RNA–Protein interactions for RNA: ENST00000575570.1

TBC1D28-208, Transcript of TBC1 domain family member 28, humanhuman

TSL 5

Gene TBC1D28, Length 578 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D28-208ENST00000575570 NISCHQ9Y2I1 1504 aa23.3■■□□□ 1.32
TBC1D28-208ENST00000575570 CCDC180Q9P1Z9 1646 aa20.77■□□□□ 0.92
TBC1D28-208ENST00000575570 ABCC9O60706 1549 aa20.28■□□□□ 0.84
TBC1D28-208ENST00000575570 RB1CC1Q8TDY2 1594 aa19.55■□□□□ 0.72
TBC1D28-208ENST00000575570 NACADO15069 1562 aa19.53■□□□□ 0.72
TBC1D28-208ENST00000575570 MYO15BQ96JP2 1530 aa19.46■□□□□ 0.71
TBC1D28-208ENST00000575570 ZCCHC6Q5VYS8 1495 aaKnown RBP19.4■□□□□ 0.7
TBC1D28-208ENST00000575570 DCAF8L2P0C7V8 631 aa19.39■□□□□ 0.69
TBC1D28-208ENST00000575570 DCAF1Q9Y4B6 1507 aa19.33■□□□□ 0.68
TBC1D28-208ENST00000575570 UNC13AQ9UPW8 1703 aa19.12■□□□□ 0.65
TBC1D28-208ENST00000575570 BICRAQ9NZM4 1560 aa18.96■□□□□ 0.63
TBC1D28-208ENST00000575570 PABPN1Q86U42 306 aaKnown RBP eCLIP18.93■□□□□ 0.62
TBC1D28-208ENST00000575570 SCRIBQ14160 1630 aa18.86■□□□□ 0.61
TBC1D28-208ENST00000575570 SHROOM4Q9ULL8 1493 aa18.82■□□□□ 0.6
TBC1D28-208ENST00000575570 DNAJC5BQ9UF47 199 aa18.68■□□□□ 0.58
TBC1D28-208ENST00000575570 EIF4G1Q04637 1599 aaKnown RBP18.46■□□□□ 0.55
TBC1D28-208ENST00000575570 CC2D2AQ9P2K1 1620 aa18.38■□□□□ 0.53
TBC1D28-208ENST00000575570 CECR2Q9BXF3 1484 aa18.26■□□□□ 0.51
TBC1D28-208ENST00000575570 SMARCA4P51532 1647 aa18.09■□□□□ 0.49
TBC1D28-208ENST00000575570 BAZ1AQ9NRL2 1556 aaPredicted RBP18.07■□□□□ 0.48
TBC1D28-208ENST00000575570 NCAPD3P42695 1498 aa18.02■□□□□ 0.48
TBC1D28-208ENST00000575570 ATAD2BQ9ULI0 1458 aa18■□□□□ 0.47
TBC1D28-208ENST00000575570 SMARCA2P51531 1590 aa18■□□□□ 0.47
TBC1D28-208ENST00000575570 PEG3Q9GZU2 1588 aa17.96■□□□□ 0.46
TBC1D28-208ENST00000575570 HMGXB3Q12766 1538 aa17.93■□□□□ 0.46
TBC1D28-208ENST00000575570 MROH2BQ7Z745 1585 aa17.93■□□□□ 0.46
TBC1D28-208ENST00000575570 BAZ1BQ9UIG0 1483 aaKnown RBP17.83■□□□□ 0.45
TBC1D28-208ENST00000575570 WIZO95785 1651 aa17.73■□□□□ 0.43
TBC1D28-208ENST00000575570 RSF1Q96T23 1441 aaPredicted RBP17.72■□□□□ 0.43
TBC1D28-208ENST00000575570 LAMC3Q9Y6N6 1575 aa17.56■□□□□ 0.4
TBC1D28-208ENST00000575570 TOP2AP11388 1531 aaKnown RBP17.56■□□□□ 0.4
TBC1D28-208ENST00000575570 NESP48681 1621 aa17.54■□□□□ 0.4
TBC1D28-208ENST00000575570 ERCC6Q03468 1493 aa17.5■□□□□ 0.39
TBC1D28-208ENST00000575570 CADPSQ9ULU8 1353 aa17.48■□□□□ 0.39
TBC1D28-208ENST00000575570 PDS5BQ9NTI5 1447 aa17.42■□□□□ 0.38
TBC1D28-208ENST00000575570 CUX2O14529 1486 aa17.39■□□□□ 0.37
TBC1D28-208ENST00000575570 CFTRP13569 1480 aa17.37■□□□□ 0.37
TBC1D28-208ENST00000575570 KIF21AQ7Z4S6 1674 aa17.36■□□□□ 0.37
TBC1D28-208ENST00000575570 CCDC88BA6NC98 1476 aa17.34■□□□□ 0.37
TBC1D28-208ENST00000575570 THOC2Q8NI27 1593 aaKnown RBP17.32■□□□□ 0.36
TBC1D28-208ENST00000575570 PRDM2Q13029 1718 aa17.26■□□□□ 0.35
TBC1D28-208ENST00000575570 FANCD2Q9BXW9 1451 aa17.25■□□□□ 0.35
TBC1D28-208ENST00000575570 CEP164Q9UPV0 1460 aa17.24■□□□□ 0.35
TBC1D28-208ENST00000575570 MRC2Q9UBG0 1479 aa17.24■□□□□ 0.35
TBC1D28-208ENST00000575570 WDR62O43379 1518 aa17.2■□□□□ 0.34
TBC1D28-208ENST00000575570 SUPT5HO00267 1087 aaKnown RBP17.15■□□□□ 0.34
TBC1D28-208ENST00000575570 URB2Q14146 1524 aaKnown RBP17.09■□□□□ 0.33
TBC1D28-208ENST00000575570 ABCC8Q09428 1581 aa17.02■□□□□ 0.32
TBC1D28-208ENST00000575570 TOPBP1Q92547 1522 aa16.98■□□□□ 0.31
TBC1D28-208ENST00000575570 DNMBPQ6XZF7 1577 aa16.97■□□□□ 0.31
TBC1D28-208ENST00000575570 DNAJC5Q9H3Z4 198 aa16.91■□□□□ 0.3
TBC1D28-208ENST00000575570 IFT140Q96RY7 1462 aa16.91■□□□□ 0.3
TBC1D28-208ENST00000575570 POLA1P09884 1462 aaPredicted RBP16.83■□□□□ 0.28
TBC1D28-208ENST00000575570 CUX1P39880 1505 aa16.82■□□□□ 0.28
TBC1D28-208ENST00000575570 TARBP1Q13395 1621 aaKnown RBP16.81■□□□□ 0.28
TBC1D28-208ENST00000575570 ZNF608Q9ULD9 1512 aaPredicted RBP16.79■□□□□ 0.28
TBC1D28-208ENST00000575570 FGD5Q6ZNL6 1462 aa16.77■□□□□ 0.28
TBC1D28-208ENST00000575570 SOGA1O94964 1423 aa16.76■□□□□ 0.27
TBC1D28-208ENST00000575570 EIF4G3O43432 1585 aaKnown RBP16.74■□□□□ 0.27
TBC1D28-208ENST00000575570 WDR97A6NE52 1622 aa16.73■□□□□ 0.27
TBC1D28-208ENST00000575570 RAD54L2Q9Y4B4 1467 aa16.73■□□□□ 0.27
TBC1D28-208ENST00000575570 WRNQ14191 1432 aaPredicted RBP eCLIP16.7■□□□□ 0.26
TBC1D28-208ENST00000575570 BIVM-ERCC5R4GMW8 1640 aa16.7■□□□□ 0.26
TBC1D28-208ENST00000575570 AQRO60306 1485 aaKnown RBP eCLIP16.69■□□□□ 0.26
TBC1D28-208ENST00000575570 TOP2BQ02880 1626 aa16.69■□□□□ 0.26
TBC1D28-208ENST00000575570 SYNJ1O43426 1573 aa16.65■□□□□ 0.26
TBC1D28-208ENST00000575570 ABCA10Q8WWZ4 1543 aa16.65■□□□□ 0.26
TBC1D28-208ENST00000575570 TDRD9Q8NDG6 1382 aaKnown RBP16.64■□□□□ 0.26
TBC1D28-208ENST00000575570 OSCARQ8IYS5 282 aa16.64■□□□□ 0.25
TBC1D28-208ENST00000575570 GRIN2BQ13224 1484 aa16.58■□□□□ 0.24
TBC1D28-208ENST00000575570 ABCA5Q8WWZ7 1642 aa16.57■□□□□ 0.24
TBC1D28-208ENST00000575570 GAPVD1Q14C86 1478 aa16.57■□□□□ 0.24
TBC1D28-208ENST00000575570 MAGI1Q96QZ7 1491 aaPredicted RBP16.56■□□□□ 0.24
TBC1D28-208ENST00000575570 SNAPC4Q5SXM2 1469 aa16.54■□□□□ 0.24
TBC1D28-208ENST00000575570 CHD1O14646 1710 aa16.54■□□□□ 0.24
TBC1D28-208ENST00000575570 PBRM1Q86U86 1689 aa16.54■□□□□ 0.24
TBC1D28-208ENST00000575570 SYNJ2O15056 1496 aa16.48■□□□□ 0.23
TBC1D28-208ENST00000575570 FBLN2P98095 1184 aa16.46■□□□□ 0.23
TBC1D28-208ENST00000575570 CHMP7Q8WUX9 453 aaPredicted RBP16.46■□□□□ 0.23
TBC1D28-208ENST00000575570 ERICH3Q5RHP9 1530 aa16.45■□□□□ 0.22
TBC1D28-208ENST00000575570 ADAMTS12P58397 1594 aa16.4■□□□□ 0.22
TBC1D28-208ENST00000575570 FHAD1B1AJZ9 1412 aa16.39■□□□□ 0.21
TBC1D28-208ENST00000575570 CLASP1Q7Z460 1538 aa16.38■□□□□ 0.21
TBC1D28-208ENST00000575570 RIMBP3CA6NJZ7 1639 aa16.37■□□□□ 0.21
TBC1D28-208ENST00000575570 RIMBP3BA6NNM3 1639 aa16.37■□□□□ 0.21
TBC1D28-208ENST00000575570 RIMBP3Q9UFD9 1639 aa16.37■□□□□ 0.21
TBC1D28-208ENST00000575570 KIF27Q86VH2 1401 aa16.36■□□□□ 0.21
TBC1D28-208ENST00000575570 GRIN2AQ12879 1464 aa16.36■□□□□ 0.21
TBC1D28-208ENST00000575570 ARHGEF11O15085 1522 aa16.36■□□□□ 0.21
TBC1D28-208ENST00000575570 NUP160Q12769 1436 aa16.31■□□□□ 0.2
TBC1D28-208ENST00000575570 IGF1RP08069 1367 aa16.31■□□□□ 0.2
TBC1D28-208ENST00000575570 CUL7Q14999 1698 aa16.28■□□□□ 0.2
TBC1D28-208ENST00000575570 CEP170Q5SW79 1584 aa16.27■□□□□ 0.2
TBC1D28-208ENST00000575570 TRIM41Q8WV44 630 aa16.24■□□□□ 0.19
TBC1D28-208ENST00000575570 ARAP1Q96P48 1450 aa16.22■□□□□ 0.19
TBC1D28-208ENST00000575570 CARMIL1Q5VZK9 1371 aa16.21■□□□□ 0.19
TBC1D28-208ENST00000575570 SHROOM2Q13796 1616 aa16.2■□□□□ 0.18
TBC1D28-208ENST00000575570 CYB5RLQ6IPT4 315 aa16.18■□□□□ 0.18
TBC1D28-208ENST00000575570 RUSC2Q8N2Y8 1516 aa16.16■□□□□ 0.18
TBC1D28-208ENST00000575570 KIAA0586Q9BVV6 1533 aa16.14■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms