2K1 1620 aa24.24■■□□□ 1.47
SPNS3-205ENST00000575796 CECR2Q9BXF3 1484 aa24.13■■□□□ 1.45
SPNS3-205ENST00000575796 SMARCA4P51532 1647 aa23.99■■□□□ 1.43
SPNS3-205ENST00000575796 BAZ1AQ9NRL2 1556 aaPredicted RBP23.92■■□□□ 1.42
SPNS3-205ENST00000575796 MROH2BQ7Z745 1585 aa23.87■■□□□ 1.41
SPNS3-205ENST00000575796 ATAD2BQ9ULI0 1458 aa23.81■■□□□ 1.4
SPNS3-205ENST00000575796 SMARCA2P51531 1590 aa23.74■■□□□ 1.39
SPNS3-205ENST00000575796 NCAPD3P42695 1498 aa23.74■■□□□ 1.39
SPNS3-205ENST00000575796 PEG3Q9GZU2 1588 aa23.7■■□□□ 1.38
SPNS3-205ENST00000575796 HMGXB3Q12766 1538 aa23.64■■□□□ 1.38
SPNS3-205ENST00000575796 WIZO95785 1651 aa23.64■■□□□ 1.37
SPNS3-205ENST00000575796 BAZ1BQ9UIG0 1483 aaKnown RBP23.61■■□□□ 1.37
SPNS3-205ENST00000575796 RSF1Q96T23 1441 aaPredicted RBP23.59■■□□□ 1.37
SPNS3-205ENST00000575796 TOP2AP11388 1531 aaKnown RBP23.33■■□□□ 1.33
SPNS3-205ENST00000575796 NESP48681 1621 aa23.26■■□□□ 1.31
SPNS3-205ENST00000575796 LAMC3Q9Y6N6 1575 aa23.1■■□□□ 1.29
SPNS3-205ENST00000575796 SUPT5HO00267 1087 aaKnown RBP23.09■■□□□ 1.29
SPNS3-205ENST00000575796 CCDC88BA6NC98 1476 aa23.07■■□□□ 1.28
SPNS3-205ENST00000575796 CADPSQ9ULU8 1353 aa23.05■■□□□ 1.28
SPNS3-205ENST00000575796 ERCC6Q03468 1493 aa23.04■■□□□ 1.28
SPNS3-205ENST00000575796 KIF21AQ7Z4S6 1674 aa22.98■■□□□ 1.27
SPNS3-205ENST00000575796 CFTRP13569 1480 aa22.96■■□□□ 1.27
SPNS3-205ENST00000575796 PDS5BQ9NTI5 1447 aa22.91■■□□□ 1.26
SPNS3-205ENST00000575796 THOC2Q8NI27 1593 aaKnown RBP22.86■■□□□ 1.25
SPNS3-205ENST00000575796 PRDM2Q13029 1718 aa22.83■■□□□ 1.25
SPNS3-205ENST00000575796 FANCD2Q9BXW9 1451 aa22.83■■□□□ 1.25
SPNS3-205ENST00000575796 CEP164Q9UPV0 1460 aa22.78■■□□□ 1.24
SPNS3-205ENST00000575796 MRC2Q9UBG0 1479 aa22.73■■□□□ 1.23
SPNS3-205ENST00000575796 CUX2O14529 1486 aa22.73■■□□□ 1.23
SPNS3-205ENST00000575796 WDR62O43379 1518 aa22.67■■□□□ 1.22
SPNS3-205ENST00000575796 URB2Q14146 1524 aaKnown RBP22.63■■□□□ 1.21
SPNS3-205ENST00000575796 TOPBP1Q92547 1522 aa22.49■■□□□ 1.19
SPNS3-205ENST00000575796 DNMBPQ6XZF7 1577 aa22.46■■□□□ 1.19
SPNS3-205ENST00000575796 CUX1P39880 1505 aa22.39■■□□□ 1.17
SPNS3-205ENST00000575796 ABCC8Q09428 1581 aa22.38■■□□□ 1.17
SPNS3-205ENST00000575796 POLA1P09884 1462 aaPredicted RBP22.31■■□□□ 1.16
SPNS3-205ENST00000575796 FGD5Q6ZNL6 1462 aa22.28■■□□□ 1.16
SPNS3-205ENST00000575796 IFT140Q96RY7 1462 aa22.28■■□□□ 1.16
SPNS3-205ENST00000575796 TARBP1Q13395 1621 aaKnown RBP22.26■■□□□ 1.15
SPNS3-205ENST00000575796 ZNF608Q9ULD9 1512 aaPredicted RBP22.26■■□□□ 1.15
SPNS3-205ENST00000575796 RAD54L2Q9Y4B4 1467 aa22.24■■□□□ 1.15
SPNS3-205ENST00000575796 SYNJ1O43426 1573 aa22.24■■□□□ 1.15
SPNS3-205ENST00000575796 WRNQ14191 1432 aaPredicted RBP eCLIP22.22■■□□□ 1.15
SPNS3-205ENST00000575796 BIVM-ERCC5R4GMW8 1640 aa22.19■■□□□ 1.14
SPNS3-205ENST00000575796 TOP2BQ02880 1626 aa22.18■■□□□ 1.14
SPNS3-205ENST00000575796 SOGA1O94964 1423 aa22.18■■□□□ 1.14
SPNS3-205ENST00000575796 EIF4G3O43432 1585 aaKnown RBP22.16■■□□□ 1.14
SPNS3-205ENST00000575796 AQRO60306 1485 aaKnown RBP eCLIP22.12■■□□□ 1.13
SPNS3-205ENST00000575796 WDR97A6NE52 1622 aa22.12■■□□□ 1.13
SPNS3-205ENST00000575796 TDRD9Q8NDG6 1382 aaKnown RBP22.08■■□□□ 1.12
SPNS3-205ENST00000575796 ABCA10Q8WWZ4 1543 aa22.02■■□□□ 1.12
SPNS3-205ENST00000575796 ABCA5Q8WWZ7 1642 aa21.98■■□□□ 1.11
SPNS3-205ENST00000575796 PBRM1Q86U86 1689 aa21.95■■□□□ 1.1
SPNS3-205ENST00000575796 GAPVD1Q14C86 1478 aa21.94■■□□□ 1.1
SPNS3-205ENST00000575796 DNAJC5Q9H3Z4 198 aa21.92■■□□□ 1.1
SPNS3-205ENST00000575796 SNAPC4Q5SXM2 1469 aa21.91■■□□□ 1.1
SPNS3-205ENST00000575796 GRIN2BQ13224 1484 aa21.9■■□□□ 1.1
SPNS3-205ENST00000575796 CHD1O14646 1710 aa21.89■■□□□ 1.09
SPNS3-205ENST00000575796 MAGI1Q96QZ7 1491 aaPredicted RBP21.83■■□□□ 1.08
SPNS3-205ENST00000575796 FBLN2P98095 1184 aa21.8■■□□□ 1.08
SPNS3-205ENST00000575796 OSCARQ8IYS5 282 aa21.77■■□□□ 1.08
SPNS3-205ENST00000575796 ADAMTS12P58397 1594 aa21.77■■□□□ 1.08
SPNS3-205ENST00000575796 SYNJ2O15056 1496 aa21.75■■□□□ 1.07
SPNS3-205ENST00000575796 ERICH3Q5RHP9 1530 aa21.75■■□□□ 1.07
SPNS3-205ENST00000575796 TRIM41Q8WV44 630 aa21.73■■□□□ 1.07
SPNS3-205ENST00000575796 KIF27Q86VH2 1401 aa21.72■■□□□ 1.07
SPNS3-205ENST00000575796 CHMP7Q8WUX9 453 aaPredicted RBP21.71■■□□□ 1.07
SPNS3-205ENST00000575796 RUSC2Q8N2Y8 1516 aa21.68■■□□□ 1.06
SPNS3-205ENST00000575796 FHAD1B1AJZ9 1412 aa21.66■■□□□ 1.06
SPNS3-205ENST00000575796 GRIN2AQ12879 1464 aa21.65■■□□□ 1.06
SPNS3-205ENST00000575796 IGF1RP08069 1367 aa21.64■■□□□ 1.06
SPNS3-205ENST00000575796 CLASP1Q7Z460 1538 aa21.61■■□□□ 1.05
SPNS3-205ENST00000575796 CEP170Q5SW79 1584 aa21.59■■□□□ 1.05
SPNS3-205ENST00000575796 CHIC1Q5VXU3 224 aa21.58■■□□□ 1.05
SPNS3-205ENST00000575796 CUL7Q14999 1698 aa21.58■■□□□ 1.05
SPNS3-205ENST00000575796 NUP160Q12769 1436 aa21.55■■□□□ 1.04
SPNS3-205ENST00000575796 RIMBP3CA6NJZ7 1639 aa21.53■■□□□ 1.04
SPNS3-205ENST00000575796 RIMBP3BA6NNM3 1639 aa21.53■■□□□ 1.04
SPNS3-205ENST00000575796 RIMBP3Q9UFD9 1639 aa21.53■■□□□ 1.04
SPNS3-205ENST00000575796 ARHGEF11O15085 1522 aa21.51■■□□□ 1.03
SPNS3-205ENST00000575796 CARMIL1Q5VZK9 1371 aa21.5■■□□□ 1.03
SPNS3-205ENST00000575796 ERCC6L2Q5T890 1561 aa21.4■■□□□ 1.02
SPNS3-205ENST00000575796 RAPGEF2Q9Y4G8 1499 aa21.39■■□□□ 1.02
SPNS3-205ENST00000575796 SHROOM2Q13796 1616 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms