RNA–Protein interactions for RNA: ENST00000575040.1

PKMYT1-217, Transcript of protein kinase, membrane associated tyrosine/threonine 1, humanhuman

TSL 3

Gene PKMYT1, Length 605 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKMYT1-217ENST00000575040 NISCHQ9Y2I1 1504 aa33.48■■■□□ 2.95
PKMYT1-217ENST00000575040 CCDC180Q9P1Z9 1646 aa29.96■■■□□ 2.39
PKMYT1-217ENST00000575040 ABCC9O60706 1549 aa29.56■■■□□ 2.32
PKMYT1-217ENST00000575040 RB1CC1Q8TDY2 1594 aa28.26■■■□□ 2.11
PKMYT1-217ENST00000575040 NACADO15069 1562 aa28.12■■■□□ 2.09
PKMYT1-217ENST00000575040 DCAF8L2P0C7V8 631 aa27.98■■■□□ 2.07
PKMYT1-217ENST00000575040 UNC13AQ9UPW8 1703 aa27.87■■■□□ 2.05
PKMYT1-217ENST00000575040 ZCCHC6Q5VYS8 1495 aaKnown RBP27.86■■■□□ 2.05
PKMYT1-217ENST00000575040 MYO15BQ96JP2 1530 aa27.8■■■□□ 2.04
PKMYT1-217ENST00000575040 DCAF1Q9Y4B6 1507 aa27.62■■■□□ 2.01
PKMYT1-217ENST00000575040 BICRAQ9NZM4 1560 aa27.52■■■□□ 2
PKMYT1-217ENST00000575040 PABPN1Q86U42 306 aaKnown RBP eCLIP27.51■■□□□ 1.99
PKMYT1-217ENST00000575040 SCRIBQ14160 1630 aa27.37■■□□□ 1.97
PKMYT1-217ENST00000575040 DNAJC5BQ9UF47 199 aa27.35■■□□□ 1.97
PKMYT1-217ENST00000575040 SHROOM4Q9ULL8 1493 aa27■■□□□ 1.91
PKMYT1-217ENST00000575040 EIF4G1Q04637 1599 aaKnown RBP26.76■■□□□ 1.87
PKMYT1-217ENST00000575040 CC2D2AQ9P2K1 1620 aa26.76■■□□□ 1.87
PKMYT1-217ENST00000575040 CECR2Q9BXF3 1484 aa26.54■■□□□ 1.84
PKMYT1-217ENST00000575040 SMARCA4P51532 1647 aa26.11■■□□□ 1.77
PKMYT1-217ENST00000575040 BAZ1AQ9NRL2 1556 aaPredicted RBP25.95■■□□□ 1.75
PKMYT1-217ENST00000575040 ATAD2BQ9ULI0 1458 aa25.95■■□□□ 1.74
PKMYT1-217ENST00000575040 NCAPD3P42695 1498 aa25.91■■□□□ 1.74
PKMYT1-217ENST00000575040 SMARCA2P51531 1590 aa25.88■■□□□ 1.73
PKMYT1-217ENST00000575040 MROH2BQ7Z745 1585 aa25.86■■□□□ 1.73
PKMYT1-217ENST00000575040 HMGXB3Q12766 1538 aa25.84■■□□□ 1.73
PKMYT1-217ENST00000575040 PEG3Q9GZU2 1588 aa25.79■■□□□ 1.72
PKMYT1-217ENST00000575040 BAZ1BQ9UIG0 1483 aaKnown RBP25.72■■□□□ 1.71
PKMYT1-217ENST00000575040 WIZO95785 1651 aa25.64■■□□□ 1.69
PKMYT1-217ENST00000575040 NESP48681 1621 aa25.54■■□□□ 1.68
PKMYT1-217ENST00000575040 ERCC6Q03468 1493 aa25.42■■□□□ 1.66
PKMYT1-217ENST00000575040 RSF1Q96T23 1441 aaPredicted RBP25.37■■□□□ 1.65
PKMYT1-217ENST00000575040 LAMC3Q9Y6N6 1575 aa25.35■■□□□ 1.65
PKMYT1-217ENST00000575040 KIF21AQ7Z4S6 1674 aa25.32■■□□□ 1.64
PKMYT1-217ENST00000575040 TOP2AP11388 1531 aaKnown RBP25.26■■□□□ 1.63
PKMYT1-217ENST00000575040 THOC2Q8NI27 1593 aaKnown RBP25.26■■□□□ 1.63
PKMYT1-217ENST00000575040 CUX2O14529 1486 aa25.23■■□□□ 1.63
PKMYT1-217ENST00000575040 DNAJC5Q9H3Z4 198 aa25.18■■□□□ 1.62
PKMYT1-217ENST00000575040 CADPSQ9ULU8 1353 aa25.13■■□□□ 1.61
PKMYT1-217ENST00000575040 PDS5BQ9NTI5 1447 aa25.07■■□□□ 1.6
PKMYT1-217ENST00000575040 PRDM2Q13029 1718 aa24.98■■□□□ 1.59
PKMYT1-217ENST00000575040 CFTRP13569 1480 aa24.97■■□□□ 1.59
PKMYT1-217ENST00000575040 MRC2Q9UBG0 1479 aa24.94■■□□□ 1.58
PKMYT1-217ENST00000575040 CCDC88BA6NC98 1476 aa24.92■■□□□ 1.58
PKMYT1-217ENST00000575040 FANCD2Q9BXW9 1451 aa24.92■■□□□ 1.58
PKMYT1-217ENST00000575040 WDR62O43379 1518 aa24.91■■□□□ 1.58
PKMYT1-217ENST00000575040 CEP164Q9UPV0 1460 aa24.91■■□□□ 1.58
PKMYT1-217ENST00000575040 URB2Q14146 1524 aaKnown RBP24.75■■□□□ 1.55
PKMYT1-217ENST00000575040 TOPBP1Q92547 1522 aa24.52■■□□□ 1.52
PKMYT1-217ENST00000575040 SUPT5HO00267 1087 aaKnown RBP24.5■■□□□ 1.51
PKMYT1-217ENST00000575040 DNMBPQ6XZF7 1577 aa24.48■■□□□ 1.51
PKMYT1-217ENST00000575040 ZNF608Q9ULD9 1512 aaPredicted RBP24.39■■□□□ 1.49
PKMYT1-217ENST00000575040 IFT140Q96RY7 1462 aa24.36■■□□□ 1.49
PKMYT1-217ENST00000575040 ABCC8Q09428 1581 aa24.36■■□□□ 1.49
PKMYT1-217ENST00000575040 EIF4G3O43432 1585 aaKnown RBP24.33■■□□□ 1.49
PKMYT1-217ENST00000575040 TARBP1Q13395 1621 aaKnown RBP24.33■■□□□ 1.49
PKMYT1-217ENST00000575040 POLA1P09884 1462 aaPredicted RBP24.3■■□□□ 1.48
PKMYT1-217ENST00000575040 CUX1P39880 1505 aa24.27■■□□□ 1.48
PKMYT1-217ENST00000575040 RAD54L2Q9Y4B4 1467 aa24.22■■□□□ 1.47
PKMYT1-217ENST00000575040 FGD5Q6ZNL6 1462 aa24.21■■□□□ 1.47
PKMYT1-217ENST00000575040 AQRO60306 1485 aaKnown RBP eCLIP24.16■■□□□ 1.462e-23■■■■■ 33.5
PKMYT1-217ENST00000575040 WDR97A6NE52 1622 aa24.16■■□□□ 1.46
PKMYT1-217ENST00000575040 CHD1O14646 1710 aa24.14■■□□□ 1.45
PKMYT1-217ENST00000575040 SOGA1O94964 1423 aa24.1■■□□□ 1.45
PKMYT1-217ENST00000575040 TDRD9Q8NDG6 1382 aaKnown RBP24.03■■□□□ 1.44
PKMYT1-217ENST00000575040 OSCARQ8IYS5 282 aa24.03■■□□□ 1.44
PKMYT1-217ENST00000575040 SYNJ1O43426 1573 aa24.03■■□□□ 1.44
PKMYT1-217ENST00000575040 BIVM-ERCC5R4GMW8 1640 aa24.02■■□□□ 1.44
PKMYT1-217ENST00000575040 PBRM1Q86U86 1689 aa24.02■■□□□ 1.44
PKMYT1-217ENST00000575040 TOP2BQ02880 1626 aa23.97■■□□□ 1.43
PKMYT1-217ENST00000575040 SNAPC4Q5SXM2 1469 aa23.96■■□□□ 1.43
PKMYT1-217ENST00000575040 ABCA5Q8WWZ7 1642 aa23.95■■□□□ 1.42
PKMYT1-217ENST00000575040 RIMBP3CA6NJZ7 1639 aa23.93■■□□□ 1.42
PKMYT1-217ENST00000575040 RIMBP3BA6NNM3 1639 aa23.93■■□□□ 1.42
PKMYT1-217ENST00000575040 RIMBP3Q9UFD9 1639 aa23.93■■□□□ 1.42
PKMYT1-217ENST00000575040 WRNQ14191 1432 aaPredicted RBP eCLIP23.92■■□□□ 1.42
PKMYT1-217ENST00000575040 ABCA10Q8WWZ4 1543 aa23.91■■□□□ 1.42
PKMYT1-217ENST00000575040 GRIN2BQ13224 1484 aa23.87■■□□□ 1.41
PKMYT1-217ENST00000575040 TRIM41Q8WV44 630 aa23.87■■□□□ 1.41
PKMYT1-217ENST00000575040 GAPVD1Q14C86 1478 aa23.86■■□□□ 1.41
PKMYT1-217ENST00000575040 MAGI1Q96QZ7 1491 aaPredicted RBP23.84■■□□□ 1.41
PKMYT1-217ENST00000575040 FBLN2P98095 1184 aa23.84■■□□□ 1.41
PKMYT1-217ENST00000575040 ARHGEF11O15085 1522 aa23.84■■□□□ 1.41
PKMYT1-217ENST00000575040 CLASP1Q7Z460 1538 aa23.77■■□□□ 1.4
PKMYT1-217ENST00000575040 SYNJ2O15056 1496 aa23.76■■□□□ 1.39
PKMYT1-217ENST00000575040 ADAMTS12P58397 1594 aa23.74■■□□□ 1.39
PKMYT1-217ENST00000575040 CHMP7Q8WUX9 453 aaPredicted RBP23.68■■□□□ 1.38
PKMYT1-217ENST00000575040 ARAP1Q96P48 1450 aa23.64■■□□□ 1.38
PKMYT1-217ENST00000575040 GRIN2AQ12879 1464 aa23.62■■□□□ 1.37
PKMYT1-217ENST00000575040 ERICH3Q5RHP9 1530 aa23.61■■□□□ 1.37
PKMYT1-217ENST00000575040 CEP170Q5SW79 1584 aa23.61■■□□□ 1.37
PKMYT1-217ENST00000575040 FHAD1B1AJZ9 1412 aa23.53■■□□□ 1.36
PKMYT1-217ENST00000575040 CYB5RLQ6IPT4 315 aa23.51■■□□□ 1.35
PKMYT1-217ENST00000575040 NUP160Q12769 1436 aa23.5■■□□□ 1.35
PKMYT1-217ENST00000575040 ERCC6L2Q5T890 1561 aa23.49■■□□□ 1.35
PKMYT1-217ENST00000575040 SHROOM2Q13796 1616 aa23.44■■□□□ 1.34
PKMYT1-217ENST00000575040 RUSC2Q8N2Y8 1516 aa23.41■■□□□ 1.34
PKMYT1-217ENST00000575040 CUL7Q14999 1698 aa23.41■■□□□ 1.34
PKMYT1-217ENST00000575040 KIF27Q86VH2 1401 aa23.39■■□□□ 1.33
PKMYT1-217ENST00000575040 IGF1RP08069 1367 aa23.34■■□□□ 1.33
PKMYT1-217ENST00000575040 PRG4Q92954 1404 aaPredicted RBP23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms