RNA–Protein interactions for RNA: ENST00000575148.5

APOC1P1-204, Transcript of apolipoprotein C1 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene APOC1P1, Length 560 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P1-204ENST00000575148 NISCHQ9Y2I1 1504 aa28.4■■■□□ 2.14
APOC1P1-204ENST00000575148 CCDC180Q9P1Z9 1646 aa25.33■■□□□ 1.65
APOC1P1-204ENST00000575148 ABCC9O60706 1549 aa25.12■■□□□ 1.61
APOC1P1-204ENST00000575148 RB1CC1Q8TDY2 1594 aa23.97■■□□□ 1.43
APOC1P1-204ENST00000575148 DCAF8L2P0C7V8 631 aa23.88■■□□□ 1.41
APOC1P1-204ENST00000575148 NACADO15069 1562 aa23.86■■□□□ 1.41
APOC1P1-204ENST00000575148 ZCCHC6Q5VYS8 1495 aaKnown RBP23.62■■□□□ 1.37
APOC1P1-204ENST00000575148 MYO15BQ96JP2 1530 aa23.59■■□□□ 1.37
APOC1P1-204ENST00000575148 UNC13AQ9UPW8 1703 aa23.5■■□□□ 1.35
APOC1P1-204ENST00000575148 PABPN1Q86U42 306 aaKnown RBP eCLIP23.44■■□□□ 1.34
APOC1P1-204ENST00000575148 DCAF1Q9Y4B6 1507 aa23.43■■□□□ 1.34
APOC1P1-204ENST00000575148 DNAJC5BQ9UF47 199 aa23.31■■□□□ 1.32
APOC1P1-204ENST00000575148 BICRAQ9NZM4 1560 aa23.31■■□□□ 1.32
APOC1P1-204ENST00000575148 SCRIBQ14160 1630 aa23.19■■□□□ 1.3
APOC1P1-204ENST00000575148 SHROOM4Q9ULL8 1493 aa22.92■■□□□ 1.26
APOC1P1-204ENST00000575148 EIF4G1Q04637 1599 aaKnown RBP22.69■■□□□ 1.22
APOC1P1-204ENST00000575148 CC2D2AQ9P2K1 1620 aa22.68■■□□□ 1.22
APOC1P1-204ENST00000575148 CECR2Q9BXF3 1484 aa22.56■■□□□ 1.2
APOC1P1-204ENST00000575148 SMARCA4P51532 1647 aa22.11■■□□□ 1.13
APOC1P1-204ENST00000575148 ATAD2BQ9ULI0 1458 aa22.04■■□□□ 1.12
APOC1P1-204ENST00000575148 NCAPD3P42695 1498 aa22.03■■□□□ 1.12
APOC1P1-204ENST00000575148 BAZ1AQ9NRL2 1556 aaPredicted RBP22■■□□□ 1.11
APOC1P1-204ENST00000575148 SMARCA2P51531 1590 aa21.97■■□□□ 1.11
APOC1P1-204ENST00000575148 MROH2BQ7Z745 1585 aa21.92■■□□□ 1.1
APOC1P1-204ENST00000575148 HMGXB3Q12766 1538 aa21.9■■□□□ 1.1
APOC1P1-204ENST00000575148 PEG3Q9GZU2 1588 aa21.85■■□□□ 1.09
APOC1P1-204ENST00000575148 BAZ1BQ9UIG0 1483 aaKnown RBP21.84■■□□□ 1.09
APOC1P1-204ENST00000575148 WIZO95785 1651 aa21.69■■□□□ 1.06
APOC1P1-204ENST00000575148 NESP48681 1621 aa21.68■■□□□ 1.06
APOC1P1-204ENST00000575148 ERCC6Q03468 1493 aa21.63■■□□□ 1.05
APOC1P1-204ENST00000575148 RSF1Q96T23 1441 aaPredicted RBP21.55■■□□□ 1.04
APOC1P1-204ENST00000575148 LAMC3Q9Y6N6 1575 aa21.49■■□□□ 1.03
APOC1P1-204ENST00000575148 CUX2O14529 1486 aa21.45■■□□□ 1.02
APOC1P1-204ENST00000575148 KIF21AQ7Z4S6 1674 aa21.4■■□□□ 1.02
APOC1P1-204ENST00000575148 TOP2AP11388 1531 aaKnown RBP21.39■■□□□ 1.02
APOC1P1-204ENST00000575148 CADPSQ9ULU8 1353 aa21.38■■□□□ 1.01
APOC1P1-204ENST00000575148 THOC2Q8NI27 1593 aaKnown RBP21.37■■□□□ 1.01
APOC1P1-204ENST00000575148 PDS5BQ9NTI5 1447 aa21.35■■□□□ 1.01
APOC1P1-204ENST00000575148 CFTRP13569 1480 aa21.21■□□□□ 0.99
APOC1P1-204ENST00000575148 MRC2Q9UBG0 1479 aa21.18■□□□□ 0.98
APOC1P1-204ENST00000575148 CCDC88BA6NC98 1476 aa21.17■□□□□ 0.98
APOC1P1-204ENST00000575148 FANCD2Q9BXW9 1451 aa21.17■□□□□ 0.98
APOC1P1-204ENST00000575148 CEP164Q9UPV0 1460 aa21.16■□□□□ 0.98
APOC1P1-204ENST00000575148 WDR62O43379 1518 aa21.12■□□□□ 0.97
APOC1P1-204ENST00000575148 DNAJC5Q9H3Z4 198 aa21.11■□□□□ 0.97
APOC1P1-204ENST00000575148 PRDM2Q13029 1718 aa21.05■□□□□ 0.96
APOC1P1-204ENST00000575148 URB2Q14146 1524 aaKnown RBP21■□□□□ 0.95
APOC1P1-204ENST00000575148 SUPT5HO00267 1087 aaKnown RBP20.87■□□□□ 0.93
APOC1P1-204ENST00000575148 TOPBP1Q92547 1522 aa20.81■□□□□ 0.92
APOC1P1-204ENST00000575148 DNMBPQ6XZF7 1577 aa20.75■□□□□ 0.91
APOC1P1-204ENST00000575148 ZNF608Q9ULD9 1512 aaPredicted RBP20.71■□□□□ 0.91
APOC1P1-204ENST00000575148 ABCC8Q09428 1581 aa20.71■□□□□ 0.91
APOC1P1-204ENST00000575148 IFT140Q96RY7 1462 aa20.7■□□□□ 0.9
APOC1P1-204ENST00000575148 POLA1P09884 1462 aaPredicted RBP20.62■□□□□ 0.89
APOC1P1-204ENST00000575148 TARBP1Q13395 1621 aaKnown RBP20.6■□□□□ 0.89
APOC1P1-204ENST00000575148 EIF4G3O43432 1585 aaKnown RBP20.59■□□□□ 0.89
APOC1P1-204ENST00000575148 CUX1P39880 1505 aa20.58■□□□□ 0.89
APOC1P1-204ENST00000575148 RAD54L2Q9Y4B4 1467 aa20.56■□□□□ 0.88
APOC1P1-204ENST00000575148 AQRO60306 1485 aaKnown RBP eCLIP20.54■□□□□ 0.88
APOC1P1-204ENST00000575148 FGD5Q6ZNL6 1462 aa20.54■□□□□ 0.88
APOC1P1-204ENST00000575148 OSCARQ8IYS5 282 aa20.52■□□□□ 0.88
APOC1P1-204ENST00000575148 SOGA1O94964 1423 aa20.52■□□□□ 0.87
APOC1P1-204ENST00000575148 TDRD9Q8NDG6 1382 aaKnown RBP20.46■□□□□ 0.87
APOC1P1-204ENST00000575148 CHD1O14646 1710 aa20.4■□□□□ 0.86
APOC1P1-204ENST00000575148 TRIM41Q8WV44 630 aa20.38■□□□□ 0.85
APOC1P1-204ENST00000575148 WDR97A6NE52 1622 aa20.38■□□□□ 0.85
APOC1P1-204ENST00000575148 SNAPC4Q5SXM2 1469 aa20.35■□□□□ 0.85
APOC1P1-204ENST00000575148 FBLN2P98095 1184 aa20.34■□□□□ 0.85
APOC1P1-204ENST00000575148 SYNJ1O43426 1573 aa20.33■□□□□ 0.84
APOC1P1-204ENST00000575148 WRNQ14191 1432 aaPredicted RBP eCLIP20.32■□□□□ 0.84
APOC1P1-204ENST00000575148 BIVM-ERCC5R4GMW8 1640 aa20.31■□□□□ 0.84
APOC1P1-204ENST00000575148 ABCA10Q8WWZ4 1543 aa20.3■□□□□ 0.84
APOC1P1-204ENST00000575148 TOP2BQ02880 1626 aa20.3■□□□□ 0.84
APOC1P1-204ENST00000575148 GRIN2BQ13224 1484 aa20.29■□□□□ 0.84
APOC1P1-204ENST00000575148 RIMBP3CA6NJZ7 1639 aa20.28■□□□□ 0.84
APOC1P1-204ENST00000575148 RIMBP3BA6NNM3 1639 aa20.28■□□□□ 0.84
APOC1P1-204ENST00000575148 RIMBP3Q9UFD9 1639 aa20.28■□□□□ 0.84
APOC1P1-204ENST00000575148 GAPVD1Q14C86 1478 aa20.28■□□□□ 0.84
APOC1P1-204ENST00000575148 PBRM1Q86U86 1689 aa20.28■□□□□ 0.84
APOC1P1-204ENST00000575148 ABCA5Q8WWZ7 1642 aa20.26■□□□□ 0.83
APOC1P1-204ENST00000575148 MAGI1Q96QZ7 1491 aaPredicted RBP20.25■□□□□ 0.83
APOC1P1-204ENST00000575148 ARHGEF11O15085 1522 aa20.23■□□□□ 0.83
APOC1P1-204ENST00000575148 CHMP7Q8WUX9 453 aaPredicted RBP20.21■□□□□ 0.83
APOC1P1-204ENST00000575148 SYNJ2O15056 1496 aa20.19■□□□□ 0.82
APOC1P1-204ENST00000575148 CLASP1Q7Z460 1538 aa20.14■□□□□ 0.81
APOC1P1-204ENST00000575148 ADAMTS12P58397 1594 aa20.09■□□□□ 0.81
APOC1P1-204ENST00000575148 ARAP1Q96P48 1450 aa20.08■□□□□ 0.81
APOC1P1-204ENST00000575148 CYB5RLQ6IPT4 315 aa20.07■□□□□ 0.8
APOC1P1-204ENST00000575148 GRIN2AQ12879 1464 aa20.05■□□□□ 0.8
APOC1P1-204ENST00000575148 ERICH3Q5RHP9 1530 aa20.03■□□□□ 0.8
APOC1P1-204ENST00000575148 FHAD1B1AJZ9 1412 aa20.02■□□□□ 0.79
APOC1P1-204ENST00000575148 CEP170Q5SW79 1584 aa19.99■□□□□ 0.79
APOC1P1-204ENST00000575148 NUP160Q12769 1436 aa19.96■□□□□ 0.79
APOC1P1-204ENST00000575148 ERCC6L2Q5T890 1561 aa19.91■□□□□ 0.78
APOC1P1-204ENST00000575148 KIF27Q86VH2 1401 aa19.89■□□□□ 0.77
APOC1P1-204ENST00000575148 IGF1RP08069 1367 aa19.87■□□□□ 0.77
APOC1P1-204ENST00000575148 SHROOM2Q13796 1616 aa19.84■□□□□ 0.77
APOC1P1-204ENST00000575148 CUL7Q14999 1698 aa19.81■□□□□ 0.76
APOC1P1-204ENST00000575148 RUSC2Q8N2Y8 1516 aa19.8■□□□□ 0.76
APOC1P1-204ENST00000575148 PRG4Q92954 1404 aaPredicted RBP19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms