RNA–Protein interactions for RNA: ENST00000575580.1

CAMTA2-215, Transcript of calmodulin binding transcription activator 2, humanhuman

TSL 3

Gene CAMTA2, Length 352 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAMTA2-215ENST00000575580 NISCHQ9Y2I1 1504 aa23.38■■□□□ 1.33
CAMTA2-215ENST00000575580 ABCC9O60706 1549 aa21.6■■□□□ 1.05
CAMTA2-215ENST00000575580 CCDC180Q9P1Z9 1646 aa21.3■■□□□ 1
CAMTA2-215ENST00000575580 DNAJC5BQ9UF47 199 aa20.64■□□□□ 0.89
CAMTA2-215ENST00000575580 RB1CC1Q8TDY2 1594 aa20.45■□□□□ 0.86
CAMTA2-215ENST00000575580 NACADO15069 1562 aa20.2■□□□□ 0.82
CAMTA2-215ENST00000575580 UNC13AQ9UPW8 1703 aa20.06■□□□□ 0.8
CAMTA2-215ENST00000575580 PABPN1Q86U42 306 aaKnown RBP eCLIP19.97■□□□□ 0.79
CAMTA2-215ENST00000575580 BICRAQ9NZM4 1560 aa19.85■□□□□ 0.77
CAMTA2-215ENST00000575580 DCAF8L2P0C7V8 631 aa19.79■□□□□ 0.76
CAMTA2-215ENST00000575580 MYO15BQ96JP2 1530 aa19.79■□□□□ 0.76
CAMTA2-215ENST00000575580 SHROOM4Q9ULL8 1493 aa19.6■□□□□ 0.73
CAMTA2-215ENST00000575580 CC2D2AQ9P2K1 1620 aa19.56■□□□□ 0.72
CAMTA2-215ENST00000575580 CECR2Q9BXF3 1484 aa19.54■□□□□ 0.72
CAMTA2-215ENST00000575580 EIF4G1Q04637 1599 aaKnown RBP19.4■□□□□ 0.7
CAMTA2-215ENST00000575580 DNAJC5Q9H3Z4 198 aa19.37■□□□□ 0.69
CAMTA2-215ENST00000575580 DCAF1Q9Y4B6 1507 aa19.35■□□□□ 0.69
CAMTA2-215ENST00000575580 ZCCHC6Q5VYS8 1495 aaKnown RBP19.28■□□□□ 0.68
CAMTA2-215ENST00000575580 SCRIBQ14160 1630 aa19.26■□□□□ 0.67
CAMTA2-215ENST00000575580 CUX2O14529 1486 aa18.9■□□□□ 0.62
CAMTA2-215ENST00000575580 ERCC6Q03468 1493 aa18.71■□□□□ 0.59
CAMTA2-215ENST00000575580 NCAPD3P42695 1498 aa18.61■□□□□ 0.57
CAMTA2-215ENST00000575580 ATAD2BQ9ULI0 1458 aa18.47■□□□□ 0.55
CAMTA2-215ENST00000575580 HMGXB3Q12766 1538 aa18.47■□□□□ 0.55
CAMTA2-215ENST00000575580 SMARCA2P51531 1590 aa18.44■□□□□ 0.54
CAMTA2-215ENST00000575580 THOC2Q8NI27 1593 aaKnown RBP18.42■□□□□ 0.54
CAMTA2-215ENST00000575580 NESP48681 1621 aa18.42■□□□□ 0.54
CAMTA2-215ENST00000575580 SMARCA4P51532 1647 aa18.37■□□□□ 0.53
CAMTA2-215ENST00000575580 LAMC3Q9Y6N6 1575 aa18.31■□□□□ 0.52
CAMTA2-215ENST00000575580 KIF21AQ7Z4S6 1674 aa18.27■□□□□ 0.52
CAMTA2-215ENST00000575580 BAZ1BQ9UIG0 1483 aaKnown RBP18.26■□□□□ 0.51
CAMTA2-215ENST00000575580 TRIM41Q8WV44 630 aa18.25■□□□□ 0.51
CAMTA2-215ENST00000575580 PEG3Q9GZU2 1588 aa18.22■□□□□ 0.51
CAMTA2-215ENST00000575580 BAZ1AQ9NRL2 1556 aaPredicted RBP18.21■□□□□ 0.51
CAMTA2-215ENST00000575580 PDS5BQ9NTI5 1447 aa18.17■□□□□ 0.5
CAMTA2-215ENST00000575580 MRC2Q9UBG0 1479 aa18.05■□□□□ 0.48
CAMTA2-215ENST00000575580 WDR62O43379 1518 aa18.04■□□□□ 0.48
CAMTA2-215ENST00000575580 CADPSQ9ULU8 1353 aa18■□□□□ 0.47
CAMTA2-215ENST00000575580 MROH2BQ7Z745 1585 aa17.98■□□□□ 0.47
CAMTA2-215ENST00000575580 CEP164Q9UPV0 1460 aa17.88■□□□□ 0.45
CAMTA2-215ENST00000575580 OSCARQ8IYS5 282 aa17.88■□□□□ 0.45
CAMTA2-215ENST00000575580 FANCD2Q9BXW9 1451 aa17.8■□□□□ 0.44
CAMTA2-215ENST00000575580 WIZO95785 1651 aa17.77■□□□□ 0.44
CAMTA2-215ENST00000575580 RIMBP3CA6NJZ7 1639 aa17.77■□□□□ 0.44
CAMTA2-215ENST00000575580 RIMBP3BA6NNM3 1639 aa17.77■□□□□ 0.44
CAMTA2-215ENST00000575580 RIMBP3Q9UFD9 1639 aa17.77■□□□□ 0.44
CAMTA2-215ENST00000575580 CFTRP13569 1480 aa17.7■□□□□ 0.42
CAMTA2-215ENST00000575580 URB2Q14146 1524 aaKnown RBP17.68■□□□□ 0.42
CAMTA2-215ENST00000575580 PRDM2Q13029 1718 aa17.65■□□□□ 0.42
CAMTA2-215ENST00000575580 ARHGEF11O15085 1522 aa17.64■□□□□ 0.41
CAMTA2-215ENST00000575580 IFT140Q96RY7 1462 aa17.55■□□□□ 0.4
CAMTA2-215ENST00000575580 TOP2AP11388 1531 aaKnown RBP17.53■□□□□ 0.4
CAMTA2-215ENST00000575580 ZNF608Q9ULD9 1512 aaPredicted RBP17.52■□□□□ 0.39
CAMTA2-215ENST00000575580 CHD1O14646 1710 aa17.47■□□□□ 0.39
CAMTA2-215ENST00000575580 EIF4G3O43432 1585 aaKnown RBP17.46■□□□□ 0.39
CAMTA2-215ENST00000575580 CYB5RLQ6IPT4 315 aa17.45■□□□□ 0.38
CAMTA2-215ENST00000575580 ARAP1Q96P48 1450 aa17.43■□□□□ 0.38
CAMTA2-215ENST00000575580 TOPBP1Q92547 1522 aa17.42■□□□□ 0.38
CAMTA2-215ENST00000575580 RSF1Q96T23 1441 aaPredicted RBP17.42■□□□□ 0.38
CAMTA2-215ENST00000575580 TRHP20396 242 aaPredicted RBP17.42■□□□□ 0.38
CAMTA2-215ENST00000575580 ABCC8Q09428 1581 aa17.4■□□□□ 0.38
CAMTA2-215ENST00000575580 DNMBPQ6XZF7 1577 aa17.35■□□□□ 0.37
CAMTA2-215ENST00000575580 TARBP1Q13395 1621 aaKnown RBP17.33■□□□□ 0.37
CAMTA2-215ENST00000575580 AEBP2Q6ZN18 517 aaPredicted RBP17.29■□□□□ 0.36
CAMTA2-215ENST00000575580 AQRO60306 1485 aaKnown RBP eCLIP17.29■□□□□ 0.36
CAMTA2-215ENST00000575580 CCDC88BA6NC98 1476 aa17.28■□□□□ 0.36
CAMTA2-215ENST00000575580 FBLN2P98095 1184 aa17.22■□□□□ 0.35
CAMTA2-215ENST00000575580 CLASP1Q7Z460 1538 aa17.21■□□□□ 0.35
CAMTA2-215ENST00000575580 POLA1P09884 1462 aaPredicted RBP17.2■□□□□ 0.34
CAMTA2-215ENST00000575580 WDR97A6NE52 1622 aa17.2■□□□□ 0.34
CAMTA2-215ENST00000575580 SYNJ1O43426 1573 aa17.18■□□□□ 0.34
CAMTA2-215ENST00000575580 SNAPC4Q5SXM2 1469 aa17.12■□□□□ 0.33
CAMTA2-215ENST00000575580 MAGI1Q96QZ7 1491 aaPredicted RBP17.11■□□□□ 0.33
CAMTA2-215ENST00000575580 RAD54L2Q9Y4B4 1467 aa17.11■□□□□ 0.33
CAMTA2-215ENST00000575580 SOGA1O94964 1423 aa17.09■□□□□ 0.33
CAMTA2-215ENST00000575580 TDRD9Q8NDG6 1382 aaKnown RBP17.08■□□□□ 0.32
CAMTA2-215ENST00000575580 CHMP7Q8WUX9 453 aaPredicted RBP17.06■□□□□ 0.32
CAMTA2-215ENST00000575580 SYNJ2O15056 1496 aa17.04■□□□□ 0.32
CAMTA2-215ENST00000575580 GRIN2BQ13224 1484 aa17.03■□□□□ 0.32
CAMTA2-215ENST00000575580 GAPVD1Q14C86 1478 aa17.03■□□□□ 0.32
CAMTA2-215ENST00000575580 FGD5Q6ZNL6 1462 aa17.02■□□□□ 0.32
CAMTA2-215ENST00000575580 PBRM1Q86U86 1689 aa17.01■□□□□ 0.31
CAMTA2-215ENST00000575580 CUX1P39880 1505 aa16.93■□□□□ 0.3
CAMTA2-215ENST00000575580 KIF13AQ9H1H9 1805 aa16.89■□□□□ 0.29
CAMTA2-215ENST00000575580 ABCA5Q8WWZ7 1642 aa16.88■□□□□ 0.29
CAMTA2-215ENST00000575580 ERCC6L2Q5T890 1561 aa16.85■□□□□ 0.29
CAMTA2-215ENST00000575580 ABCA10Q8WWZ4 1543 aa16.83■□□□□ 0.28
CAMTA2-215ENST00000575580 CEP170Q5SW79 1584 aa16.82■□□□□ 0.28
CAMTA2-215ENST00000575580 SHROOM2Q13796 1616 aa16.81■□□□□ 0.28
CAMTA2-215ENST00000575580 GRIN2AQ12879 1464 aa16.81■□□□□ 0.28
CAMTA2-215ENST00000575580 NUP160Q12769 1436 aa16.79■□□□□ 0.28
CAMTA2-215ENST00000575580 ADAMTS12P58397 1594 aa16.77■□□□□ 0.28
CAMTA2-215ENST00000575580 FHAD1B1AJZ9 1412 aa16.67■□□□□ 0.26
CAMTA2-215ENST00000575580 ABCC10Q5T3U5 1492 aa16.66■□□□□ 0.26
CAMTA2-215ENST00000575580 MAPKBP1O60336 1514 aa16.64■□□□□ 0.25
CAMTA2-215ENST00000575580 WRNQ14191 1432 aaPredicted RBP eCLIP16.63■□□□□ 0.25
CAMTA2-215ENST00000575580 ERICH3Q5RHP9 1530 aa16.63■□□□□ 0.25
CAMTA2-215ENST00000575580 DIP2BQ9P265 1576 aa16.63■□□□□ 0.25
CAMTA2-215ENST00000575580 PRG4Q92954 1404 aaPredicted RBP16.62■□□□□ 0.25
CAMTA2-215ENST00000575580 KDM6BO15054 1643 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms