RNA–Protein interactions for RNA: ENST00000575079.1

PSMB6-203, Transcript of proteasome subunit beta 6, humanhuman

TSL 2

Gene PSMB6, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB6-203ENST00000575079 NISCHQ9Y2I1 1504 aa34.53■■■■□ 3.12
PSMB6-203ENST00000575079 ABCC9O60706 1549 aa31.09■■■□□ 2.57
PSMB6-203ENST00000575079 CCDC180Q9P1Z9 1646 aa30.86■■■□□ 2.53
PSMB6-203ENST00000575079 RB1CC1Q8TDY2 1594 aa29.46■■■□□ 2.31
PSMB6-203ENST00000575079 DNAJC5BQ9UF47 199 aa29.37■■■□□ 2.29
PSMB6-203ENST00000575079 NACADO15069 1562 aa29.26■■■□□ 2.28
PSMB6-203ENST00000575079 DCAF8L2P0C7V8 631 aa29.22■■■□□ 2.27
PSMB6-203ENST00000575079 PABPN1Q86U42 306 aaKnown RBP eCLIP29.02■■■□□ 2.24
PSMB6-203ENST00000575079 MYO15BQ96JP2 1530 aa28.86■■■□□ 2.21
PSMB6-203ENST00000575079 UNC13AQ9UPW8 1703 aa28.74■■■□□ 2.19
PSMB6-203ENST00000575079 BICRAQ9NZM4 1560 aa28.71■■■□□ 2.19
PSMB6-203ENST00000575079 ZCCHC6Q5VYS8 1495 aaKnown RBP28.6■■■□□ 2.17
PSMB6-203ENST00000575079 DCAF1Q9Y4B6 1507 aa28.48■■■□□ 2.15
PSMB6-203ENST00000575079 SCRIBQ14160 1630 aa28.21■■■□□ 2.11
PSMB6-203ENST00000575079 SHROOM4Q9ULL8 1493 aa28.21■■■□□ 2.11
PSMB6-203ENST00000575079 CC2D2AQ9P2K1 1620 aa28.03■■■□□ 2.08
PSMB6-203ENST00000575079 CECR2Q9BXF3 1484 aa28■■■□□ 2.07
PSMB6-203ENST00000575079 EIF4G1Q04637 1599 aaKnown RBP27.97■■■□□ 2.07
PSMB6-203ENST00000575079 NCAPD3P42695 1498 aa27.1■■□□□ 1.93
PSMB6-203ENST00000575079 ATAD2BQ9ULI0 1458 aa27.02■■□□□ 1.92
PSMB6-203ENST00000575079 DNAJC5Q9H3Z4 198 aa26.91■■□□□ 1.9
PSMB6-203ENST00000575079 SMARCA4P51532 1647 aa26.9■■□□□ 1.9
PSMB6-203ENST00000575079 SMARCA2P51531 1590 aa26.84■■□□□ 1.89
PSMB6-203ENST00000575079 HMGXB3Q12766 1538 aa26.82■■□□□ 1.88
PSMB6-203ENST00000575079 ERCC6Q03468 1493 aa26.78■■□□□ 1.88
PSMB6-203ENST00000575079 CUX2O14529 1486 aa26.75■■□□□ 1.87
PSMB6-203ENST00000575079 BAZ1AQ9NRL2 1556 aaPredicted RBP26.75■■□□□ 1.87
PSMB6-203ENST00000575079 NESP48681 1621 aa26.72■■□□□ 1.87
PSMB6-203ENST00000575079 BAZ1BQ9UIG0 1483 aaKnown RBP26.69■■□□□ 1.86
PSMB6-203ENST00000575079 MROH2BQ7Z745 1585 aa26.65■■□□□ 1.86
PSMB6-203ENST00000575079 PEG3Q9GZU2 1588 aa26.65■■□□□ 1.86
PSMB6-203ENST00000575079 LAMC3Q9Y6N6 1575 aa26.41■■□□□ 1.82
PSMB6-203ENST00000575079 THOC2Q8NI27 1593 aaKnown RBP26.37■■□□□ 1.81
PSMB6-203ENST00000575079 PDS5BQ9NTI5 1447 aa26.31■■□□□ 1.8
PSMB6-203ENST00000575079 CADPSQ9ULU8 1353 aa26.29■■□□□ 1.8
PSMB6-203ENST00000575079 WIZO95785 1651 aa26.25■■□□□ 1.79
PSMB6-203ENST00000575079 KIF21AQ7Z4S6 1674 aa26.24■■□□□ 1.79
PSMB6-203ENST00000575079 RSF1Q96T23 1441 aaPredicted RBP26.1■■□□□ 1.77
PSMB6-203ENST00000575079 MRC2Q9UBG0 1479 aa26.08■■□□□ 1.77
PSMB6-203ENST00000575079 WDR62O43379 1518 aa26.02■■□□□ 1.76
PSMB6-203ENST00000575079 CFTRP13569 1480 aa25.97■■□□□ 1.75
PSMB6-203ENST00000575079 FANCD2Q9BXW9 1451 aa25.96■■□□□ 1.75
PSMB6-203ENST00000575079 CEP164Q9UPV0 1460 aa25.95■■□□□ 1.74
PSMB6-203ENST00000575079 TOP2AP11388 1531 aaKnown RBP25.91■■□□□ 1.74
PSMB6-203ENST00000575079 URB2Q14146 1524 aaKnown RBP25.78■■□□□ 1.72
PSMB6-203ENST00000575079 CCDC88BA6NC98 1476 aa25.69■■□□□ 1.7
PSMB6-203ENST00000575079 TRIM41Q8WV44 630 aa25.69■■□□□ 1.7
PSMB6-203ENST00000575079 OSCARQ8IYS5 282 aa25.58■■□□□ 1.69
PSMB6-203ENST00000575079 ZNF608Q9ULD9 1512 aaPredicted RBP25.49■■□□□ 1.67
PSMB6-203ENST00000575079 PRDM2Q13029 1718 aa25.46■■□□□ 1.67
PSMB6-203ENST00000575079 TOPBP1Q92547 1522 aa25.46■■□□□ 1.67
PSMB6-203ENST00000575079 IFT140Q96RY7 1462 aa25.45■■□□□ 1.66
PSMB6-203ENST00000575079 ABCC8Q09428 1581 aa25.32■■□□□ 1.64
PSMB6-203ENST00000575079 DNMBPQ6XZF7 1577 aa25.31■■□□□ 1.64
PSMB6-203ENST00000575079 AQRO60306 1485 aaKnown RBP eCLIP25.26■■□□□ 1.634e-8■■■■■ 43
PSMB6-203ENST00000575079 EIF4G3O43432 1585 aaKnown RBP25.24■■□□□ 1.63
PSMB6-203ENST00000575079 TARBP1Q13395 1621 aaKnown RBP25.22■■□□□ 1.63
PSMB6-203ENST00000575079 POLA1P09884 1462 aaPredicted RBP25.21■■□□□ 1.63
PSMB6-203ENST00000575079 RIMBP3CA6NJZ7 1639 aa25.19■■□□□ 1.62
PSMB6-203ENST00000575079 RIMBP3BA6NNM3 1639 aa25.19■■□□□ 1.62
PSMB6-203ENST00000575079 RIMBP3Q9UFD9 1639 aa25.19■■□□□ 1.62
PSMB6-203ENST00000575079 RAD54L2Q9Y4B4 1467 aa25.15■■□□□ 1.62
PSMB6-203ENST00000575079 ARHGEF11O15085 1522 aa25.15■■□□□ 1.62
PSMB6-203ENST00000575079 TDRD9Q8NDG6 1382 aaKnown RBP25.1■■□□□ 1.61
PSMB6-203ENST00000575079 SOGA1O94964 1423 aa25.1■■□□□ 1.61
PSMB6-203ENST00000575079 FBLN2P98095 1184 aa25.07■■□□□ 1.6
PSMB6-203ENST00000575079 FGD5Q6ZNL6 1462 aa25.03■■□□□ 1.6
PSMB6-203ENST00000575079 CYB5RLQ6IPT4 315 aa25.03■■□□□ 1.6
PSMB6-203ENST00000575079 CUX1P39880 1505 aa25.02■■□□□ 1.6
PSMB6-203ENST00000575079 CHD1O14646 1710 aa25■■□□□ 1.59
PSMB6-203ENST00000575079 SNAPC4Q5SXM2 1469 aa24.96■■□□□ 1.59
PSMB6-203ENST00000575079 ARAP1Q96P48 1450 aa24.94■■□□□ 1.58
PSMB6-203ENST00000575079 SUPT5HO00267 1087 aaKnown RBP24.9■■□□□ 1.58
PSMB6-203ENST00000575079 CHMP7Q8WUX9 453 aaPredicted RBP24.87■■□□□ 1.57
PSMB6-203ENST00000575079 WDR97A6NE52 1622 aa24.86■■□□□ 1.57
PSMB6-203ENST00000575079 GRIN2BQ13224 1484 aa24.85■■□□□ 1.57
PSMB6-203ENST00000575079 MAGI1Q96QZ7 1491 aaPredicted RBP24.83■■□□□ 1.57
PSMB6-203ENST00000575079 CLASP1Q7Z460 1538 aa24.81■■□□□ 1.56
PSMB6-203ENST00000575079 SYNJ2O15056 1496 aa24.77■■□□□ 1.56
PSMB6-203ENST00000575079 GAPVD1Q14C86 1478 aa24.77■■□□□ 1.56
PSMB6-203ENST00000575079 ABCA10Q8WWZ4 1543 aa24.74■■□□□ 1.55
PSMB6-203ENST00000575079 SYNJ1O43426 1573 aa24.72■■□□□ 1.55
PSMB6-203ENST00000575079 TRHP20396 242 aaPredicted RBP24.72■■□□□ 1.55
PSMB6-203ENST00000575079 ABCA5Q8WWZ7 1642 aa24.66■■□□□ 1.54
PSMB6-203ENST00000575079 PBRM1Q86U86 1689 aa24.64■■□□□ 1.53
PSMB6-203ENST00000575079 WRNQ14191 1432 aaPredicted RBP eCLIP24.62■■□□□ 1.53
PSMB6-203ENST00000575079 GRIN2AQ12879 1464 aa24.54■■□□□ 1.52
PSMB6-203ENST00000575079 TOP2BQ02880 1626 aa24.53■■□□□ 1.52
PSMB6-203ENST00000575079 BIVM-ERCC5R4GMW8 1640 aa24.5■■□□□ 1.51
PSMB6-203ENST00000575079 NUP160Q12769 1436 aa24.49■■□□□ 1.51
PSMB6-203ENST00000575079 ADAMTS12P58397 1594 aa24.49■■□□□ 1.51
PSMB6-203ENST00000575079 ERCC6L2Q5T890 1561 aa24.49■■□□□ 1.51
PSMB6-203ENST00000575079 CEP170Q5SW79 1584 aa24.46■■□□□ 1.51
PSMB6-203ENST00000575079 FHAD1B1AJZ9 1412 aa24.45■■□□□ 1.51
PSMB6-203ENST00000575079 ERICH3Q5RHP9 1530 aa24.39■■□□□ 1.49
PSMB6-203ENST00000575079 SHROOM2Q13796 1616 aa24.32■■□□□ 1.48
PSMB6-203ENST00000575079 JPH4Q96JJ6 628 aa24.27■■□□□ 1.48
PSMB6-203ENST00000575079 PRG4Q92954 1404 aaPredicted RBP24.26■■□□□ 1.47
PSMB6-203ENST00000575079 IGF1RP08069 1367 aa24.17■■□□□ 1.46
PSMB6-203ENST00000575079 RUSC2Q8N2Y8 1516 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms