RNA–Protein interactions for RNA: ENST00000575617.1

ZNF200-207, Transcript of zinc finger protein 200, humanhuman

TSL 2

Gene ZNF200, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF200-207ENST00000575617 NISCHQ9Y2I1 1504 aa28.11■■■□□ 2.09
ZNF200-207ENST00000575617 CCDC180Q9P1Z9 1646 aa25.01■■□□□ 1.59
ZNF200-207ENST00000575617 ABCC9O60706 1549 aa24.29■■□□□ 1.48
ZNF200-207ENST00000575617 ZCCHC6Q5VYS8 1495 aaKnown RBP23.47■■□□□ 1.35
ZNF200-207ENST00000575617 NACADO15069 1562 aa23.44■■□□□ 1.34
ZNF200-207ENST00000575617 RB1CC1Q8TDY2 1594 aa23.44■■□□□ 1.34
ZNF200-207ENST00000575617 MYO15BQ96JP2 1530 aa23.34■■□□□ 1.33
ZNF200-207ENST00000575617 DCAF1Q9Y4B6 1507 aa23.28■■□□□ 1.32
ZNF200-207ENST00000575617 DCAF8L2P0C7V8 631 aa23.28■■□□□ 1.32
ZNF200-207ENST00000575617 UNC13AQ9UPW8 1703 aa22.99■■□□□ 1.27
ZNF200-207ENST00000575617 SCRIBQ14160 1630 aa22.79■■□□□ 1.24
ZNF200-207ENST00000575617 BICRAQ9NZM4 1560 aa22.76■■□□□ 1.23
ZNF200-207ENST00000575617 PABPN1Q86U42 306 aaKnown RBP eCLIP22.64■■□□□ 1.21
ZNF200-207ENST00000575617 SHROOM4Q9ULL8 1493 aa22.52■■□□□ 1.2
ZNF200-207ENST00000575617 DNAJC5BQ9UF47 199 aa22.15■■□□□ 1.14
ZNF200-207ENST00000575617 EIF4G1Q04637 1599 aaKnown RBP22.13■■□□□ 1.13
ZNF200-207ENST00000575617 CC2D2AQ9P2K1 1620 aa22.02■■□□□ 1.11
ZNF200-207ENST00000575617 CECR2Q9BXF3 1484 aa21.88■■□□□ 1.09
ZNF200-207ENST00000575617 SMARCA4P51532 1647 aa21.82■■□□□ 1.08
ZNF200-207ENST00000575617 BAZ1AQ9NRL2 1556 aaPredicted RBP21.78■■□□□ 1.08
ZNF200-207ENST00000575617 MROH2BQ7Z745 1585 aa21.66■■□□□ 1.06
ZNF200-207ENST00000575617 ATAD2BQ9ULI0 1458 aa21.64■■□□□ 1.05
ZNF200-207ENST00000575617 SMARCA2P51531 1590 aa21.63■■□□□ 1.05
ZNF200-207ENST00000575617 PEG3Q9GZU2 1588 aa21.61■■□□□ 1.05
ZNF200-207ENST00000575617 NCAPD3P42695 1498 aa21.59■■□□□ 1.05
ZNF200-207ENST00000575617 HMGXB3Q12766 1538 aa21.55■■□□□ 1.04
ZNF200-207ENST00000575617 WIZO95785 1651 aa21.46■■□□□ 1.03
ZNF200-207ENST00000575617 BAZ1BQ9UIG0 1483 aaKnown RBP21.45■■□□□ 1.03
ZNF200-207ENST00000575617 RSF1Q96T23 1441 aaPredicted RBP21.42■■□□□ 1.02
ZNF200-207ENST00000575617 TOP2AP11388 1531 aaKnown RBP21.24■□□□□ 0.99
ZNF200-207ENST00000575617 NESP48681 1621 aa21.06■□□□□ 0.96
ZNF200-207ENST00000575617 LAMC3Q9Y6N6 1575 aa21.05■□□□□ 0.96
ZNF200-207ENST00000575617 CADPSQ9ULU8 1353 aa20.95■□□□□ 0.94
ZNF200-207ENST00000575617 CCDC88BA6NC98 1476 aa20.94■□□□□ 0.94
ZNF200-207ENST00000575617 ERCC6Q03468 1493 aa20.91■□□□□ 0.94
ZNF200-207ENST00000575617 KIF21AQ7Z4S6 1674 aa20.88■□□□□ 0.93
ZNF200-207ENST00000575617 CFTRP13569 1480 aa20.88■□□□□ 0.93
ZNF200-207ENST00000575617 SUPT5HO00267 1087 aaKnown RBP20.87■□□□□ 0.93
ZNF200-207ENST00000575617 PDS5BQ9NTI5 1447 aa20.84■□□□□ 0.93
ZNF200-207ENST00000575617 PRDM2Q13029 1718 aa20.84■□□□□ 0.93
ZNF200-207ENST00000575617 DNAJC5Q9H3Z4 198 aa20.83■□□□□ 0.93
ZNF200-207ENST00000575617 THOC2Q8NI27 1593 aaKnown RBP20.79■□□□□ 0.92
ZNF200-207ENST00000575617 FANCD2Q9BXW9 1451 aa20.74■□□□□ 0.91
ZNF200-207ENST00000575617 CEP164Q9UPV0 1460 aa20.71■□□□□ 0.91
ZNF200-207ENST00000575617 CUX2O14529 1486 aa20.69■□□□□ 0.9
ZNF200-207ENST00000575617 MRC2Q9UBG0 1479 aa20.67■□□□□ 0.9
ZNF200-207ENST00000575617 WDR62O43379 1518 aa20.63■□□□□ 0.89
ZNF200-207ENST00000575617 URB2Q14146 1524 aaKnown RBP20.54■□□□□ 0.88
ZNF200-207ENST00000575617 DNMBPQ6XZF7 1577 aa20.44■□□□□ 0.86
ZNF200-207ENST00000575617 TOPBP1Q92547 1522 aa20.43■□□□□ 0.86
ZNF200-207ENST00000575617 ABCC8Q09428 1581 aa20.41■□□□□ 0.86
ZNF200-207ENST00000575617 CUX1P39880 1505 aa20.32■□□□□ 0.84
ZNF200-207ENST00000575617 POLA1P09884 1462 aaPredicted RBP20.27■□□□□ 0.84
ZNF200-207ENST00000575617 IFT140Q96RY7 1462 aa20.27■□□□□ 0.84
ZNF200-207ENST00000575617 FGD5Q6ZNL6 1462 aa20.24■□□□□ 0.83
ZNF200-207ENST00000575617 TARBP1Q13395 1621 aaKnown RBP20.24■□□□□ 0.83
ZNF200-207ENST00000575617 BIVM-ERCC5R4GMW8 1640 aa20.22■□□□□ 0.83
ZNF200-207ENST00000575617 SYNJ1O43426 1573 aa20.2■□□□□ 0.82
ZNF200-207ENST00000575617 WRNQ14191 1432 aaPredicted RBP eCLIP20.19■□□□□ 0.82
ZNF200-207ENST00000575617 TOP2BQ02880 1626 aa20.19■□□□□ 0.82
ZNF200-207ENST00000575617 ZNF608Q9ULD9 1512 aaPredicted RBP20.17■□□□□ 0.82
ZNF200-207ENST00000575617 RAD54L2Q9Y4B4 1467 aa20.16■□□□□ 0.82
ZNF200-207ENST00000575617 EIF4G3O43432 1585 aaKnown RBP20.15■□□□□ 0.82
ZNF200-207ENST00000575617 WDR97A6NE52 1622 aa20.15■□□□□ 0.82
ZNF200-207ENST00000575617 SOGA1O94964 1423 aa20.13■□□□□ 0.81
ZNF200-207ENST00000575617 ABCA10Q8WWZ4 1543 aa20.04■□□□□ 0.8
ZNF200-207ENST00000575617 AQRO60306 1485 aaKnown RBP eCLIP20.04■□□□□ 0.8
ZNF200-207ENST00000575617 ABCA5Q8WWZ7 1642 aa20.01■□□□□ 0.79
ZNF200-207ENST00000575617 TDRD9Q8NDG6 1382 aaKnown RBP20■□□□□ 0.79
ZNF200-207ENST00000575617 PBRM1Q86U86 1689 aa19.97■□□□□ 0.79
ZNF200-207ENST00000575617 GAPVD1Q14C86 1478 aa19.92■□□□□ 0.78
ZNF200-207ENST00000575617 GRIN2BQ13224 1484 aa19.92■□□□□ 0.78
ZNF200-207ENST00000575617 SNAPC4Q5SXM2 1469 aa19.9■□□□□ 0.78
ZNF200-207ENST00000575617 CHD1O14646 1710 aa19.88■□□□□ 0.77
ZNF200-207ENST00000575617 MAGI1Q96QZ7 1491 aaPredicted RBP19.87■□□□□ 0.77
ZNF200-207ENST00000575617 ERICH3Q5RHP9 1530 aa19.81■□□□□ 0.76
ZNF200-207ENST00000575617 ADAMTS12P58397 1594 aa19.8■□□□□ 0.76
ZNF200-207ENST00000575617 SYNJ2O15056 1496 aa19.79■□□□□ 0.76
ZNF200-207ENST00000575617 KIF27Q86VH2 1401 aa19.76■□□□□ 0.75
ZNF200-207ENST00000575617 OSCARQ8IYS5 282 aa19.74■□□□□ 0.75
ZNF200-207ENST00000575617 TRIM41Q8WV44 630 aa19.73■□□□□ 0.75
ZNF200-207ENST00000575617 FHAD1B1AJZ9 1412 aa19.7■□□□□ 0.74
ZNF200-207ENST00000575617 FBLN2P98095 1184 aa19.7■□□□□ 0.74
ZNF200-207ENST00000575617 GRIN2AQ12879 1464 aa19.68■□□□□ 0.74
ZNF200-207ENST00000575617 CHMP7Q8WUX9 453 aaPredicted RBP19.68■□□□□ 0.74
ZNF200-207ENST00000575617 CUL7Q14999 1698 aa19.68■□□□□ 0.74
ZNF200-207ENST00000575617 CLASP1Q7Z460 1538 aa19.66■□□□□ 0.74
ZNF200-207ENST00000575617 IGF1RP08069 1367 aa19.64■□□□□ 0.73
ZNF200-207ENST00000575617 RUSC2Q8N2Y8 1516 aa19.63■□□□□ 0.73
ZNF200-207ENST00000575617 CEP170Q5SW79 1584 aa19.61■□□□□ 0.73
ZNF200-207ENST00000575617 NUP160Q12769 1436 aa19.59■□□□□ 0.73
ZNF200-207ENST00000575617 CHIC1Q5VXU3 224 aa19.55■□□□□ 0.72
ZNF200-207ENST00000575617 RIMBP3CA6NJZ7 1639 aa19.54■□□□□ 0.72
ZNF200-207ENST00000575617 RIMBP3BA6NNM3 1639 aa19.54■□□□□ 0.72
ZNF200-207ENST00000575617 RIMBP3Q9UFD9 1639 aa19.54■□□□□ 0.72
ZNF200-207ENST00000575617 ARHGEF11O15085 1522 aa19.53■□□□□ 0.72
ZNF200-207ENST00000575617 CARMIL1Q5VZK9 1371 aa19.53■□□□□ 0.72
ZNF200-207ENST00000575617 SHROOM2Q13796 1616 aa19.47■□□□□ 0.71
ZNF200-207ENST00000575617 EEA1Q15075 1411 aa19.45■□□□□ 0.7
ZNF200-207ENST00000575617 RAPGEF2Q9Y4G8 1499 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 2196.7 ms