RNA–Protein interactions for RNA: ENST00000575455.5

NXN-209, Transcript of nucleoredoxin, humanhuman

TSL 1 (best)

Gene NXN, Length 914 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXN-209ENST00000575455 NISCHQ9Y2I1 1504 aa34.43■■■■□ 3.1
NXN-209ENST00000575455 CCDC180Q9P1Z9 1646 aa30.81■■■□□ 2.52
NXN-209ENST00000575455 ABCC9O60706 1549 aa30.12■■■□□ 2.41
NXN-209ENST00000575455 RB1CC1Q8TDY2 1594 aa29.01■■■□□ 2.23
NXN-209ENST00000575455 NACADO15069 1562 aa28.92■■■□□ 2.22
NXN-209ENST00000575455 MYO15BQ96JP2 1530 aa28.7■■■□□ 2.19
NXN-209ENST00000575455 ZCCHC6Q5VYS8 1495 aaKnown RBP28.67■■■□□ 2.18
NXN-209ENST00000575455 DCAF8L2P0C7V8 631 aa28.67■■■□□ 2.18
NXN-209ENST00000575455 DCAF1Q9Y4B6 1507 aa28.53■■■□□ 2.16
NXN-209ENST00000575455 UNC13AQ9UPW8 1703 aa28.43■■■□□ 2.14
NXN-209ENST00000575455 BICRAQ9NZM4 1560 aa28.11■■■□□ 2.09
NXN-209ENST00000575455 PABPN1Q86U42 306 aaKnown RBP eCLIP28.04■■■□□ 2.08
NXN-209ENST00000575455 SCRIBQ14160 1630 aa28.01■■■□□ 2.07
NXN-209ENST00000575455 SHROOM4Q9ULL8 1493 aa27.86■■■□□ 2.05
NXN-209ENST00000575455 DNAJC5BQ9UF47 199 aa27.67■■■□□ 2.02
NXN-209ENST00000575455 EIF4G1Q04637 1599 aaKnown RBP27.39■■□□□ 1.97
NXN-209ENST00000575455 CC2D2AQ9P2K1 1620 aa27.3■■□□□ 1.96
NXN-209ENST00000575455 CECR2Q9BXF3 1484 aa27.1■■□□□ 1.93
NXN-209ENST00000575455 SMARCA4P51532 1647 aa26.8■■□□□ 1.88
NXN-209ENST00000575455 BAZ1AQ9NRL2 1556 aaPredicted RBP26.73■■□□□ 1.87
NXN-209ENST00000575455 SMARCA2P51531 1590 aa26.65■■□□□ 1.86
NXN-209ENST00000575455 NCAPD3P42695 1498 aa26.63■■□□□ 1.85
NXN-209ENST00000575455 ATAD2BQ9ULI0 1458 aa26.62■■□□□ 1.85
NXN-209ENST00000575455 HMGXB3Q12766 1538 aa26.56■■□□□ 1.84
NXN-209ENST00000575455 PEG3Q9GZU2 1588 aa26.54■■□□□ 1.84
NXN-209ENST00000575455 MROH2BQ7Z745 1585 aa26.51■■□□□ 1.83
NXN-209ENST00000575455 BAZ1BQ9UIG0 1483 aaKnown RBP26.42■■□□□ 1.82
NXN-209ENST00000575455 WIZO95785 1651 aa26.27■■□□□ 1.8
NXN-209ENST00000575455 RSF1Q96T23 1441 aaPredicted RBP26.13■■□□□ 1.77
NXN-209ENST00000575455 LAMC3Q9Y6N6 1575 aa26.03■■□□□ 1.76
NXN-209ENST00000575455 NESP48681 1621 aa26.03■■□□□ 1.76
NXN-209ENST00000575455 ERCC6Q03468 1493 aa26.01■■□□□ 1.75
NXN-209ENST00000575455 TOP2AP11388 1531 aaKnown RBP25.98■■□□□ 1.75
NXN-209ENST00000575455 KIF21AQ7Z4S6 1674 aa25.83■■□□□ 1.73
NXN-209ENST00000575455 CUX2O14529 1486 aa25.82■■□□□ 1.72
NXN-209ENST00000575455 CADPSQ9ULU8 1353 aa25.82■■□□□ 1.72
NXN-209ENST00000575455 PDS5BQ9NTI5 1447 aa25.79■■□□□ 1.72
NXN-209ENST00000575455 THOC2Q8NI27 1593 aaKnown RBP25.77■■□□□ 1.72
NXN-209ENST00000575455 CFTRP13569 1480 aa25.67■■□□□ 1.7
NXN-209ENST00000575455 PRDM2Q13029 1718 aa25.66■■□□□ 1.7
NXN-209ENST00000575455 CCDC88BA6NC98 1476 aa25.6■■□□□ 1.69
NXN-209ENST00000575455 CEP164Q9UPV0 1460 aa25.57■■□□□ 1.68
NXN-209ENST00000575455 FANCD2Q9BXW9 1451 aa25.56■■□□□ 1.68
NXN-209ENST00000575455 MRC2Q9UBG0 1479 aa25.56■■□□□ 1.68
NXN-209ENST00000575455 WDR62O43379 1518 aa25.51■■□□□ 1.67
NXN-209ENST00000575455 URB2Q14146 1524 aaKnown RBP25.32■■□□□ 1.64
NXN-209ENST00000575455 SUPT5HO00267 1087 aaKnown RBP25.26■■□□□ 1.63
NXN-209ENST00000575455 ABCC8Q09428 1581 aa25.15■■□□□ 1.62
NXN-209ENST00000575455 DNMBPQ6XZF7 1577 aa25.15■■□□□ 1.62
NXN-209ENST00000575455 TOPBP1Q92547 1522 aa25.14■■□□□ 1.62
NXN-209ENST00000575455 DNAJC5Q9H3Z4 198 aa25.08■■□□□ 1.61
NXN-209ENST00000575455 IFT140Q96RY7 1462 aa25.02■■□□□ 1.6
NXN-209ENST00000575455 TARBP1Q13395 1621 aaKnown RBP24.93■■□□□ 1.58
NXN-209ENST00000575455 POLA1P09884 1462 aaPredicted RBP24.92■■□□□ 1.58
NXN-209ENST00000575455 CUX1P39880 1505 aa24.91■■□□□ 1.58
NXN-209ENST00000575455 ZNF608Q9ULD9 1512 aaPredicted RBP24.89■■□□□ 1.57
NXN-209ENST00000575455 EIF4G3O43432 1585 aaKnown RBP24.88■■□□□ 1.57
NXN-209ENST00000575455 FGD5Q6ZNL6 1462 aa24.83■■□□□ 1.57
NXN-209ENST00000575455 WDR97A6NE52 1622 aa24.78■■□□□ 1.56
NXN-209ENST00000575455 SOGA1O94964 1423 aa24.77■■□□□ 1.56
NXN-209ENST00000575455 RAD54L2Q9Y4B4 1467 aa24.77■■□□□ 1.56
NXN-209ENST00000575455 BIVM-ERCC5R4GMW8 1640 aa24.72■■□□□ 1.55
NXN-209ENST00000575455 AQRO60306 1485 aaKnown RBP eCLIP24.7■■□□□ 1.55
NXN-209ENST00000575455 TOP2BQ02880 1626 aa24.69■■□□□ 1.54
NXN-209ENST00000575455 WRNQ14191 1432 aaPredicted RBP eCLIP24.66■■□□□ 1.54
NXN-209ENST00000575455 SYNJ1O43426 1573 aa24.66■■□□□ 1.54
NXN-209ENST00000575455 CHD1O14646 1710 aa24.63■■□□□ 1.53
NXN-209ENST00000575455 TDRD9Q8NDG6 1382 aaKnown RBP24.62■■□□□ 1.53
NXN-209ENST00000575455 OSCARQ8IYS5 282 aa24.61■■□□□ 1.53
NXN-209ENST00000575455 ABCA10Q8WWZ4 1543 aa24.6■■□□□ 1.53
NXN-209ENST00000575455 PBRM1Q86U86 1689 aa24.59■■□□□ 1.53
NXN-209ENST00000575455 ABCA5Q8WWZ7 1642 aa24.57■■□□□ 1.52
NXN-209ENST00000575455 GRIN2BQ13224 1484 aa24.54■■□□□ 1.52
NXN-209ENST00000575455 SNAPC4Q5SXM2 1469 aa24.53■■□□□ 1.52
NXN-209ENST00000575455 GAPVD1Q14C86 1478 aa24.51■■□□□ 1.51
NXN-209ENST00000575455 MAGI1Q96QZ7 1491 aaPredicted RBP24.51■■□□□ 1.51
NXN-209ENST00000575455 SYNJ2O15056 1496 aa24.41■■□□□ 1.5
NXN-209ENST00000575455 FBLN2P98095 1184 aa24.4■■□□□ 1.5
NXN-209ENST00000575455 RIMBP3CA6NJZ7 1639 aa24.36■■□□□ 1.49
NXN-209ENST00000575455 RIMBP3BA6NNM3 1639 aa24.36■■□□□ 1.49
NXN-209ENST00000575455 RIMBP3Q9UFD9 1639 aa24.36■■□□□ 1.49
NXN-209ENST00000575455 ADAMTS12P58397 1594 aa24.34■■□□□ 1.49
NXN-209ENST00000575455 ERICH3Q5RHP9 1530 aa24.33■■□□□ 1.49
NXN-209ENST00000575455 CHMP7Q8WUX9 453 aaPredicted RBP24.32■■□□□ 1.48
NXN-209ENST00000575455 ARHGEF11O15085 1522 aa24.31■■□□□ 1.48
NXN-209ENST00000575455 CLASP1Q7Z460 1538 aa24.3■■□□□ 1.48
NXN-209ENST00000575455 GRIN2AQ12879 1464 aa24.24■■□□□ 1.47
NXN-209ENST00000575455 FHAD1B1AJZ9 1412 aa24.22■■□□□ 1.47
NXN-209ENST00000575455 TRIM41Q8WV44 630 aa24.18■■□□□ 1.46
NXN-209ENST00000575455 KIF27Q86VH2 1401 aa24.16■■□□□ 1.46
NXN-209ENST00000575455 CEP170Q5SW79 1584 aa24.15■■□□□ 1.46
NXN-209ENST00000575455 CUL7Q14999 1698 aa24.13■■□□□ 1.45
NXN-209ENST00000575455 NUP160Q12769 1436 aa24.12■■□□□ 1.45
NXN-209ENST00000575455 ARAP1Q96P48 1450 aa24.09■■□□□ 1.45
NXN-209ENST00000575455 SHROOM2Q13796 1616 aa24.03■■□□□ 1.44
NXN-209ENST00000575455 IGF1RP08069 1367 aa24.02■■□□□ 1.44
NXN-209ENST00000575455 RUSC2Q8N2Y8 1516 aa24■■□□□ 1.43
NXN-209ENST00000575455 CYB5RLQ6IPT4 315 aa23.97■■□□□ 1.43
NXN-209ENST00000575455 ERCC6L2Q5T890 1561 aa23.91■■□□□ 1.42
NXN-209ENST00000575455 CARMIL1Q5VZK9 1371 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms