RNA–Protein interactions for RNA: ENST00000575287.1

CIC-206, Transcript of capicua transcriptional repressor, humanhuman

TSL 3

Gene CIC, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIC-206ENST00000575287 NISCHQ9Y2I1 1504 aa38.94■■■■□ 3.82
CIC-206ENST00000575287 CCDC180Q9P1Z9 1646 aa34.04■■■■□ 3.04
CIC-206ENST00000575287 ZCCHC6Q5VYS8 1495 aaKnown RBP32.67■■■□□ 2.82
CIC-206ENST00000575287 ABCC9O60706 1549 aa32.31■■■□□ 2.76
CIC-206ENST00000575287 DCAF1Q9Y4B6 1507 aa32.26■■■□□ 2.75
CIC-206ENST00000575287 DCAF8L2P0C7V8 631 aa32.22■■■□□ 2.75
CIC-206ENST00000575287 MYO15BQ96JP2 1530 aa31.95■■■□□ 2.71
CIC-206ENST00000575287 NACADO15069 1562 aa31.79■■■□□ 2.68
CIC-206ENST00000575287 SHROOM4Q9ULL8 1493 aa31.59■■■□□ 2.65
CIC-206ENST00000575287 RB1CC1Q8TDY2 1594 aa31.54■■■□□ 2.64
CIC-206ENST00000575287 SCRIBQ14160 1630 aa31.22■■■□□ 2.59
CIC-206ENST00000575287 UNC13AQ9UPW8 1703 aa30.73■■■□□ 2.51
CIC-206ENST00000575287 BICRAQ9NZM4 1560 aa30.51■■■□□ 2.47
CIC-206ENST00000575287 PABPN1Q86U42 306 aaKnown RBP eCLIP30.44■■■□□ 2.46
CIC-206ENST00000575287 SUPT5HO00267 1087 aaKnown RBP30.36■■■□□ 2.45
CIC-206ENST00000575287 CECR2Q9BXF3 1484 aa30.23■■■□□ 2.43
CIC-206ENST00000575287 RSF1Q96T23 1441 aaPredicted RBP30.14■■■□□ 2.42
CIC-206ENST00000575287 BAZ1AQ9NRL2 1556 aaPredicted RBP30.11■■■□□ 2.41
CIC-206ENST00000575287 MROH2BQ7Z745 1585 aa30.04■■■□□ 2.4
CIC-206ENST00000575287 SMARCA4P51532 1647 aa29.95■■■□□ 2.38
CIC-206ENST00000575287 WIZO95785 1651 aa29.76■■■□□ 2.35
CIC-206ENST00000575287 EIF4G1Q04637 1599 aaKnown RBP29.64■■■□□ 2.33
CIC-206ENST00000575287 PEG3Q9GZU2 1588 aa29.62■■■□□ 2.33
CIC-206ENST00000575287 SMARCA2P51531 1590 aa29.54■■■□□ 2.32
CIC-206ENST00000575287 ATAD2BQ9ULI0 1458 aa29.53■■■□□ 2.32
CIC-206ENST00000575287 TOP2AP11388 1531 aaKnown RBP29.52■■■□□ 2.32
CIC-206ENST00000575287 BAZ1BQ9UIG0 1483 aaKnown RBP29.36■■■□□ 2.29
CIC-206ENST00000575287 NCAPD3P42695 1498 aa29.34■■■□□ 2.29
CIC-206ENST00000575287 HMGXB3Q12766 1538 aa29.26■■■□□ 2.27
CIC-206ENST00000575287 CC2D2AQ9P2K1 1620 aa29.23■■■□□ 2.27
CIC-206ENST00000575287 CCDC88BA6NC98 1476 aa29.21■■■□□ 2.27
CIC-206ENST00000575287 DNAJC5BQ9UF47 199 aa29.18■■■□□ 2.26
CIC-206ENST00000575287 CHIC1Q5VXU3 224 aa28.99■■■□□ 2.23
CIC-206ENST00000575287 CFTRP13569 1480 aa28.62■■■□□ 2.17
CIC-206ENST00000575287 TRIM41Q8WV44 630 aa28.62■■■□□ 2.17
CIC-206ENST00000575287 CADPSQ9ULU8 1353 aa28.58■■■□□ 2.17
CIC-206ENST00000575287 ABCC8Q09428 1581 aa28.46■■■□□ 2.15
CIC-206ENST00000575287 WRNQ14191 1432 aaPredicted RBP eCLIP28.4■■■□□ 2.14
CIC-206ENST00000575287 PRDM2Q13029 1718 aa28.38■■■□□ 2.13
CIC-206ENST00000575287 LAMC3Q9Y6N6 1575 aa28.35■■■□□ 2.13
CIC-206ENST00000575287 NESP48681 1621 aa28.28■■■□□ 2.12
CIC-206ENST00000575287 FANCD2Q9BXW9 1451 aa28.23■■■□□ 2.11
CIC-206ENST00000575287 SYNJ1O43426 1573 aa28.22■■■□□ 2.11
CIC-206ENST00000575287 PDS5BQ9NTI5 1447 aa28.18■■■□□ 2.1
CIC-206ENST00000575287 TOP2BQ02880 1626 aa28.16■■■□□ 2.1
CIC-206ENST00000575287 BIVM-ERCC5R4GMW8 1640 aa28.13■■■□□ 2.09
CIC-206ENST00000575287 CUX1P39880 1505 aa28.12■■■□□ 2.09
CIC-206ENST00000575287 CEP164Q9UPV0 1460 aa28.08■■■□□ 2.09
CIC-206ENST00000575287 FAM9AQ8IZU1 332 aaPredicted RBP28.01■■■□□ 2.07
CIC-206ENST00000575287 EEA1Q15075 1411 aa27.97■■■□□ 2.07
CIC-206ENST00000575287 DNMBPQ6XZF7 1577 aa27.94■■■□□ 2.06
CIC-206ENST00000575287 SOGA1O94964 1423 aa27.94■■■□□ 2.06
CIC-206ENST00000575287 KIF21AQ7Z4S6 1674 aa27.91■■■□□ 2.06
CIC-206ENST00000575287 TOPBP1Q92547 1522 aa27.9■■■□□ 2.06
CIC-206ENST00000575287 URB2Q14146 1524 aaKnown RBP27.86■■■□□ 2.05
CIC-206ENST00000575287 FGD5Q6ZNL6 1462 aa27.85■■■□□ 2.05
CIC-206ENST00000575287 LOC105371045A0A1W2PR82 267 aa27.83■■■□□ 2.05
CIC-206ENST00000575287 RUSC2Q8N2Y8 1516 aa27.82■■■□□ 2.04
CIC-206ENST00000575287 CSRNP3Q8WYN3 585 aa27.81■■■□□ 2.04
CIC-206ENST00000575287 MRC2Q9UBG0 1479 aa27.79■■■□□ 2.04
CIC-206ENST00000575287 ERCC6Q03468 1493 aa27.77■■■□□ 2.04
CIC-206ENST00000575287 POLA1P09884 1462 aaPredicted RBP27.74■■■□□ 2.03
CIC-206ENST00000575287 KIF27Q86VH2 1401 aa27.73■■■□□ 2.03
CIC-206ENST00000575287 CUX2O14529 1486 aa27.65■■■□□ 2.02
CIC-206ENST00000575287 RAD54L2Q9Y4B4 1467 aa27.63■■■□□ 2.01
CIC-206ENST00000575287 WDR62O43379 1518 aa27.62■■■□□ 2.01
CIC-206ENST00000575287 ABCA10Q8WWZ4 1543 aa27.62■■■□□ 2.01
CIC-206ENST00000575287 EHMT2Q96KQ7 1210 aa27.57■■■□□ 2
CIC-206ENST00000575287 KIF21BO75037 1637 aa27.54■■■□□ 2
CIC-206ENST00000575287 THOC2Q8NI27 1593 aaKnown RBP27.53■■■□□ 2
CIC-206ENST00000575287 GOLGA3Q08378 1498 aa27.53■■■□□ 2
CIC-206ENST00000575287 WDR97A6NE52 1622 aa27.48■■□□□ 1.99
CIC-206ENST00000575287 IGF1RP08069 1367 aa27.48■■□□□ 1.99
CIC-206ENST00000575287 PRXQ9BXM0 1461 aa27.46■■□□□ 1.99
CIC-206ENST00000575287 TARBP1Q13395 1621 aaKnown RBP27.46■■□□□ 1.99
CIC-206ENST00000575287 IFT140Q96RY7 1462 aa27.44■■□□□ 1.98
CIC-206ENST00000575287 TNIKQ9UKE5 1360 aa27.43■■□□□ 1.98
CIC-206ENST00000575287 UBTFP17480 764 aaKnown RBP27.42■■□□□ 1.98
CIC-206ENST00000575287 ERICH3Q5RHP9 1530 aa27.41■■□□□ 1.98
CIC-206ENST00000575287 TDRD9Q8NDG6 1382 aaKnown RBP27.4■■□□□ 1.98
CIC-206ENST00000575287 RAPGEF2Q9Y4G8 1499 aa27.38■■□□□ 1.97
CIC-206ENST00000575287 GAPVD1Q14C86 1478 aa27.38■■□□□ 1.97
CIC-206ENST00000575287 ABCA5Q8WWZ7 1642 aa27.38■■□□□ 1.97
CIC-206ENST00000575287 CARMIL1Q5VZK9 1371 aa27.35■■□□□ 1.97
CIC-206ENST00000575287 CUL7Q14999 1698 aa27.27■■□□□ 1.96
CIC-206ENST00000575287 AQRO60306 1485 aaKnown RBP eCLIP27.24■■□□□ 1.95
CIC-206ENST00000575287 CEP162Q5TB80 1403 aa27.22■■□□□ 1.95
CIC-206ENST00000575287 ZNF608Q9ULD9 1512 aaPredicted RBP27.21■■□□□ 1.95
CIC-206ENST00000575287 GRIN2BQ13224 1484 aa27.2■■□□□ 1.95
CIC-206ENST00000575287 PBRM1Q86U86 1689 aa27.15■■□□□ 1.94
CIC-206ENST00000575287 EIF4G3O43432 1585 aaKnown RBP27.12■■□□□ 1.93
CIC-206ENST00000575287 FHAD1B1AJZ9 1412 aa27.1■■□□□ 1.93
CIC-206ENST00000575287 CLIP1P30622 1438 aa27.07■■□□□ 1.92
CIC-206ENST00000575287 ADAMTS12P58397 1594 aa27.04■■□□□ 1.92
CIC-206ENST00000575287 SNAPC4Q5SXM2 1469 aa27■■□□□ 1.91
CIC-206ENST00000575287 MAGI1Q96QZ7 1491 aaPredicted RBP27■■□□□ 1.91
CIC-206ENST00000575287 RANGAP1P46060 587 aaPredicted RBP26.95■■□□□ 1.9
CIC-206ENST00000575287 SYNJ2O15056 1496 aa26.88■■□□□ 1.89
CIC-206ENST00000575287 CTTNBP2Q8WZ74 1663 aa26.88■■□□□ 1.89
CIC-206ENST00000575287 CHMP7Q8WUX9 453 aaPredicted RBP26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms