RNA–Protein interactions for RNA: ENST00000575643.1

PSMB6-204, Transcript of proteasome subunit beta 6, humanhuman

TSL 2

Gene PSMB6, Length 666 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB6-204ENST00000575643 NISCHQ9Y2I1 1504 aa33.22■■■□□ 2.91
PSMB6-204ENST00000575643 CCDC180Q9P1Z9 1646 aa29.82■■■□□ 2.36
PSMB6-204ENST00000575643 ABCC9O60706 1549 aa29.55■■■□□ 2.32
PSMB6-204ENST00000575643 RB1CC1Q8TDY2 1594 aa28.21■■■□□ 2.11
PSMB6-204ENST00000575643 NACADO15069 1562 aa28.04■■■□□ 2.08
PSMB6-204ENST00000575643 DCAF8L2P0C7V8 631 aa27.77■■■□□ 2.04
PSMB6-204ENST00000575643 UNC13AQ9UPW8 1703 aa27.74■■■□□ 2.03
PSMB6-204ENST00000575643 MYO15BQ96JP2 1530 aa27.7■■■□□ 2.02
PSMB6-204ENST00000575643 ZCCHC6Q5VYS8 1495 aaKnown RBP27.64■■■□□ 2.01
PSMB6-204ENST00000575643 DNAJC5BQ9UF47 199 aa27.46■■□□□ 1.99
PSMB6-204ENST00000575643 BICRAQ9NZM4 1560 aa27.46■■□□□ 1.99
PSMB6-204ENST00000575643 PABPN1Q86U42 306 aaKnown RBP eCLIP27.45■■□□□ 1.98
PSMB6-204ENST00000575643 DCAF1Q9Y4B6 1507 aa27.43■■□□□ 1.98
PSMB6-204ENST00000575643 SCRIBQ14160 1630 aa27.21■■□□□ 1.95
PSMB6-204ENST00000575643 SHROOM4Q9ULL8 1493 aa27.01■■□□□ 1.91
PSMB6-204ENST00000575643 CC2D2AQ9P2K1 1620 aa26.75■■□□□ 1.87
PSMB6-204ENST00000575643 EIF4G1Q04637 1599 aaKnown RBP26.73■■□□□ 1.87
PSMB6-204ENST00000575643 CECR2Q9BXF3 1484 aa26.57■■□□□ 1.84
PSMB6-204ENST00000575643 SMARCA4P51532 1647 aa25.95■■□□□ 1.74
PSMB6-204ENST00000575643 NCAPD3P42695 1498 aa25.84■■□□□ 1.73
PSMB6-204ENST00000575643 ATAD2BQ9ULI0 1458 aa25.84■■□□□ 1.73
PSMB6-204ENST00000575643 SMARCA2P51531 1590 aa25.78■■□□□ 1.72
PSMB6-204ENST00000575643 BAZ1AQ9NRL2 1556 aaPredicted RBP25.78■■□□□ 1.72
PSMB6-204ENST00000575643 HMGXB3Q12766 1538 aa25.77■■□□□ 1.72
PSMB6-204ENST00000575643 PEG3Q9GZU2 1588 aa25.65■■□□□ 1.7
PSMB6-204ENST00000575643 MROH2BQ7Z745 1585 aa25.64■■□□□ 1.69
PSMB6-204ENST00000575643 BAZ1BQ9UIG0 1483 aaKnown RBP25.61■■□□□ 1.69
PSMB6-204ENST00000575643 NESP48681 1621 aa25.48■■□□□ 1.67
PSMB6-204ENST00000575643 ERCC6Q03468 1493 aa25.47■■□□□ 1.67
PSMB6-204ENST00000575643 WIZO95785 1651 aa25.39■■□□□ 1.65
PSMB6-204ENST00000575643 CUX2O14529 1486 aa25.36■■□□□ 1.65
PSMB6-204ENST00000575643 LAMC3Q9Y6N6 1575 aa25.3■■□□□ 1.64
PSMB6-204ENST00000575643 THOC2Q8NI27 1593 aaKnown RBP25.26■■□□□ 1.63
PSMB6-204ENST00000575643 KIF21AQ7Z4S6 1674 aa25.24■■□□□ 1.63
PSMB6-204ENST00000575643 RSF1Q96T23 1441 aaPredicted RBP25.12■■□□□ 1.61
PSMB6-204ENST00000575643 TOP2AP11388 1531 aaKnown RBP25.06■■□□□ 1.6
PSMB6-204ENST00000575643 PDS5BQ9NTI5 1447 aa25.04■■□□□ 1.6
PSMB6-204ENST00000575643 CADPSQ9ULU8 1353 aa25.04■■□□□ 1.6
PSMB6-204ENST00000575643 DNAJC5Q9H3Z4 198 aa24.99■■□□□ 1.59
PSMB6-204ENST00000575643 MRC2Q9UBG0 1479 aa24.91■■□□□ 1.58
PSMB6-204ENST00000575643 WDR62O43379 1518 aa24.89■■□□□ 1.57
PSMB6-204ENST00000575643 CFTRP13569 1480 aa24.85■■□□□ 1.57
PSMB6-204ENST00000575643 CEP164Q9UPV0 1460 aa24.85■■□□□ 1.57
PSMB6-204ENST00000575643 FANCD2Q9BXW9 1451 aa24.83■■□□□ 1.56
PSMB6-204ENST00000575643 PRDM2Q13029 1718 aa24.8■■□□□ 1.56
PSMB6-204ENST00000575643 CCDC88BA6NC98 1476 aa24.7■■□□□ 1.54
PSMB6-204ENST00000575643 URB2Q14146 1524 aaKnown RBP24.66■■□□□ 1.54
PSMB6-204ENST00000575643 TOPBP1Q92547 1522 aa24.4■■□□□ 1.5
PSMB6-204ENST00000575643 DNMBPQ6XZF7 1577 aa24.36■■□□□ 1.49
PSMB6-204ENST00000575643 ZNF608Q9ULD9 1512 aaPredicted RBP24.32■■□□□ 1.48
PSMB6-204ENST00000575643 IFT140Q96RY7 1462 aa24.31■■□□□ 1.48
PSMB6-204ENST00000575643 EIF4G3O43432 1585 aaKnown RBP24.27■■□□□ 1.48
PSMB6-204ENST00000575643 ABCC8Q09428 1581 aa24.25■■□□□ 1.47
PSMB6-204ENST00000575643 TARBP1Q13395 1621 aaKnown RBP24.22■■□□□ 1.47
PSMB6-204ENST00000575643 POLA1P09884 1462 aaPredicted RBP24.18■■□□□ 1.46
PSMB6-204ENST00000575643 CUX1P39880 1505 aa24.1■■□□□ 1.45
PSMB6-204ENST00000575643 CHD1O14646 1710 aa24.07■■□□□ 1.44
PSMB6-204ENST00000575643 OSCARQ8IYS5 282 aa24.07■■□□□ 1.44
PSMB6-204ENST00000575643 AQRO60306 1485 aaKnown RBP eCLIP24.07■■□□□ 1.44
PSMB6-204ENST00000575643 RAD54L2Q9Y4B4 1467 aa24.07■■□□□ 1.44
PSMB6-204ENST00000575643 SUPT5HO00267 1087 aaKnown RBP24.06■■□□□ 1.44
PSMB6-204ENST00000575643 FGD5Q6ZNL6 1462 aa24.06■■□□□ 1.44
PSMB6-204ENST00000575643 TRIM41Q8WV44 630 aa24.03■■□□□ 1.44
PSMB6-204ENST00000575643 WDR97A6NE52 1622 aa24■■□□□ 1.43
PSMB6-204ENST00000575643 RIMBP3CA6NJZ7 1639 aa23.99■■□□□ 1.43
PSMB6-204ENST00000575643 RIMBP3BA6NNM3 1639 aa23.99■■□□□ 1.43
PSMB6-204ENST00000575643 RIMBP3Q9UFD9 1639 aa23.99■■□□□ 1.43
PSMB6-204ENST00000575643 SOGA1O94964 1423 aa23.97■■□□□ 1.43
PSMB6-204ENST00000575643 TDRD9Q8NDG6 1382 aaKnown RBP23.91■■□□□ 1.42
PSMB6-204ENST00000575643 ARHGEF11O15085 1522 aa23.89■■□□□ 1.42
PSMB6-204ENST00000575643 SNAPC4Q5SXM2 1469 aa23.89■■□□□ 1.42
PSMB6-204ENST00000575643 PBRM1Q86U86 1689 aa23.87■■□□□ 1.41
PSMB6-204ENST00000575643 ABCA5Q8WWZ7 1642 aa23.82■■□□□ 1.4
PSMB6-204ENST00000575643 BIVM-ERCC5R4GMW8 1640 aa23.8■■□□□ 1.4
PSMB6-204ENST00000575643 GRIN2BQ13224 1484 aa23.79■■□□□ 1.4
PSMB6-204ENST00000575643 MAGI1Q96QZ7 1491 aaPredicted RBP23.79■■□□□ 1.4
PSMB6-204ENST00000575643 SYNJ1O43426 1573 aa23.78■■□□□ 1.4
PSMB6-204ENST00000575643 ABCA10Q8WWZ4 1543 aa23.77■■□□□ 1.4
PSMB6-204ENST00000575643 FBLN2P98095 1184 aa23.76■■□□□ 1.39
PSMB6-204ENST00000575643 TOP2BQ02880 1626 aa23.75■■□□□ 1.39
PSMB6-204ENST00000575643 CLASP1Q7Z460 1538 aa23.74■■□□□ 1.39
PSMB6-204ENST00000575643 GAPVD1Q14C86 1478 aa23.73■■□□□ 1.39
PSMB6-204ENST00000575643 SYNJ2O15056 1496 aa23.69■■□□□ 1.38
PSMB6-204ENST00000575643 ARAP1Q96P48 1450 aa23.69■■□□□ 1.38
PSMB6-204ENST00000575643 WRNQ14191 1432 aaPredicted RBP eCLIP23.68■■□□□ 1.38
PSMB6-204ENST00000575643 ADAMTS12P58397 1594 aa23.62■■□□□ 1.37
PSMB6-204ENST00000575643 CHMP7Q8WUX9 453 aaPredicted RBP23.6■■□□□ 1.37
PSMB6-204ENST00000575643 CYB5RLQ6IPT4 315 aa23.54■■□□□ 1.36
PSMB6-204ENST00000575643 GRIN2AQ12879 1464 aa23.52■■□□□ 1.36
PSMB6-204ENST00000575643 CEP170Q5SW79 1584 aa23.5■■□□□ 1.35
PSMB6-204ENST00000575643 ERICH3Q5RHP9 1530 aa23.47■■□□□ 1.35
PSMB6-204ENST00000575643 NUP160Q12769 1436 aa23.42■■□□□ 1.34
PSMB6-204ENST00000575643 ERCC6L2Q5T890 1561 aa23.42■■□□□ 1.34
PSMB6-204ENST00000575643 FHAD1B1AJZ9 1412 aa23.42■■□□□ 1.34
PSMB6-204ENST00000575643 SHROOM2Q13796 1616 aa23.37■■□□□ 1.33
PSMB6-204ENST00000575643 RUSC2Q8N2Y8 1516 aa23.31■■□□□ 1.32
PSMB6-204ENST00000575643 CUL7Q14999 1698 aa23.22■■□□□ 1.31
PSMB6-204ENST00000575643 TRHP20396 242 aaPredicted RBP23.2■■□□□ 1.3
PSMB6-204ENST00000575643 KIF27Q86VH2 1401 aa23.18■■□□□ 1.3
PSMB6-204ENST00000575643 PRG4Q92954 1404 aaPredicted RBP23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms