RNA–Protein interactions for RNA: ENST00000575672.1

TFAP4-207, Transcript of transcription factor AP-4, humanhuman

Gene TFAP4, Length 1,613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP4-207ENST00000575672 NISCHQ9Y2I1 1504 aa51.17■■■■■ 5.78
TFAP4-207ENST00000575672 CCDC180Q9P1Z9 1646 aa44.89■■■■■ 4.78
TFAP4-207ENST00000575672 ZCCHC6Q5VYS8 1495 aaKnown RBP42.93■■■■■ 4.46
TFAP4-207ENST00000575672 ABCC9O60706 1549 aa42.59■■■■■ 4.41
TFAP4-207ENST00000575672 DCAF1Q9Y4B6 1507 aa42.39■■■■■ 4.38
TFAP4-207ENST00000575672 DCAF8L2P0C7V8 631 aa42.2■■■■■ 4.35
TFAP4-207ENST00000575672 MYO15BQ96JP2 1530 aa42.04■■■■■ 4.32
TFAP4-207ENST00000575672 NACADO15069 1562 aa41.85■■■■■ 4.29
TFAP4-207ENST00000575672 RB1CC1Q8TDY2 1594 aa41.57■■■■■ 4.25
TFAP4-207ENST00000575672 SHROOM4Q9ULL8 1493 aa41.33■■■■■ 4.21
TFAP4-207ENST00000575672 SCRIBQ14160 1630 aa41.11■■■■■ 4.17
TFAP4-207ENST00000575672 UNC13AQ9UPW8 1703 aa40.69■■■■■ 4.1
TFAP4-207ENST00000575672 BICRAQ9NZM4 1560 aa40.27■■■■■ 4.04
TFAP4-207ENST00000575672 PABPN1Q86U42 306 aaKnown RBP eCLIP40.03■■■■■ 4
TFAP4-207ENST00000575672 CECR2Q9BXF3 1484 aa39.72■■■■□ 3.95
TFAP4-207ENST00000575672 SUPT5HO00267 1087 aaKnown RBP39.59■■■■□ 3.93
TFAP4-207ENST00000575672 BAZ1AQ9NRL2 1556 aaPredicted RBP39.58■■■■□ 3.93
TFAP4-207ENST00000575672 RSF1Q96T23 1441 aaPredicted RBP39.52■■■■□ 3.92
TFAP4-207ENST00000575672 MROH2BQ7Z745 1585 aa39.48■■■■□ 3.91
TFAP4-207ENST00000575672 SMARCA4P51532 1647 aa39.43■■■■□ 3.9
TFAP4-207ENST00000575672 WIZO95785 1651 aa39.14■■■■□ 3.86
TFAP4-207ENST00000575672 EIF4G1Q04637 1599 aaKnown RBP39.09■■■■□ 3.85
TFAP4-207ENST00000575672 PEG3Q9GZU2 1588 aa39■■■■□ 3.83
TFAP4-207ENST00000575672 SMARCA2P51531 1590 aa38.87■■■■□ 3.81
TFAP4-207ENST00000575672 ATAD2BQ9ULI0 1458 aa38.84■■■■□ 3.81
TFAP4-207ENST00000575672 TOP2AP11388 1531 aaKnown RBP38.8■■■■□ 3.8
TFAP4-207ENST00000575672 BAZ1BQ9UIG0 1483 aaKnown RBP38.61■■■■□ 3.77
TFAP4-207ENST00000575672 CC2D2AQ9P2K1 1620 aa38.59■■■■□ 3.77
TFAP4-207ENST00000575672 NCAPD3P42695 1498 aa38.58■■■■□ 3.77
TFAP4-207ENST00000575672 HMGXB3Q12766 1538 aa38.55■■■■□ 3.76
TFAP4-207ENST00000575672 CCDC88BA6NC98 1476 aa38.33■■■■□ 3.73
TFAP4-207ENST00000575672 DNAJC5BQ9UF47 199 aa37.79■■■■□ 3.64
TFAP4-207ENST00000575672 CHIC1Q5VXU3 224 aa37.76■■■■□ 3.63
TFAP4-207ENST00000575672 CFTRP13569 1480 aa37.62■■■■□ 3.61
TFAP4-207ENST00000575672 CADPSQ9ULU8 1353 aa37.55■■■■□ 3.6
TFAP4-207ENST00000575672 PRDM2Q13029 1718 aa37.5■■■■□ 3.59
TFAP4-207ENST00000575672 ABCC8Q09428 1581 aa37.38■■■■□ 3.57
TFAP4-207ENST00000575672 LAMC3Q9Y6N6 1575 aa37.37■■■■□ 3.57
TFAP4-207ENST00000575672 TRIM41Q8WV44 630 aa37.32■■■■□ 3.56
TFAP4-207ENST00000575672 NESP48681 1621 aa37.28■■■■□ 3.56
TFAP4-207ENST00000575672 WRNQ14191 1432 aaPredicted RBP eCLIP37.23■■■■□ 3.55
TFAP4-207ENST00000575672 FANCD2Q9BXW9 1451 aa37.13■■■■□ 3.53
TFAP4-207ENST00000575672 SYNJ1O43426 1573 aa37.09■■■■□ 3.53
TFAP4-207ENST00000575672 PDS5BQ9NTI5 1447 aa37.06■■■■□ 3.52
TFAP4-207ENST00000575672 TOP2BQ02880 1626 aa37.01■■■■□ 3.51
TFAP4-207ENST00000575672 BIVM-ERCC5R4GMW8 1640 aa37.01■■■■□ 3.51
TFAP4-207ENST00000575672 CEP164Q9UPV0 1460 aa36.96■■■■□ 3.51
TFAP4-207ENST00000575672 CUX1P39880 1505 aa36.95■■■■□ 3.51
TFAP4-207ENST00000575672 KIF21AQ7Z4S6 1674 aa36.9■■■■□ 3.5
TFAP4-207ENST00000575672 DNMBPQ6XZF7 1577 aa36.79■■■■□ 3.48
TFAP4-207ENST00000575672 TOPBP1Q92547 1522 aa36.7■■■■□ 3.47
TFAP4-207ENST00000575672 URB2Q14146 1524 aaKnown RBP36.68■■■■□ 3.46
TFAP4-207ENST00000575672 FGD5Q6ZNL6 1462 aa36.61■■■■□ 3.45
TFAP4-207ENST00000575672 MRC2Q9UBG0 1479 aa36.61■■■■□ 3.45
TFAP4-207ENST00000575672 ERCC6Q03468 1493 aa36.6■■■■□ 3.45
TFAP4-207ENST00000575672 SOGA1O94964 1423 aa36.58■■■■□ 3.45
TFAP4-207ENST00000575672 EEA1Q15075 1411 aa36.58■■■■□ 3.45
TFAP4-207ENST00000575672 FAM9AQ8IZU1 332 aaPredicted RBP36.54■■■■□ 3.44
TFAP4-207ENST00000575672 POLA1P09884 1462 aaPredicted RBP36.49■■■■□ 3.43
TFAP4-207ENST00000575672 RUSC2Q8N2Y8 1516 aa36.45■■■■□ 3.43
TFAP4-207ENST00000575672 WDR62O43379 1518 aa36.45■■■■□ 3.43
TFAP4-207ENST00000575672 THOC2Q8NI27 1593 aaKnown RBP36.41■■■■□ 3.42
TFAP4-207ENST00000575672 KIF27Q86VH2 1401 aa36.34■■■■□ 3.41
TFAP4-207ENST00000575672 RAD54L2Q9Y4B4 1467 aa36.31■■■■□ 3.4
TFAP4-207ENST00000575672 ABCA10Q8WWZ4 1543 aa36.31■■■■□ 3.4
TFAP4-207ENST00000575672 CSRNP3Q8WYN3 585 aa36.3■■■■□ 3.4
TFAP4-207ENST00000575672 CUX2O14529 1486 aa36.29■■■■□ 3.4
TFAP4-207ENST00000575672 WDR97A6NE52 1622 aa36.26■■■■□ 3.4
TFAP4-207ENST00000575672 LOC105371045A0A1W2PR82 267 aa36.23■■■■□ 3.39
TFAP4-207ENST00000575672 TARBP1Q13395 1621 aaKnown RBP36.2■■■■□ 3.39
TFAP4-207ENST00000575672 IFT140Q96RY7 1462 aa36.12■■■■□ 3.37
TFAP4-207ENST00000575672 KIF21BO75037 1637 aa36.11■■■■□ 3.37
TFAP4-207ENST00000575672 ABCA5Q8WWZ7 1642 aa36.06■■■■□ 3.36
TFAP4-207ENST00000575672 GOLGA3Q08378 1498 aa36.01■■■■□ 3.36
TFAP4-207ENST00000575672 IGF1RP08069 1367 aa36■■■■□ 3.35
TFAP4-207ENST00000575672 PRXQ9BXM0 1461 aa35.99■■■■□ 3.35
TFAP4-207ENST00000575672 TDRD9Q8NDG6 1382 aaKnown RBP35.98■■■■□ 3.35
TFAP4-207ENST00000575672 EHMT2Q96KQ7 1210 aa35.97■■■■□ 3.35
TFAP4-207ENST00000575672 GAPVD1Q14C86 1478 aa35.96■■■■□ 3.35
TFAP4-207ENST00000575672 ERICH3Q5RHP9 1530 aa35.94■■■■□ 3.34
TFAP4-207ENST00000575672 RAPGEF2Q9Y4G8 1499 aa35.89■■■■□ 3.34
TFAP4-207ENST00000575672 CUL7Q14999 1698 aa35.87■■■■□ 3.33
TFAP4-207ENST00000575672 ZNF608Q9ULD9 1512 aaPredicted RBP35.85■■■■□ 3.33
TFAP4-207ENST00000575672 PBRM1Q86U86 1689 aa35.83■■■■□ 3.33
TFAP4-207ENST00000575672 CARMIL1Q5VZK9 1371 aa35.82■■■■□ 3.33
TFAP4-207ENST00000575672 AQRO60306 1485 aaKnown RBP eCLIP35.82■■■■□ 3.33
TFAP4-207ENST00000575672 TNIKQ9UKE5 1360 aa35.81■■■■□ 3.32
TFAP4-207ENST00000575672 EIF4G3O43432 1585 aaKnown RBP35.79■■■■□ 3.32
TFAP4-207ENST00000575672 UBTFP17480 764 aaKnown RBP35.77■■■■□ 3.32
TFAP4-207ENST00000575672 GRIN2BQ13224 1484 aa35.76■■■■□ 3.32
TFAP4-207ENST00000575672 ADAMTS12P58397 1594 aa35.62■■■■□ 3.29
TFAP4-207ENST00000575672 FHAD1B1AJZ9 1412 aa35.59■■■■□ 3.29
TFAP4-207ENST00000575672 CEP162Q5TB80 1403 aa35.57■■■■□ 3.28
TFAP4-207ENST00000575672 SNAPC4Q5SXM2 1469 aa35.54■■■■□ 3.28
TFAP4-207ENST00000575672 MAGI1Q96QZ7 1491 aaPredicted RBP35.52■■■■□ 3.28
TFAP4-207ENST00000575672 CTTNBP2Q8WZ74 1663 aa35.4■■■■□ 3.26
TFAP4-207ENST00000575672 CLIP1P30622 1438 aa35.39■■■■□ 3.26
TFAP4-207ENST00000575672 SYNJ2O15056 1496 aa35.36■■■■□ 3.25
TFAP4-207ENST00000575672 GRIN2AQ12879 1464 aa35.32■■■■□ 3.24
TFAP4-207ENST00000575672 CHMP7Q8WUX9 453 aaPredicted RBP35.23■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms