RNA–Protein interactions for RNA: ENST00000575113.1

RFWD3-208, Transcript of ring finger and WD repeat domain 3, humanhuman

TSL 3

Gene RFWD3, Length 706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3-208ENST00000575113 NISCHQ9Y2I1 1504 aa53.66■■■■■ 6.18
RFWD3-208ENST00000575113 CCDC180Q9P1Z9 1646 aa48.04■■■■■ 5.28
RFWD3-208ENST00000575113 ABCC9O60706 1549 aa48.04■■■■■ 5.28
RFWD3-208ENST00000575113 RB1CC1Q8TDY2 1594 aa45.75■■■■■ 4.91
RFWD3-208ENST00000575113 NACADO15069 1562 aa45.45■■■■■ 4.87
RFWD3-208ENST00000575113 DCAF8L2P0C7V8 631 aa45.43■■■■■ 4.86
RFWD3-208ENST00000575113 DNAJC5BQ9UF47 199 aa44.91■■■■■ 4.78
RFWD3-208ENST00000575113 MYO15BQ96JP2 1530 aa44.84■■■■■ 4.77
RFWD3-208ENST00000575113 PABPN1Q86U42 306 aaKnown RBP eCLIP44.78■■■■■ 4.76
RFWD3-208ENST00000575113 UNC13AQ9UPW8 1703 aa44.55■■■■■ 4.72
RFWD3-208ENST00000575113 ZCCHC6Q5VYS8 1495 aaKnown RBP44.48■■■■■ 4.71
RFWD3-208ENST00000575113 BICRAQ9NZM4 1560 aa44.32■■■■■ 4.69
RFWD3-208ENST00000575113 DCAF1Q9Y4B6 1507 aa44.3■■■■■ 4.68
RFWD3-208ENST00000575113 SCRIBQ14160 1630 aa43.85■■■■■ 4.61
RFWD3-208ENST00000575113 SHROOM4Q9ULL8 1493 aa43.81■■■■■ 4.6
RFWD3-208ENST00000575113 CC2D2AQ9P2K1 1620 aa43.34■■■■■ 4.53
RFWD3-208ENST00000575113 EIF4G1Q04637 1599 aaKnown RBP43.29■■■■■ 4.52
RFWD3-208ENST00000575113 CECR2Q9BXF3 1484 aa43.25■■■■■ 4.51
RFWD3-208ENST00000575113 NCAPD3P42695 1498 aa41.97■■■■■ 4.31
RFWD3-208ENST00000575113 ATAD2BQ9ULI0 1458 aa41.86■■■■■ 4.29
RFWD3-208ENST00000575113 SMARCA4P51532 1647 aa41.81■■■■■ 4.28
RFWD3-208ENST00000575113 SMARCA2P51531 1590 aa41.76■■■■■ 4.27
RFWD3-208ENST00000575113 BAZ1AQ9NRL2 1556 aaPredicted RBP41.67■■■■■ 4.26
RFWD3-208ENST00000575113 HMGXB3Q12766 1538 aa41.64■■■■■ 4.26
RFWD3-208ENST00000575113 ERCC6Q03468 1493 aa41.52■■■■■ 4.24
RFWD3-208ENST00000575113 BAZ1BQ9UIG0 1483 aaKnown RBP41.5■■■■■ 4.23
RFWD3-208ENST00000575113 PEG3Q9GZU2 1588 aa41.37■■■■■ 4.21
RFWD3-208ENST00000575113 MROH2BQ7Z745 1585 aa41.34■■■■■ 4.21
RFWD3-208ENST00000575113 CUX2O14529 1486 aa41.34■■■■■ 4.21
RFWD3-208ENST00000575113 NESP48681 1621 aa41.26■■■■■ 4.19
RFWD3-208ENST00000575113 DNAJC5Q9H3Z4 198 aa41.2■■■■■ 4.19
RFWD3-208ENST00000575113 LAMC3Q9Y6N6 1575 aa40.99■■■■■ 4.15
RFWD3-208ENST00000575113 PDS5BQ9NTI5 1447 aa40.83■■■■■ 4.13
RFWD3-208ENST00000575113 WIZO95785 1651 aa40.82■■■■■ 4.13
RFWD3-208ENST00000575113 THOC2Q8NI27 1593 aaKnown RBP40.77■■■■■ 4.12
RFWD3-208ENST00000575113 CADPSQ9ULU8 1353 aa40.74■■■■■ 4.11
RFWD3-208ENST00000575113 KIF21AQ7Z4S6 1674 aa40.66■■■■■ 4.1
RFWD3-208ENST00000575113 RSF1Q96T23 1441 aaPredicted RBP40.56■■■■■ 4.08
RFWD3-208ENST00000575113 MRC2Q9UBG0 1479 aa40.43■■■■■ 4.06
RFWD3-208ENST00000575113 TOP2AP11388 1531 aaKnown RBP40.36■■■■■ 4.05
RFWD3-208ENST00000575113 CEP164Q9UPV0 1460 aa40.32■■■■■ 4.04
RFWD3-208ENST00000575113 WDR62O43379 1518 aa40.27■■■■■ 4.04
RFWD3-208ENST00000575113 FANCD2Q9BXW9 1451 aa40.27■■■■■ 4.04
RFWD3-208ENST00000575113 CFTRP13569 1480 aa40.26■■■■■ 4.03
RFWD3-208ENST00000575113 CCDC88BA6NC98 1476 aa39.92■■■■□ 3.98
RFWD3-208ENST00000575113 URB2Q14146 1524 aaKnown RBP39.89■■■■□ 3.98
RFWD3-208ENST00000575113 PRDM2Q13029 1718 aa39.74■■■■□ 3.95
RFWD3-208ENST00000575113 OSCARQ8IYS5 282 aa39.55■■■■□ 3.92
RFWD3-208ENST00000575113 TRIM41Q8WV44 630 aa39.54■■■■□ 3.92
RFWD3-208ENST00000575113 TOPBP1Q92547 1522 aa39.5■■■■□ 3.91
RFWD3-208ENST00000575113 IFT140Q96RY7 1462 aa39.49■■■■□ 3.91
RFWD3-208ENST00000575113 ABCC8Q09428 1581 aa39.46■■■■□ 3.91
RFWD3-208ENST00000575113 ZNF608Q9ULD9 1512 aaPredicted RBP39.39■■■■□ 3.9
RFWD3-208ENST00000575113 DNMBPQ6XZF7 1577 aa39.35■■■■□ 3.89
RFWD3-208ENST00000575113 EIF4G3O43432 1585 aaKnown RBP39.15■■■■□ 3.86
RFWD3-208ENST00000575113 POLA1P09884 1462 aaPredicted RBP39.1■■■■□ 3.85
RFWD3-208ENST00000575113 AQRO60306 1485 aaKnown RBP eCLIP39.08■■■■□ 3.85
RFWD3-208ENST00000575113 TARBP1Q13395 1621 aaKnown RBP39.07■■■■□ 3.85
RFWD3-208ENST00000575113 SUPT5HO00267 1087 aaKnown RBP38.98■■■■□ 3.83
RFWD3-208ENST00000575113 SOGA1O94964 1423 aa38.97■■■■□ 3.83
RFWD3-208ENST00000575113 RAD54L2Q9Y4B4 1467 aa38.97■■■■□ 3.83
RFWD3-208ENST00000575113 FBLN2P98095 1184 aa38.91■■■■□ 3.82
RFWD3-208ENST00000575113 RIMBP3CA6NJZ7 1639 aa38.89■■■■□ 3.82
RFWD3-208ENST00000575113 RIMBP3BA6NNM3 1639 aa38.89■■■■□ 3.82
RFWD3-208ENST00000575113 RIMBP3Q9UFD9 1639 aa38.89■■■■□ 3.82
RFWD3-208ENST00000575113 TDRD9Q8NDG6 1382 aaKnown RBP38.89■■■■□ 3.82
RFWD3-208ENST00000575113 FGD5Q6ZNL6 1462 aa38.88■■■■□ 3.81
RFWD3-208ENST00000575113 CUX1P39880 1505 aa38.84■■■■□ 3.81
RFWD3-208ENST00000575113 ARHGEF11O15085 1522 aa38.83■■■■□ 3.81
RFWD3-208ENST00000575113 CHD1O14646 1710 aa38.79■■■■□ 3.8
RFWD3-208ENST00000575113 WDR97A6NE52 1622 aa38.71■■■■□ 3.79
RFWD3-208ENST00000575113 SNAPC4Q5SXM2 1469 aa38.68■■■■□ 3.78
RFWD3-208ENST00000575113 CYB5RLQ6IPT4 315 aa38.62■■■■□ 3.77
RFWD3-208ENST00000575113 CHMP7Q8WUX9 453 aaPredicted RBP38.62■■■■□ 3.77
RFWD3-208ENST00000575113 GRIN2BQ13224 1484 aa38.6■■■■□ 3.77
RFWD3-208ENST00000575113 MAGI1Q96QZ7 1491 aaPredicted RBP38.58■■■■□ 3.77
RFWD3-208ENST00000575113 GAPVD1Q14C86 1478 aa38.48■■■■□ 3.75
RFWD3-208ENST00000575113 SYNJ2O15056 1496 aa38.45■■■■□ 3.75
RFWD3-208ENST00000575113 ARAP1Q96P48 1450 aa38.44■■■■□ 3.74
RFWD3-208ENST00000575113 ABCA10Q8WWZ4 1543 aa38.43■■■■□ 3.74
RFWD3-208ENST00000575113 SYNJ1O43426 1573 aa38.43■■■■□ 3.74
RFWD3-208ENST00000575113 CLASP1Q7Z460 1538 aa38.38■■■■□ 3.74
RFWD3-208ENST00000575113 WRNQ14191 1432 aaPredicted RBP eCLIP38.37■■■■□ 3.73
RFWD3-208ENST00000575113 PBRM1Q86U86 1689 aa38.36■■■■□ 3.73
RFWD3-208ENST00000575113 ABCA5Q8WWZ7 1642 aa38.32■■■■□ 3.73
RFWD3-208ENST00000575113 TOP2BQ02880 1626 aa38.23■■■■□ 3.71
RFWD3-208ENST00000575113 BIVM-ERCC5R4GMW8 1640 aa38.21■■■■□ 3.71
RFWD3-208ENST00000575113 TRHP20396 242 aaPredicted RBP38.21■■■■□ 3.71
RFWD3-208ENST00000575113 GRIN2AQ12879 1464 aa38.09■■■■□ 3.69
RFWD3-208ENST00000575113 ADAMTS12P58397 1594 aa38.05■■■■□ 3.68
RFWD3-208ENST00000575113 FHAD1B1AJZ9 1412 aa38.01■■■■□ 3.68
RFWD3-208ENST00000575113 ERICH3Q5RHP9 1530 aa37.97■■■■□ 3.67
RFWD3-208ENST00000575113 NUP160Q12769 1436 aa37.94■■■■□ 3.66
RFWD3-208ENST00000575113 CEP170Q5SW79 1584 aa37.9■■■■□ 3.66
RFWD3-208ENST00000575113 ERCC6L2Q5T890 1561 aa37.79■■■■□ 3.64
RFWD3-208ENST00000575113 SHROOM2Q13796 1616 aa37.69■■■■□ 3.62
RFWD3-208ENST00000575113 JPH4Q96JJ6 628 aa37.63■■■■□ 3.61
RFWD3-208ENST00000575113 PRG4Q92954 1404 aaPredicted RBP37.62■■■■□ 3.61
RFWD3-208ENST00000575113 KIF27Q86VH2 1401 aa37.59■■■■□ 3.61
RFWD3-208ENST00000575113 IGF1RP08069 1367 aa37.54■■■■□ 3.6
Retrieved 100 of 20,778 RNA–protein pairs in 130.6 ms